BLASTX 7.6.2
Query= RU24944 /QuerySize=251
(250 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive t... 131 8e-032
TAIR9_protein||AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive t... 131 8e-032
TAIR9_protein||AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive t... 131 8e-032
TAIR9_protein||AT5G22890.1 | Symbols: | zinc finger (C2H2 type)... 89 5e-019
TAIR9_protein||AT3G20880.1 | Symbols: | zinc finger (C2H2 type)... 53 4e-008
TAIR9_protein||AT1G51220.1 | Symbols: | zinc finger (C2H2 type)... 50 2e-007
TAIR9_protein||AT5G60470.1 | Symbols: | nucleic acid binding / ... 50 2e-007
TAIR9_protein||AT3G45260.1 | Symbols: | zinc finger (C2H2 type)... 49 5e-007
TAIR9_protein||AT1G08290.1 | Symbols: | zinc finger (C2H2 type)... 47 2e-006
TAIR9_protein||AT1G34790.1 | Symbols: TT1 | TT1 (transparent tes... 47 2e-006
TAIR9_protein||AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucle... 47 2e-006
TAIR9_protein||AT1G13290.1 | Symbols: DOT5 | DOT5 (DEFECTIVELY O... 47 3e-006
TAIR9_protein||AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING... 46 4e-006
>TAIR9_protein||AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion
binding | chr1:12551002-12552501 FORWARD
Length = 500
Score = 131 bits (329), Expect = 8e-032
Identities = 60/76 (78%), Positives = 65/76 (85%)
Frame = -3
Query: 248 SRCNTKKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPMDETK 69
SRC+TKKFSVIADLKTHEKHCGK+KWLCSCGTTFSRKDKLFGHIALFQGHTPAIP++ETK
Sbjct: 336 SRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLEETK 395
Query: 68 TTLGPSEHGEGSEAPN 21
+ S SE N
Sbjct: 396 PSASTSTQRGSSEGGN 411
>TAIR9_protein||AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion
binding | chr1:12551002-12552501 FORWARD
Length = 500
Score = 131 bits (329), Expect = 8e-032
Identities = 60/76 (78%), Positives = 65/76 (85%)
Frame = -3
Query: 248 SRCNTKKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPMDETK 69
SRC+TKKFSVIADLKTHEKHCGK+KWLCSCGTTFSRKDKLFGHIALFQGHTPAIP++ETK
Sbjct: 336 SRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLEETK 395
Query: 68 TTLGPSEHGEGSEAPN 21
+ S SE N
Sbjct: 396 PSASTSTQRGSSEGGN 411
>TAIR9_protein||AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion
binding | chr1:12551449-12552501 FORWARD
Length = 351
Score = 131 bits (329), Expect = 8e-032
Identities = 60/76 (78%), Positives = 65/76 (85%)
Frame = -3
Query: 248 SRCNTKKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPMDETK 69
SRC+TKKFSVIADLKTHEKHCGK+KWLCSCGTTFSRKDKLFGHIALFQGHTPAIP++ETK
Sbjct: 187 SRCHTKKFSVIADLKTHEKHCGKNKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPLEETK 246
Query: 68 TTLGPSEHGEGSEAPN 21
+ S SE N
Sbjct: 247 PSASTSTQRGSSEGGN 262
>TAIR9_protein||AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr5:7653541-7654662 REVERSE
Length = 374
Score = 89 bits (219), Expect = 5e-019
Identities = 36/52 (69%), Positives = 43/52 (82%)
Frame = -3
Query: 245 RCNTKKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPA 90
RC+ K FSV++DL+THEKHCG KW+CSCGT FSRKDKL H++LF GH PA
Sbjct: 310 RCSVKHFSVLSDLRTHEKHCGDIKWVCSCGTKFSRKDKLMSHVSLFLGHVPA 361
>TAIR9_protein||AT3G20880.1 | Symbols: | zinc finger (C2H2 type) protein (WIP4)
| chr3:7313759-7315792 REVERSE
Length = 413
Score = 53 bits (125), Expect = 4e-008
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Frame = -3
Query: 245 RCNTKKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALF-QGHTPAIPMD 78
RC K F+V D +THEK+CGK W CSCG+ F K L H+ F GH P +D
Sbjct: 344 RCG-KAFAVKGDWRTHEKNCGK-LWYCSCGSDFKHKRSLKDHVKAFGNGHVPCCGID 398
>TAIR9_protein||AT1G51220.1 | Symbols: | zinc finger (C2H2 type) protein (WIP5)
| chr1:18989925-18992034 REVERSE
Length = 338
