BLASTX 7.6.2
Query= RU24844 /QuerySize=710
(709 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G18300.1 | Symbols: | basic helix-loop-helix ... 172 2e-043
TAIR9_protein||AT2G18300.2 | Symbols: | basic helix-loop-helix ... 172 2e-043
TAIR9_protein||AT1G68920.1 | Symbols: | basic helix-loop-helix ... 164 6e-041
TAIR9_protein||AT1G68920.2 | Symbols: | basic helix-loop-helix ... 164 6e-041
TAIR9_protein||AT1G68920.3 | Symbols: | basic helix-loop-helix ... 163 2e-040
TAIR9_protein||AT4G34530.1 | Symbols: CIB1 | CIB1 (CRYPTOCHROME-... 162 3e-040
TAIR9_protein||AT1G10120.1 | Symbols: | DNA binding / transcrip... 157 9e-039
TAIR9_protein||AT1G26260.1 | Symbols: CIB5 | CIB5 (CRYPTOCHROME-... 157 9e-039
TAIR9_protein||AT1G26260.2 | Symbols: CIB5 | CIB5 (CRYPTOCHROME-... 157 9e-039
TAIR9_protein||AT1G26260.3 | Symbols: CIB5 | CIB5 (CRYPTOCHROME-... 157 9e-039
TAIR9_protein||AT3G23690.1 | Symbols: | basic helix-loop-helix ... 156 1e-038
TAIR9_protein||AT4G36540.1 | Symbols: BEE2 | BEE2 (BR Enhanced E... 156 2e-038
TAIR9_protein||AT4G36540.2 | Symbols: BEE2 | BEE2 (BR Enhanced E... 156 2e-038
TAIR9_protein||AT3G07340.1 | Symbols: | basic helix-loop-helix ... 156 2e-038
TAIR9_protein||AT5G48560.1 | Symbols: | basic helix-loop-helix ... 154 5e-038
TAIR9_protein||AT3G57800.2 | Symbols: | basic helix-loop-helix ... 149 2e-036
TAIR9_protein||AT1G59640.1 | Symbols: ZCW32, BPE, BPEUB | ZCW32;... 147 9e-036
TAIR9_protein||AT1G59640.2 | Symbols: ZCW32, BPEP | ZCW32; DNA b... 147 9e-036
TAIR9_protein||AT2G42300.1 | Symbols: | basic helix-loop-helix ... 143 1e-034
TAIR9_protein||AT5G62610.1 | Symbols: | basic helix-loop-helix ... 139 2e-033
TAIR9_protein||AT5G50915.1 | Symbols: | basic helix-loop-helix ... 139 3e-033
TAIR9_protein||AT5G50915.2 | Symbols: | basic helix-loop-helix ... 139 3e-033
TAIR9_protein||AT1G73830.1 | Symbols: BEE3 | BEE3 (BR ENHANCED E... 131 5e-031
TAIR9_protein||AT1G25330.1 | Symbols: | basic helix-loop-helix ... 125 3e-029
TAIR9_protein||AT1G18400.1 | Symbols: BEE1 | BEE1 (BR Enhanced E... 125 4e-029
TAIR9_protein||AT3G57800.1 | Symbols: | basic helix-loop-helix ... 95 3e-020
TAIR9_protein||AT5G58010.1 | Symbols: | basic helix-loop-helix ... 93 1e-019
TAIR9_protein||AT2G24260.1 | Symbols: | basic helix-loop-helix ... 92 3e-019
TAIR9_protein||AT2G42300.2 | Symbols: | basic helix-loop-helix ... 92 3e-019
TAIR9_protein||AT4G30980.1 | Symbols: | basic helix-loop-helix ... 91 8e-019
>TAIR9_protein||AT2G18300.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:7953022-7954446 REVERSE
Length = 336
Score = 172 bits (435), Expect = 2e-043
Identities = 97/185 (52%), Positives = 126/185 (68%), Gaps = 6/185 (3%)
Frame = +3
Query: 129 NISRTFSCPPKVAAETES--NNAVAPAKISSPAGKESFKKRKADKAQNNKAVAEDDSSDK 302
N + F P + + T S V ++ G+E+ +K + E+ ++K
Sbjct: 80 NYNMGFGPPHESISRTSSCHMEPVDTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEK 139
Query: 303 RMKGCAEEGDSKITEQNSTKNNDRESSADTSKENSK-ASEVQKPDYIHVRARRGQATDSH 479
++K E +++ + + + + E+S+DTSKE SK ASE QK DYIHVRARRGQATD H
Sbjct: 140 KIK---VEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRH 196
Query: 480 SLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVN 659
SLAER RREKIS++MKYLQD+VPGCNK+TGKAGMLDEIINYVQ LQRQVEFLSMKLA +N
