BLASTX 7.6.2 Query= RU25040 /QuerySize=616 (615 letters) Database: TAIR9 protein; 33,410 sequences; 13,468,323 total letters Score E Sequences producing significant alignments: (bits) Value TAIR9_protein||AT3G03773.1 | Symbols: | FUNCTIONS IN: molecular... 204 5e-053 TAIR9_protein||AT3G03773.2 | Symbols: | FUNCTIONS IN: molecular... 202 2e-052 TAIR9_protein||AT4G02450.1 | Symbols: | glycine-rich protein | ... 106 1e-023 TAIR9_protein||AT4G02450.2 | Symbols: | glycine-rich protein | ... 106 1e-023 >TAIR9_protein||AT3G03773.1 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; CONTAINS InterPro DOMAIN/s: CS domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G02450.2); Has 482 Blast hits to 482 proteins in 157 species: Archae - 0; Bacteria - 0; Metazoa - 241; Fungi - 87; Plants - 64; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink). | chr3:951885-953490 FORWARD Length = 151 Score = 204 bits (517), Expect = 5e-053 Identities = 99/159 (62%), Positives = 119/159 (74%), Gaps = 8/159 (5%) Frame = +2 Query: 80 MSRHPEVLWAQRSDKVYLTVALPDAKDISVKCEPEGVFVFSATGVQGESFHFTLELYGQI 259 MSR+PEVLWAQRSDKVYLTVALPDAKDISVKCEP+G+F FSA G QGE F F+LELYG+I Sbjct: 1 MSRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGKI 60 Query: 260 LPQGCKTKAGSRNILCSIQKLNKAWWQRLLKTQEKPAPYIKVDWNNWCDEDHEPDSTSNL 439 + + + G RNI+ SIQK ++WW RLLK++EKPAPYIKVDWN WCDED E +S + Sbjct: 61 MTE-YRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEEVNSET-- 117 Query: 440 ASXXXXXXXXXXNIGEDDGSSEDEGMLYLPDLEKARKK* 556 + +D SS+D+G+LYLPDLEKAR K* Sbjct: 118 -----ASDDESAFVNQDSESSDDDGLLYLPDLEKARNK* 151 >TAIR9_protein||AT3G03773.2 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: CS domain (InterPro:IPR007052), HSP20-like chaperone (InterPro:IPR008978), CS (InterPro:IPR017447); BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G02450.2). | chr3:951628-953490 FORWARD Length = 205 Score = 202 bits (512), Expect = 2e-052 Identities = 98/160 (61%), Positives = 119/160 (74%), Gaps = 8/160 (5%) Frame = +2 Query: 77 QMSRHPEVLWAQRSDKVYLTVALPDAKDISVKCEPEGVFVFSATGVQGESFHFTLELYGQ 256 +M R+PEVLWAQRSDKVYLTVALPDAKDISVKCEP+G+F FSA G QGE F F+LELYG+ Sbjct: 54 RMIRNPEVLWAQRSDKVYLTVALPDAKDISVKCEPQGLFSFSALGAQGERFEFSLELYGK 113 Query: 257 ILPQGCKTKAGSRNILCSIQKLNKAWWQRLLKTQEKPAPYIKVDWNNWCDEDHEPDSTSN 436 I+ + + G RNI+ SIQK ++WW RLLK++EKPAPYIKVDWN WCDED E +S + Sbjct: 114 IMTE-YRKNVGLRNIIFSIQKEERSWWTRLLKSEEKPAPYIKVDWNKWCDEDEEVNSET- 171 Query: 437 LASXXXXXXXXXXNIGEDDGSSEDEGMLYLPDLEKARKK* 556 + +D SS+D+G+LYLPDLEKAR K* Sbjct: 172 ------ASDDESAFVNQDSESSDDDGLLYLPDLEKARNK* 205 >TAIR9_protein||AT4G02450.1 | Symbols: | glycine-rich protein | chr4:1073987-1075765 REVERSE Length = 242 Score = 106 bits (264), Expect = 1e-023 Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 2/114 (1%) Frame = +2 Query: 80 MSRHPEVLWAQRSDKVYLTVALPDAKDISVKCEPEGVFVFSA-TGVQGESFHFTLELYGQ 256 MSRHPEV WA+ ++K++LTV L D KD V +PEGVF FSA G + + LEL + Sbjct: 1 MSRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADK 60 Query: 257 ILPQGCKTKAGSRNILCSIQKLNKAWWQRLLKTQEKPAPYIKVDWNNWCDEDHE 418 + + K G R+I C I+K W +LL+ +KP Y+KVDW+ W DED E Sbjct: 61 VNVEESKINIGERSIFCIIEKAEPERWNKLLRV-KKPPHYVKVDWDKWVDEDDE 113 >TAIR9_protein||AT4G02450.2 | Symbols: | glycine-rich protein | chr4:1073987-1075765 REVERSE Length = 241 Score = 106 bits (264), Expect = 1e-023 Identities = 52/114 (45%), Positives = 70/114 (61%), Gaps = 2/114 (1%) Frame = +2 Query: 80 MSRHPEVLWAQRSDKVYLTVALPDAKDISVKCEPEGVFVFSA-TGVQGESFHFTLELYGQ 256 MSRHPEV WA+ ++K++LTV L D KD V +PEGVF FSA G + + LEL + Sbjct: 1 MSRHPEVKWAETTEKIFLTVVLADTKDTKVNLDPEGVFDFSAKVGPENHVYELKLELADK 60 Query: 257 ILPQGCKTKAGSRNILCSIQKLNKAWWQRLLKTQEKPAPYIKVDWNNWCDEDHE 418 + + K G R+I C I+K W +LL+ +KP Y+KVDW+ W DED E Sbjct: 61 VNVEESKINIGERSIFCIIEKAEPERWNKLLRV-KKPPHYVKVDWDKWVDEDDE 113 Database: TAIR9 protein Posted date: Wed Jul 08 15:16:08 2009 Number of letters in database: 13,468,323 Number of sequences in database: 33,410 Lambda K H 0.267 0.041 0.140 Gapped Lambda K H 0.267 0.041 0.140 Matrix: blosum62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,287,271,046 Number of Sequences: 33410 Number of Extensions: 4287271046 Number of Successful Extensions: 235057511 Number of sequences better than 0.0: 0 |