Score = 50 bits (119), Expect = 2e-007
Identities = 24/48 (50%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = -3
Query: 233 KKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALF-QGHTP 93
K F+V D +THEK+CGK W CSCG+ F K L H+ F GH P
Sbjct: 269 KAFAVKGDWRTHEKNCGK-LWYCSCGSDFKHKRSLKDHVKAFGNGHVP 315
>TAIR9_protein||AT5G60470.1 | Symbols: | nucleic acid binding / transcription
factor/ zinc ion binding | chr5:24320614-24322790 FORWARD
Length = 451
Score = 50 bits (118), Expect = 2e-007
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = -3
Query: 236 TKKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGH 120
+KK++VI+D K H K CG ++ C CGT FSRKD H
Sbjct: 147 SKKYAVISDWKAHNKICGSREFRCDCGTLFSRKDSFISH 185
>TAIR9_protein||AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr3:16596850-16598550 REVERSE
Length = 447
Score = 49 bits (115), Expect = 5e-007
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = -3
Query: 236 TKKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIA 114
+KK++V++D K H K CG ++ C CGT FSRKD H A
Sbjct: 151 SKKYAVMSDWKAHSKICGTKEYRCDCGTLFSRKDSFITHRA 191
>TAIR9_protein||AT1G08290.1 | Symbols: | zinc finger (C2H2 type) protein (WIP3)
| chr1:2610680-2613180 REVERSE
Length = 338
Score = 47 bits (111), Expect = 2e-006
Identities = 23/48 (47%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = -3
Query: 233 KKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALF-QGHTP 93
K +V D +THEK+CGK W C+CG+ F K L HI F GH+P
Sbjct: 272 KALAVKGDWRTHEKNCGK-LWYCTCGSDFKHKRSLKDHIRSFGSGHSP 318
>TAIR9_protein||AT1G34790.1 | Symbols: TT1 | TT1 (transparent testa 1);
transcription factor | chr1:12763953-12765489 FORWARD
Length = 304
Score = 47 bits (110), Expect = 2e-006
Identities = 22/48 (45%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = -3
Query: 233 KKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALF-QGHTP 93
K +V D +THEK+CGK +W+C CG+ F K L H+ F GH P
Sbjct: 236 KLLAVKGDWRTHEKNCGK-RWVCVCGSDFKHKRSLKDHVKAFGSGHGP 282
>TAIR9_protein||AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding
/ protein binding / protein homodimerization/ transcription factor/
zinc ion binding | chr5:745849-748678 FORWARD
Length = 504
Score = 47 bits (110), Expect = 2e-006
Identities = 20/41 (48%), Positives = 26/41 (63%)
Frame = -3
Query: 236 TKKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIA 114
+KK++V +D K H K CG ++ C CGT FSRKD H A
Sbjct: 165 SKKYAVQSDWKAHAKTCGTREYKCDCGTLFSRKDSFITHRA 205
>TAIR9_protein||AT1G13290.1 | Symbols: DOT5 | DOT5 (DEFECTIVELY ORGANIZED
TRIBUTARIES 5); transcription factor | chr1:4550366-4551527 REVERSE
Length = 303
Score = 47 bits (109), Expect = 3e-006
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = -3
Query: 233 KKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALFQGHTPAIPMDETKTTLGP 54
K F+V D +THEK+CGK W C CG+ F K L H+ F A + + +G
Sbjct: 194 KTFAVRGDWRTHEKNCGK-LWFCVCGSDFKHKRSLKDHVRAFGDGHAAHTVSDRVVGIGD 252
Query: 53 SEHGEGSE 30
++ + E
Sbjct: 253 ADEDDEEE 260
>TAIR9_protein||AT3G57670.1 | Symbols: NTT | NTT (NO TRANSMITTING TRACT);
nucleic acid binding / transcription factor/ zinc ion binding |
chr3:21370936-21373121 FORWARD
Length = 384
Score = 46 bits (107), Expect = 4e-006
Identities = 23/46 (50%), Positives = 27/46 (58%), Gaps = 2/46 (4%)
Frame = -3
Query: 233 KKFSVIADLKTHEKHCGKDKWLCSCGTTFSRKDKLFGHIALF-QGH 99
K F+V D +THEK+CGK W C CG+ F K L HI F GH
Sbjct: 308 KAFAVRGDWRTHEKNCGK-LWYCICGSDFKHKRSLKDHIKAFGNGH 352
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,287,271,046
Number of Sequences: 33410
Number of Extensions: 4287271046
Number of Successful Extensions: 235057511
Number of sequences better than 0.0: 0
|