Sbjct: 197 SLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLN 256
Query: 660 PRLDL 674
P L+L
Sbjct: 257 PELEL 261
>TAIR9_protein||AT2G18300.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:7953022-7954446 REVERSE
Length = 338
Score = 172 bits (435), Expect = 2e-043
Identities = 97/185 (52%), Positives = 126/185 (68%), Gaps = 6/185 (3%)
Frame = +3
Query: 129 NISRTFSCPPKVAAETES--NNAVAPAKISSPAGKESFKKRKADKAQNNKAVAEDDSSDK 302
N + F P + + T S V ++ G+E+ +K + E+ ++K
Sbjct: 80 NYNMGFGPPHESISRTSSCHMEPVDTMEVLLKTGEETRAVALKNKRKPEVKTREEQKTEK 139
Query: 303 RMKGCAEEGDSKITEQNSTKNNDRESSADTSKENSK-ASEVQKPDYIHVRARRGQATDSH 479
++K E +++ + + + + E+S+DTSKE SK ASE QK DYIHVRARRGQATD H
Sbjct: 140 KIK---VEAETESSMKGKSNMGNTEASSDTSKETSKGASENQKLDYIHVRARRGQATDRH 196
Query: 480 SLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVN 659
SLAER RREKIS++MKYLQD+VPGCNK+TGKAGMLDEIINYVQ LQRQVEFLSMKLA +N
Sbjct: 197 SLAERARREKISKKMKYLQDIVPGCNKVTGKAGMLDEIINYVQCLQRQVEFLSMKLAVLN 256
Query: 660 PRLDL 674
P L+L
Sbjct: 257 PELEL 261
>TAIR9_protein||AT1G68920.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:25915620-25917675 FORWARD
Length = 487
Score = 164 bits (414), Expect = 6e-041
Identities = 89/154 (57%), Positives = 110/154 (71%), Gaps = 2/154 (1%)
Frame = +3
Query: 237 KKRKADKAQNNKAVAEDDSSDKRMKGCAEEGDSKITEQNSTKNNDRESSADTSKENSKAS 416
KKRK + Q N A+ S + + GD K ++ S + ++S++ ++ ++S
Sbjct: 236 KKRKRN-GQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSG-KQQGKQSS 293
Query: 417 EVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 596
+ K YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGCNK+TGKA MLDEII
Sbjct: 294 DPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 353
Query: 597 NYVQSLQRQVEFLSMKLAAVNPRLDLTSTTCLQK 698
NYVQSLQRQVEFLSMKLA VNP++D L K
Sbjct: 354 NYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAK 387
>TAIR9_protein||AT1G68920.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:25915620-25917675 FORWARD
Length = 487
Score = 164 bits (414), Expect = 6e-041
Identities = 89/154 (57%), Positives = 110/154 (71%), Gaps = 2/154 (1%)
Frame = +3
Query: 237 KKRKADKAQNNKAVAEDDSSDKRMKGCAEEGDSKITEQNSTKNNDRESSADTSKENSKAS 416
KKRK + Q N A+ S + + GD K ++ S + ++S++ ++ ++S
Sbjct: 236 KKRKRN-GQKNSEAAQSHRSQQSEEEPDNNGDEKRNDEQSPNSPGKKSNSG-KQQGKQSS 293
Query: 417 EVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 596
+ K YIHVRARRGQAT+SHSLAERVRREKISERMK+LQDLVPGCNK+TGKA MLDEII
Sbjct: 294 DPPKDGYIHVRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEII 353
Query: 597 NYVQSLQRQVEFLSMKLAAVNPRLDLTSTTCLQK 698
NYVQSLQRQVEFLSMKLA VNP++D L K
Sbjct: 354 NYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLAK 387
>TAIR9_protein||AT1G68920.3 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:25915620-25917675 FORWARD
Length = 486
Score = 163 bits (410), Expect = 2e-040
Identities = 91/181 (50%), Positives = 122/181 (67%), Gaps = 10/181 (5%)
Frame = +3
Query: 162 VAAETESN--NAVAPAKISSPAGKESFKKRKADKAQNNKAVAEDDSSDKRMKGCAEEGDS 335
V+ +T+S+ N + SS K + ++ AQ++++ ++ D GD
Sbjct: 214 VSEDTQSSGGNGQKGRETSSNTKKRKRNGQNSEAAQSHRSQQSEEEPD-------NNGDE 266
Query: 336 KITEQNSTKNNDRESSADTSKENSKASEVQKPDYIHVRARRGQATDSHSLAERVRREKIS 515
K ++ S + ++S++ ++ ++S+ K YIHVRARRGQAT+SHSLAERVRREKIS
