BLASTX 7.6.2
Query= RU25040 /QuerySize=616
(615 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G03773.1 | Symbols: | FUNCTIONS IN: molecular... 204 5e-053
TAIR9_protein||AT3G03773.2 | Symbols: | FUNCTIONS IN: molecular... 202 2e-052
TAIR9_protein||AT4G02450.1 | Symbols: | glycine-rich protein | ... 106 1e-023
TAIR9_protein||AT4G02450.2 | Symbols: | glycine-rich protein | ... 106 1e-023
>TAIR9_protein||AT3G03773.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro
DOMAIN/s: CS domain (InterPro:IPR007052), HSP20-like chaperone
(InterPro:IPR008978), CS (InterPro:IPR017447); BEST Arabidopsis
thaliana protein match is: glycine-rich protein (TAIR:AT4G02450.2); Has
482 Blast hits to 482 proteins in 157 species: Archae - 0; Bacteria -
0; Metazoa - 241; Fungi - 87; Plants - 64; Viruses - 0; Other
Eukaryotes - 90 (source: NCBI BLink). | chr3:951885-953490 FORWARD
Length = 151
Score = 204 bits (517), Expect = 5e-053
Identities = 99/159 (62%), Positives = 119/159 (74%), Gaps = 8/159 (5%)
Frame = +2
Query: 80 MSRHPEVLWAQRSDKVYLTVALPDAKDISVKCEPEGVFVFSATGVQGESFHFTLELYGQI 259
MSR+PEVLWAQRSDKVYLTVALPDAKDISVKCEP+G+F FSA G QGE F F+LELYG+I
Sbjct: 1 MSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKI 60
Query: 260 LPQGCKTKAGSRNILCSIQKLNKAWWQRLLKTQEKPAPYIKVDWNNWCDEDHEPDSTSNL 439
+ + + G RNI+ SIQK ++WW RLLK++EKPAPYIKVDWN WCDED E +S +
Sbjct: 61 MTE-YRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEEVNSET-- 117
Query: 440 ASXXXXXXXXXXNIGEDDGSSEDEGMLYLPDLEKARKK* 556
+ +D SS+D+G+LYLPDLEKAR K*
Sbjct: 118 -----ASDDESAFVNQDSESSDDDGLLYLPDLEKARNK* 151
>TAIR9_protein||AT3G03773.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
endomembrane system; CONTAINS InterPro DOMAIN/s: CS domain
(InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS
(InterPro:IPR017447); BEST Arabidopsis thaliana protein match is:
glycine-rich protein (TAIR:AT4G02450.2). | chr3:951628-953490 FORWARD
Length = 205
Score = 202 bits (512), Expect = 2e-052
Identities = 98/160 (61%), Positives = 119/160 (74%), Gaps = 8/160 (5%)
Frame = +2
Query: 77 QMSRHPEVLWAQRSDKVYLTVALPDAKDISVKCEPEGVFVFSATGVQGESFHFTLELYGQ 256
+M R+PEVLWAQRSDKVYLTVALPDAKDISVKCEP+G+F FSA G QGE F F+LELYG+
Sbjct: 54 RMIRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGK 113
Query: 257 ILPQGCKTKAGSRNILCSIQKLNKAWWQRLLKTQEKPAPYIKVDWNNWCDEDHEPDSTSN 436
I+ + + G RNI+ SIQK ++WW RLLK++EKPAPYIKVDWN WCDED E +S +
Sbjct: 114 IMTE-YRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEEVNSET- 171
Query: 437 LASXXXXXXXXXXNIGEDDGSSEDEGMLYLPDLEKARKK* 556
+ +D SS+D+G+LYLPDLEKAR K*
Sbjct: 172 ------ASDDESAFVNQDSESSDDDGLLYLPDLEKARNK* 205
>TAIR9_protein||AT4G02450.1 | Symbols: | glycine-rich protein |
chr4:1073987-1075765 REVERSE
Length = 242
Score = 106 bits (264), Expect = 1e-023
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 2/114 (1%)
Frame = +2
Query: 80 MSRHPEVLWAQRSDKVYLTVALPDAKDISVKCEPEGVFVFSA-TGVQGESFHFTLELYGQ 256
MSRHPEV WA+ ++K++LTV L D KD V +PEGVF FSA G + + LEL +
Sbjct: 1 MSRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADK 60
Query: 257 ILPQGCKTKAGSRNILCSIQKLNKAWWQRLLKTQEKPAPYIKVDWNNWCDEDHE 418
+ + K G R+I C I+K W +LL+ +KP Y+KVDW+ W DED E
Sbjct: 61 VNVEESKINIGERSIFCIIEKAEPERWNKLLRV-KKPPHYVKVDWDKWVDEDDE 113
>TAIR9_protein||AT4G02450.2 | Symbols: | glycine-rich protein |
chr4:1073987-1075765 REVERSE
Length = 241
Score = 106 bits (264), Expect = 1e-023
Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 2/114 (1%)
Frame = +2
Query: 80 MSRHPEVLWAQRSDKVYLTVALPDAKDISVKCEPEGVFVFSA-TGVQGESFHFTLELYGQ 256
MSRHPEV WA+ ++K++LTV L D KD V +PEGVF FSA G + + LEL +
Sbjct: 1 MSRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADK 60
Query: 257 ILPQGCKTKAGSRNILCSIQKLNKAWWQRLLKTQEKPAPYIKVDWNNWCDEDHE 418
+ + K G R+I C I+K W +LL+ +KP Y+KVDW+ W DED E
Sbjct: 61 VNVEESKINIGERSIFCIIEKAEPERWNKLLRV-KKPPHYVKVDWDKWVDEDDE 113
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,287,271,046
Number of Sequences: 33410
Number of Extensions: 4287271046
Number of Successful Extensions: 235057511
Number of sequences better than 0.0: 0
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