BLASTX 7.6.2
Query= RU24960 /QuerySize=681
(680 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G05000.1 | Symbols: | transport protein parti... 261 4e-070
>TAIR9_protein||AT3G05000.1 | Symbols: | transport protein particle (TRAPP)
component Bet3 family protein | chr3:1387444-1388697 REVERSE
Length = 174
Score = 261 bits (665), Expect = 4e-070
Identities = 123/168 (73%), Positives = 144/168 (85%), Gaps = 3/168 (1%)
Frame = +1
Query: 70 SCVDSLLTEMVSMYCNRLYANKPELAASRIDAIGYQVGHQLSERYTMERPRFTDHLDAIK 249
SCVD++L EMV+MY R YANKPELAA RI+AIGYQVGHQLSERYTMERPRF+DHL+AIK
Sbjct: 8 SCVDTMLMEMVAMYSGRFYANKPELAARRIEAIGYQVGHQLSERYTMERPRFSDHLEAIK 67
Query: 250 FICKDFWSELFKKQIDNLKTNHRGTFVLQDNRFRWLSRMSLDPSAENGDVSQENSEVSAE 429
FICKDFWSE+FKKQIDNLKTNHRGTFVLQDN+FRWLSR+S+DPS+EN ++ E
Sbjct: 68 FICKDFWSEVFKKQIDNLKTNHRGTFVLQDNKFRWLSRVSIDPSSEN---ETQDPSTPGE 124
Query: 430 NKAAQIPNMHLHFSCGVIKGALHNLGIACAVSADTSHLPACSFVVRIK 573
+KAAQ +M+L+F CG+I+G L NLGI CAVSAD S LP CSFV+R+K
Sbjct: 125 SKAAQAVSMYLYFPCGIIRGVLSNLGIPCAVSADISSLPTCSFVIRVK 172
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,287,271,046
Number of Sequences: 33410
Number of Extensions: 4287271046
Number of Successful Extensions: 235057511
Number of sequences better than 0.0: 0
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