Sbjct: 267 KRNDEQSPNSPGKKSNSG-KQQGKQSSDPPKDGYIHVRARRGQATNSHSLAERVRREKIS 325
Query: 516 ERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDLTSTTCLQ 695
ERMK+LQDLVPGCNK+TGKA MLDEIINYVQSLQRQVEFLSMKLA VNP++D L
Sbjct: 326 ERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPQMDFNLEGLLA 385
Query: 696 K 698
K
Sbjct: 386 K 386
>TAIR9_protein||AT4G34530.1 | Symbols: CIB1 | CIB1 (CRYPTOCHROME-INTERACTING
BASIC-HELIX-LOOP-HELIX 1); DNA binding / transcription factor |
chr4:16498466-16499946 FORWARD
Length = 336
Score = 162 bits (408), Expect = 3e-040
Identities = 85/145 (58%), Positives = 105/145 (72%), Gaps = 3/145 (2%)
Frame = +3
Query: 240 KRKADKAQNNKAVAEDDSSDKRMKGCAEEGDSKITEQNSTKNNDRESSADTSKENSKAS- 416
++K N + E+ +K E+ + K+ ++ + S ++SK +
Sbjct: 105 EKKKKMTMNRDDLVEEGEEEK--SKITEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTK 162
Query: 417 EVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 596
E++K DYIHVRARRGQATDSHS+AERVRREKISERMK+LQDLVPGC+KITGKAGMLDEII
Sbjct: 163 ELEKTDYIHVRARRGQATDSHSIAERVRREKISERMKFLQDLVPGCDKITGKAGMLDEII 222
Query: 597 NYVQSLQRQVEFLSMKLAAVNPRLD 671
NYVQSLQRQ+EFLSMKLA VNPR D
Sbjct: 223 NYVQSLQRQIEFLSMKLAIVNPRPD 247
>TAIR9_protein||AT1G10120.1 | Symbols: | DNA binding / transcription factor |
chr1:3304228-3305984 REVERSE
Length = 367
Score = 157 bits (395), Expect = 9e-039
Identities = 79/126 (62%), Positives = 99/126 (78%)
Frame = +3
Query: 321 EEGDSKITEQNSTKNNDRESSADTSKENSKASEVQKPDYIHVRARRGQATDSHSLAERVR 500
+E + +Q+ K+ + +S +KE+S++ E K +YIH+RARRGQAT+SHSLAERVR
Sbjct: 165 QEDPQRGNDQSQKKHKNDQSKETVNKESSQSEEAPKENYIHMRARRGQATNSHSLAERVR 224
Query: 501 REKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDLTS 680
REKISERM+ LQ+LVPGCNKITGKA MLDEIINYVQSLQ+QVEFLSMKLA VNP +++
Sbjct: 225 REKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPEINIDI 284
Query: 681 TTCLQK 698
L K
Sbjct: 285 DRILAK 290
>TAIR9_protein||AT1G26260.1 | Symbols: CIB5 | CIB5 (CRYPTOCHROME-INTERACTING
BASIC-HELIX-LOOP-HELIX 5); DNA binding / transcription factor |
chr1:9087214-9089035 FORWARD
Length = 391
Score = 157 bits (395), Expect = 9e-039
Identities = 88/152 (57%), Positives = 107/152 (70%), Gaps = 8/152 (5%)
Frame = +3
Query: 252 DKAQNNKAVAEDDSSDKRM---KGCAEEGDSKITEQNSTKNNDRESSADTSKENSKASEV 422
D A+ + ++ SS KR K C EE D K ++ S +N A+ + + S+
Sbjct: 161 DDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSN-----ANKTNSEKQPSDS 215
Query: 423 QKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 602
K YIH+RARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA MLDEIINY
Sbjct: 216 LKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINY 275
Query: 603 VQSLQRQVEFLSMKLAAVNPRLDLTSTTCLQK 698
VQSLQ Q+EFLSMKL+AVNP LD + L K
Sbjct: 276 VQSLQCQIEFLSMKLSAVNPVLDFNLESLLAK 307
>TAIR9_protein||AT1G26260.2 | Symbols: CIB5 | CIB5 (CRYPTOCHROME-INTERACTING
BASIC-HELIX-LOOP-HELIX 5); DNA binding / transcription factor |
chr1:9087214-9089035 FORWARD
Length = 391
Score = 157 bits (395), Expect = 9e-039
Identities = 88/152 (57%), Positives = 107/152 (70%), Gaps = 8/152 (5%)
Frame = +3
Query: 252 DKAQNNKAVAEDDSSDKRM---KGCAEEGDSKITEQNSTKNNDRESSADTSKENSKASEV 422
D A+ + ++ SS KR K C EE D K ++ S +N A+ + + S+
Sbjct: 161 DDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSN-----ANKTNSEKQPSDS 215
Query: 423 QKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 602
K YIH+RARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA MLDEIINY
Sbjct: 216 LKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINY 275
Query: 603 VQSLQRQVEFLSMKLAAVNPRLDLTSTTCLQK 698
VQSLQ Q+EFLSMKL+AVNP LD + L K
Sbjct: 276 VQSLQCQIEFLSMKLSAVNPVLDFNLESLLAK 307
>TAIR9_protein||AT1G26260.3 | Symbols: CIB5 | CIB5 (CRYPTOCHROME-INTERACTING
BASIC-HELIX-LOOP-HELIX 5); DNA binding / transcription factor |
chr1:9087214-9089035 FORWARD
Length = 340
Score = 157 bits (395), Expect = 9e-039
Identities = 88/152 (57%), Positives = 107/152 (70%), Gaps = 8/152 (5%)
Frame = +3
Query: 252 DKAQNNKAVAEDDSSDKRM---KGCAEEGDSKITEQNSTKNNDRESSADTSKENSKASEV 422
D A+ + ++ SS KR K C EE D K ++ S +N A+ + + S+
Sbjct: 110 DDAKCGQTSSKGFSSKKRKRIGKDCEEEEDKKQKDEQSPTSN-----ANKTNSEKQPSDS 164
Query: 423 QKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 602
K YIH+RARRGQAT+SHSLAERVRREKISERMK+LQDLVPGC+K+TGKA MLDEIINY
Sbjct: 165 LKDGYIHMRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINY 224
Query: 603 VQSLQRQVEFLSMKLAAVNPRLDLTSTTCLQK 698
VQSLQ Q+EFLSMKL+AVNP LD + L K
Sbjct: 225 VQSLQCQIEFLSMKLSAVNPVLDFNLESLLAK 256
>TAIR9_protein||AT3G23690.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:8528933-8530655 REVERSE
Length = 372
Score = 156 bits (394), Expect = 1e-038
Identities = 92/181 (50%), Positives = 114/181 (62%), Gaps = 8/181 (4%)
Frame = +3
Query: 153 PPKVAAETESNNAVAPAKISSPAGKESFKKRKADKAQNNKAVAEDDSSDKRMKGCAEEGD 332
P V+ + + + + S P+G + +N V+ ++ K K
Sbjct: 100 PDSVSDRVHTTKSNSRKRKSIPSGNGKESPASSSLTASNSKVSGENGGSKGGK------R 153
Query: 333 SKITEQNSTKNN-DRESSADTSKENSKASEVQKPDYIHVRARRGQATDSHSLAERVRREK 509
SK S+KN ++ S +K+++K E K DYIHVRARRGQATDSHSLAER RREK
Sbjct: 154 SKQDVAGSSKNGVEKCDSKGDNKDDAKPPEAPK-DYIHVRARRGQATDSHSLAERARREK 212
Query: 510 ISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDLTSTTC 689
ISERM LQDLVPGCN+ITGKA MLDEIINYVQSLQRQVEFLSMKLA VNPR++ +
Sbjct: 213 ISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRMEFNANAS 272
Query: 690 L 692
L
Sbjct: 273 L 273
>TAIR9_protein||AT4G36540.1 | Symbols: BEE2 | BEE2 (BR Enhanced Expression 2);
DNA binding / transcription factor | chr4:17243699-17244965 FORWARD
Length = 305
Score = 156 bits (393), Expect = 2e-038
Identities = 78/120 (65%), Positives = 93/120 (77%), Gaps = 4/120 (3%)
Frame = +3
Query: 324 EGDSKITEQNSTKNNDRESSADTSKEN----SKASEVQKPDYIHVRARRGQATDSHSLAE 491
EG ++ E+ K D + K N +SE+QKPDYIHVRARRG+ATD HSLAE
Sbjct: 97 EGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAE 156
Query: 492 RVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLD 671
R RREKIS++MK LQD+VPGCNK+TGKAGMLDEIINYVQSLQ+QVEFLSMKL+ +NP L+
Sbjct: 157 RARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELE 216
>TAIR9_protein||AT4G36540.2 | Symbols: BEE2 | BEE2 (BR Enhanced Expression 2);
DNA binding / transcription factor | chr4:17243699-17244965 FORWARD
Length = 303
Score = 156 bits (393), Expect = 2e-038
Identities = 78/120 (65%), Positives = 93/120 (77%), Gaps = 4/120 (3%)
Frame = +3
Query: 324 EGDSKITEQNSTKNNDRESSADTSKEN----SKASEVQKPDYIHVRARRGQATDSHSLAE 491
EG ++ E+ K D + K N +SE+QKPDYIHVRARRG+ATD HSLAE
Sbjct: 97 EGKTEKREKKKIKAEDETEPSMKGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAE 156
Query: 492 RVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLD 671
R RREKIS++MK LQD+VPGCNK+TGKAGMLDEIINYVQSLQ+QVEFLSMKL+ +NP L+
Sbjct: 157 RARREKISKKMKCLQDIVPGCNKVTGKAGMLDEIINYVQSLQQQVEFLSMKLSVINPELE 216
>TAIR9_protein||AT3G07340.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:2341188-2343288 REVERSE
Length = 457
Score = 156 bits (392), Expect = 2e-038
Identities = 100/212 (47%), Positives = 125/212 (58%), Gaps = 4/212 (1%)
Frame = +3
Query: 66 DLSSENGWTE-LGYGSCGFEMNNISRTFSCPPKVAAETESNNAVAPAKISSPAGKESFKK 242
+LS + G+ E SC + SRT S P + N P SSP K
Sbjct: 134 ELSGDPGFAERAARFSCFGSRSFNSRTNSPFPINNEPPITTNEKMPRVSSSPVFKPLASH 193
Query: 243 RKADKAQNNKAVAEDDSSDKRMKGCAEEGDSKITEQNSTKNNDRESSADTSKENSKASEV 422
A +++ ++ + + + SK E+ + R ++ + + +K+ +
Sbjct: 194 VPA--GESSGELSRKRKTKSKQNSPSAVSSSKEIEEKEDSDPKRCKKSEENGDKTKSIDP 251
Query: 423 QKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 602
K DYIHVRARRGQATDSHSLAERVRREKISERMK LQDLVPGCNK+TGKA MLDEIINY
Sbjct: 252 YK-DYIHVRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINY 310
Query: 603 VQSLQRQVEFLSMKLAAVNPRLDLTSTTCLQK 698
VQSLQRQVEFLSMKL++VN RLD L K
Sbjct: 311 VQSLQRQVEFLSMKLSSVNTRLDFNMDALLSK 342
>TAIR9_protein||AT5G48560.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:19684160-19686871 FORWARD
Length = 499
Score = 154 bits (389), Expect = 5e-038
Identities = 95/195 (48%), Positives = 116/195 (59%), Gaps = 4/195 (2%)
Frame = +3
Query: 120 EMNNISRTFSCPPKVAAETESNNAVAPAKISSPAGKESFKK-RKADKAQNNKAVAEDDSS 296
++ +S T + V+ E + + S P GK A + + AE +
Sbjct: 194 KLTRVSSTPALKALVSPEVTPGGEFSRKRKSVPKGKSKENPISTASPSPSFSKTAEKNGG 253
Query: 297 DKRMKGCAEEGDSKITEQNSTKNNDRESSADTSKENSKASEVQKPDYIHVRARRGQATDS 476
K E+G + E+ + + E + S N+K E K DYIHVRARRGQATDS
Sbjct: 254 KGGSKSSEEKGGKRRREEEDDEEEEGEGEGNKS-NNTKPPEPPK-DYIHVRARRGQATDS 311
Query: 477 HSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAV 656
HSLAERVRREKI ERMK LQDLVPGCNK+TGKA MLDEIINYVQSLQRQVEFLSMKL++V
Sbjct: 312 HSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQVEFLSMKLSSV 371
Query: 657 N-PRLDLTSTTCLQK 698
N RLD + K
Sbjct: 372 NDTRLDFNVDALVSK 386
>TAIR9_protein||AT3G57800.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:21408034-21411321 REVERSE
Length = 380
Score = 149 bits (374), Expect = 2e-036
Identities = 92/199 (46%), Positives = 117/199 (58%), Gaps = 7/199 (3%)
Frame = +3
Query: 105 GSCGFEMNNISRTFSCPPKVAAETESNNAVAPAKISSPAGKESFKKRKADKAQNNKAVAE 284
G+ F N++ + V A + N ++ +S S A+ + AE
Sbjct: 92 GTLAFPSNSVLMERAARFSVIATEQQNGNISGETPTSSVPSNS----SANLDRVKTEPAE 147
Query: 285 DDSSDKRMKGCAEEGDSKITEQNST--KNNDRESSADTS-KENSKASEVQKPDYIHVRAR 455
DSS + + A E QN+ K D E +S K+N + E +K Y+HVRAR
Sbjct: 148 TDSSQRLISDSAIENQIPCPNQNNRNGKRKDFEKKGKSSTKKNKSSEENEKLPYVHVRAR 207
Query: 456 RGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFL 635
RGQATDSHSLAER RREKI+ RMK LQ+LVPGC+KI G A +LDEIIN+VQSLQRQVE L
Sbjct: 208 RGQATDSHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQSLQRQVEML 267
Query: 636 SMKLAAVNPRLDLTSTTCL 692
SM+LAAVNPR+D T L
Sbjct: 268 SMRLAAVNPRIDFNLDTIL 286
>TAIR9_protein||AT1G59640.1 | Symbols: ZCW32, BPE, BPEUB | ZCW32; DNA binding /
transcription factor | chr1:21909464-21911030 REVERSE
Length = 265
Score = 147 bits (369), Expect = 9e-036
Identities = 83/145 (57%), Positives = 101/145 (69%), Gaps = 10/145 (6%)
Frame = +3
Query: 240 KRKADKAQNNKAVAEDDSSDKRMKGCAEEGDSKITEQNSTKNNDRES-SADTSKENSKAS 416
KR+ D++++ K V+ +S EG++K + + + E+ S T E K
Sbjct: 76 KRREDESKSAKIVSTIGAS---------EGENKRQKIDEVCDGKAEAESLGTETEQKKQQ 126
Query: 417 EVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 596
DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEII
Sbjct: 127 MEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 186
Query: 597 NYVQSLQRQVEFLSMKLAAVNPRLD 671
NY+QSLQRQVEFLSMKL AVN R++
Sbjct: 187 NYIQSLQRQVEFLSMKLEAVNSRMN 211
>TAIR9_protein||AT1G59640.2 | Symbols: ZCW32, BPEP | ZCW32; DNA binding /
transcription factor | chr1:21909635-21911030 REVERSE
Length = 344
Score = 147 bits (369), Expect = 9e-036
Identities = 83/145 (57%), Positives = 101/145 (69%), Gaps = 10/145 (6%)
Frame = +3
Query: 240 KRKADKAQNNKAVAEDDSSDKRMKGCAEEGDSKITEQNSTKNNDRES-SADTSKENSKAS 416
KR+ D++++ K V+ +S EG++K + + + E+ S T E K
Sbjct: 76 KRREDESKSAKIVSTIGAS---------EGENKRQKIDEVCDGKAEAESLGTETEQKKQQ 126
Query: 417 EVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEII 596
DYIHVRARRGQATDSHSLAER RREKISERMK LQDLVPGCNK+ GKA +LDEII
Sbjct: 127 MEPTKDYIHVRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKALVLDEII 186
Query: 597 NYVQSLQRQVEFLSMKLAAVNPRLD 671
NY+QSLQRQVEFLSMKL AVN R++
Sbjct: 187 NYIQSLQRQVEFLSMKLEAVNSRMN 211
>TAIR9_protein||AT2G42300.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:17621542-17624635 FORWARD
Length = 328
Score = 143 bits (360), Expect = 1e-034
Identities = 79/135 (58%), Positives = 96/135 (71%), Gaps = 5/135 (3%)
Frame = +3
Query: 303 RMKGCAEEGDSKITEQN----STKNNDRESSADTS-KENSKASEVQKPDYIHVRARRGQA 467
R+K E DS + QN S K +RE +S K+N + E K Y+HVRARRGQA
Sbjct: 133 RVKAEPAETDSMVENQNQSYSSGKRKEREKKVKSSTKKNKSSVESDKLPYVHVRARRGQA 192
Query: 468 TDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKL 647
TD+HSLAER RREKI+ RMK LQ+LVPGC+KI G A +LDEIIN+VQ+LQRQVE LSM+L
Sbjct: 193 TDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQVEMLSMRL 252
Query: 648 AAVNPRLDLTSTTCL 692
AAVNPR+D + L
Sbjct: 253 AAVNPRIDFNLDSIL 267
>TAIR9_protein||AT5G62610.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:25133117-25134600 REVERSE
Length = 282
Score = 139 bits (349), Expect = 2e-033
Identities = 75/127 (59%), Positives = 87/127 (68%), Gaps = 7/127 (5%)
Frame = +3
Query: 288 DSSDKRMKGCAEE---GDSKITEQNSTKNNDRESSADTSKENSKASEVQKPDYIHVRARR 458
+S DK+ K C E GD + + T + S A K + + DYIHVRARR
Sbjct: 102 ESGDKKRKLCGSESGNGDGSMRPEGETSSGGGGSKATEQKNKPEPPK----DYIHVRARR 157
Query: 459 GQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLS 638
GQATD HSLAER RREKISE+M LQD++PGCNKI GKA +LDEIINY+QSLQRQVEFLS
Sbjct: 158 GQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQVEFLS 217
Query: 639 MKLAAVN 659
MKL VN
Sbjct: 218 MKLEVVN 224
>TAIR9_protein||AT5G50915.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:20710764-20712252 REVERSE
Length = 287
Score = 139 bits (348), Expect = 3e-033
Identities = 71/113 (62%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
Frame = +3
Query: 327 GDSKITEQNSTKNNDRESSADTSKENSKASEVQKP-DYIHVRARRGQATDSHSLAERVRR 503
G ++ + ++ N+ SK+ + S+ + P DYIHVRARRGQATDSHSLAERVRR
Sbjct: 96 GKTRGRKARNSNNSKEGVEGRKSKKQKRGSKEEPPTDYIHVRARRGQATDSHSLAERVRR 155
Query: 504 EKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNP 662
EKISERM+ LQ+LVPGC+K+TGKA MLDEIINYVQ+LQ QVEFLSMKL +++P
Sbjct: 156 EKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISP 208
>TAIR9_protein||AT5G50915.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:20710764-20712252 REVERSE
Length = 287
Score = 139 bits (348), Expect = 3e-033
Identities = 71/113 (62%), Positives = 89/113 (78%), Gaps = 1/113 (0%)
Frame = +3
Query: 327 GDSKITEQNSTKNNDRESSADTSKENSKASEVQKP-DYIHVRARRGQATDSHSLAERVRR 503
G ++ + ++ N+ SK+ + S+ + P DYIHVRARRGQATDSHSLAERVRR
Sbjct: 96 GKTRGRKARNSNNSKEGVEGRKSKKQKRGSKEEPPTDYIHVRARRGQATDSHSLAERVRR 155
Query: 504 EKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNP 662
EKISERM+ LQ+LVPGC+K+TGKA MLDEIINYVQ+LQ QVEFLSMKL +++P
Sbjct: 156 EKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQVEFLSMKLTSISP 208
>TAIR9_protein||AT1G73830.1 | Symbols: BEE3 | BEE3 (BR ENHANCED EXPRESSION 3);
DNA binding / transcription factor | chr1:27760027-27761346 FORWARD
Length = 262
Score = 131 bits (328), Expect = 5e-031
Identities = 75/151 (49%), Positives = 92/151 (60%), Gaps = 6/151 (3%)
Frame = +3
Query: 234 FKKRKADKAQNNKAVAEDDSSDKRMKGCAEEGDSKITEQNSTKNNDRESSADTSKENSKA 413
F +K + +E+ SD+ + I STKNN S+ K +
Sbjct: 83 FDTKKRKSLMEAVSTSENSVSDQTLS--TSSAQVSINGNISTKNN----SSRRGKRSKNR 136
Query: 414 SEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEI 593
E ++ + +HVRARRGQATDSHS+AERVRR KI+ER+K LQD+VPGC K G A MLDEI
Sbjct: 137 EEEKEREVVHVRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEI 196
Query: 594 INYVQSLQRQVEFLSMKLAAVNPRLDLTSTT 686
INYVQSLQ QVEFLSMKL A + D S T
Sbjct: 197 INYVQSLQNQVEFLSMKLTAASSYYDFNSET 227
>TAIR9_protein||AT1G25330.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:8880515-8882018 REVERSE
Length = 224
Score = 125 bits (313), Expect = 3e-029
Identities = 67/119 (56%), Positives = 81/119 (68%), Gaps = 1/119 (0%)
Frame = +3
Query: 327 GDSKITEQNSTKNNDRESSADTSKENSKASEVQKP-DYIHVRARRGQATDSHSLAERVRR 503
G+++ + R +E E QKP D +HVRA+RGQATDSHSLAERVRR
Sbjct: 64 GNTRRKGNKEESGSKRRRKRSEEEEAMNGDETQKPKDVVHVRAKRGQATDSHSLAERVRR 123
Query: 504 EKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSMKLAAVNPRLDLTS 680
EKI+ER+K LQDLVPGC K G A MLD II+YV+SLQ Q+EFLSMKL+A + DL S
Sbjct: 124 EKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQIEFLSMKLSAASACYDLNS 182
>TAIR9_protein||AT1G18400.1 | Symbols: BEE1 | BEE1 (BR Enhanced Expression 1);
transcription factor | chr1:6331464-6333576 FORWARD
Length = 261
Score = 125 bits (312), Expect = 4e-029
Identities = 72/145 (49%), Positives = 92/145 (63%), Gaps = 7/145 (4%)
Frame = +3
Query: 252 DKAQNNKAVAEDDSSDKRMKGCAEEGDSKITEQNSTKNNDRESSADTSKENSKASEVQKP 431
D+ + KA+ SS + G ++ + TE S + R K+ + + ++
Sbjct: 88 DETKKRKALLPTLSSSE-TSGVSDNTNVIATETGSLRRGKR------LKKKKEEEDEKER 140
Query: 432 DYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQS 611
+ +HVRARRGQATDSHSLAERVRR KI+ER++ LQD+VPGC K G A MLDEIINYVQS
Sbjct: 141 EVVHVRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQS 200
Query: 612 LQRQVEFLSMKLAAVNPRLDLTSTT 686
LQ QVEFLSMKL A + D S T
Sbjct: 201 LQNQVEFLSMKLTAASSFYDFNSET 225
>TAIR9_protein||AT3G57800.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:21408034-21411321 REVERSE
Length = 427
Score = 95 bits (235), Expect = 3e-020
Identities = 63/163 (38%), Positives = 85/163 (52%), Gaps = 7/163 (4%)
Frame = +3
Query: 105 GSCGFEMNNISRTFSCPPKVAAETESNNAVAPAKISSPAGKESFKKRKADKAQNNKAVAE 284
G+ F N++ + V A + N ++ +S S A+ + AE
Sbjct: 92 GTLAFPSNSVLMERAARFSVIATEQQNGNISGETPTSSVPSNS----SANLDRVKTEPAE 147
Query: 285 DDSSDKRMKGCAEEGDSKITEQNST--KNNDRESSADTS-KENSKASEVQKPDYIHVRAR 455
DSS + + A E QN+ K D E +S K+N + E +K Y+HVRAR
Sbjct: 148 TDSSQRLISDSAIENQIPCPNQNNRNGKRKDFEKKGKSSTKKNKSSEENEKLPYVHVRAR 207
Query: 456 RGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGML 584
RGQATDSHSLAER RREKI+ RMK LQ+LVPGC+K T G +
Sbjct: 208 RGQATDSHSLAERARREKINARMKLLQELVPGCDKGTDFGGKI 250
>TAIR9_protein||AT5G58010.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:23483670-23484889 REVERSE
Length = 298
Score = 93 bits (230), Expect = 1e-019
Identities = 55/87 (63%), Positives = 64/87 (73%), Gaps = 8/87 (9%)
Frame = +3
Query: 423 QKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGCNKITGKAGMLDEIINY 602
QKP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP NK T KA MLDEII Y
Sbjct: 95 QKP---RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEY 150
Query: 603 VQSLQRQVEFLSMK----LAAVNPRLD 671
V+ LQ QV+ LSM +V PRL+
Sbjct: 151 VRFLQLQVKVLSMSRLGGAGSVGPRLN 177
>TAIR9_protein||AT2G24260.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:10319646-10322177 REVERSE
Length = 351
Score = 92 bits (227), Expect = 3e-019
Identities = 55/106 (51%), Positives = 73/106 (68%), Gaps = 4/106 (3%)
Frame = +3
Query: 327 GDSKITEQNSTKNNDR-ESSADTSKENSKASEVQKPDYIHVRARRGQATDSHSLAERVRR 503
G + +Q T+ + ++SA T+ + A+ Q +RARRGQATD HS+AER+RR
Sbjct: 100 GGGLMNQQGQTQTQTQPQASASTATGGTVAAPPQ--SRTKIRARRGQATDPHSIAERLRR 157
Query: 504 EKISERMKYLQDLVPGCNKITGKAGMLDEIINYVQSLQRQVEFLSM 641
E+I+ERMK LQ+LVP NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 158 ERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQLQVKVLSM 202
>TAIR9_protein||AT2G42300.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:17621542-17623469 FORWARD
Length = 234
Score = 92 bits (227), Expect = 3e-019
Identities = 50/92 (54%), Positives = 62/92 (67%), Gaps = 5/92 (5%)
Frame = +3
Query: 303 RMKGCAEEGDSKITEQN----STKNNDRESSADTS-KENSKASEVQKPDYIHVRARRGQA 467
R+K E DS + QN S K +RE +S K+N + E K Y+HVRARRGQA
Sbjct: 133 RVKAEPAETDSMVENQNQSYSSGKRKEREKKVKSSTKKNKSSVESDKLPYVHVRARRGQA 192
Query: 468 TDSHSLAERVRREKISERMKYLQDLVPGCNKI 563
TD+HSLAER RREKI+ RMK LQ+LVPGC+K+
Sbjct: 193 TDNHSLAERARREKINARMKLLQELVPGCDKV 224
>TAIR9_protein||AT4G30980.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:15079489-15081606 REVERSE
Length = 311
Score = 91 bits (223), Expect = 8e-019
Identities = 52/89 (58%), Positives = 65/89 (73%), Gaps = 4/89 (4%)
Frame = +3
Query: 375 ESSADTSKENSKASEVQKPDYIHVRARRGQATDSHSLAERVRREKISERMKYLQDLVPGC 554
+++A + + A KP VRARRGQATD HS+AER+RRE+I+ERMK LQ+LVP
Sbjct: 110 QATASATTGGATAQPQTKP---KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNG 166
Query: 555 NKITGKAGMLDEIINYVQSLQRQVEFLSM 641
NK T KA MLDEII+YV+ LQ QV+ LSM
Sbjct: 167 NK-TDKASMLDEIIDYVKFLQLQVKVLSM 194
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,287,271,046
Number of Sequences: 33410
Number of Extensions: 4287271046
Number of Successful Extensions: 235057511
Number of sequences better than 0.0: 0
|