BLASTX 7.6.2
Query= RU25080 /QuerySize=618
(617 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-l... 265 2e-071
TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a... 252 1e-067
TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a... 252 1e-067
TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription... 235 2e-062
TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-L... 217 6e-057
TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIK... 176 2e-044
TAIR9_protein||AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SC... 107 5e-024
TAIR9_protein||AT2G29060.1 | Symbols: | scarecrow transcription... 104 4e-023
TAIR9_protein||AT5G59450.1 | Symbols: | scarecrow-like transcri... 101 5e-022
TAIR9_protein||AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transc... 100 8e-022
TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELL... 99 2e-021
TAIR9_protein||AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); ... 95 3e-020
TAIR9_protein||AT2G37650.1 | Symbols: | scarecrow-like transcri... 94 4e-020
TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSO... 94 6e-020
TAIR9_protein||AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW... 94 8e-020
TAIR9_protein||AT3G46600.1 | Symbols: | scarecrow transcription... 92 2e-019
TAIR9_protein||AT3G46600.2 | Symbols: | scarecrow transcription... 92 2e-019
TAIR9_protein||AT3G46600.3 | Symbols: | scarecrow transcription... 92 2e-019
TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROT... 89 2e-018
TAIR9_protein||AT1G07520.1 | Symbols: | scarecrow transcription... 88 3e-018
TAIR9_protein||AT1G63100.1 | Symbols: | scarecrow transcription... 80 1e-015
TAIR9_protein||AT4G08250.1 | Symbols: | scarecrow transcription... 76 1e-014
TAIR9_protein||AT5G41920.1 | Symbols: | scarecrow transcription... 68 3e-012
>TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-like 13);
transcription factor | chr4:9661218-9662807 REVERSE
Length = 530
Score = 265 bits (676), Expect = 2e-071
Identities = 129/205 (62%), Positives = 161/205 (78%)
Frame = +3
Query: 3 SEEDMYAAANCMEVLGHMVSVSGEPMERLGAYMLEGLRARLERSGSMIYKTLKCEVPTSE 182
++ D A ++VL MVSVSG P++RLG YM EGLRARLE SGS IYK+LKC PT
Sbjct: 167 ADGDFATAYGFLDVLEQMVSVSGSPIQRLGTYMAEGLRARLEGSGSNIYKSLKCNEPTGR 226
Query: 183 ELMTYMSILYRICPYWKFAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQ 362
ELM+YMS+LY ICPYWKFAY ++NV I EA+ E RV IIDFQIAQG+Q++ LIQ LA +
Sbjct: 227 ELMSYMSVLYEICPYWKFAYTTANVEILEAIAGETRVHIIDFQIAQGSQYMFLIQELAKR 286
Query: 363 PGGPPLIRITGVDDTQSNHARGGGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVELENL 542
PGGPPL+R+TGVDD+QS +ARGGGL +VG+RL+ +A V FEF+ A MSGC+V+ E+L
Sbjct: 287 PGGPPLLRVTGVDDSQSTYARGGGLSLVGERLATLAQSCGVPFEFHDAIMSGCKVQREHL 346
Query: 543 RIQPGEAIAVTFPFVLHHMPDESVS 617
++PG A+ V FP+VLHHMPDESVS
Sbjct: 347 GLEPGFAVVVNFPYVLHHMPDESVS 371
>TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 252 bits (643), Expect = 1e-067
Identities = 127/206 (61%), Positives = 158/206 (76%), Gaps = 1/206 (0%)
Frame = +3
Query: 3 SEEDMYAAANCMEVLGHMVSVSGEPMERLGAYMLEGLRARLERSGSMIYKTL-KCEVPTS 179
SE D+ A + ME L MVSVSGEP++RLGAY+LEGL A+L SGS IYK L +C P S
Sbjct: 131 SENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPAS 190
Query: 180 EELMTYMSILYRICPYWKFAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLAC 359
EL++YM ILY +CPY+KF Y+S+N I EA+ E RV IIDFQI QG+QWV LIQ A
Sbjct: 191 TELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAA 250
Query: 360 QPGGPPLIRITGVDDTQSNHARGGGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVELEN 539
+PGGPP IRITG+DD S +ARGGGL IVG RL+++A ++NV FEFN+ ++S EV+ +N
Sbjct: 251 RPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKN 310
Query: 540 LRIQPGEAIAVTFPFVLHHMPDESVS 617
L ++PGEA+AV F FVLHHMPDESVS
Sbjct: 311 LGVRPGEALAVNFAFVLHHMPDESVS 336
>TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 252 bits (643), Expect = 1e-067
Identities = 127/206 (61%), Positives = 158/206 (76%), Gaps = 1/206 (0%)
Frame = +3
Query: 3 SEEDMYAAANCMEVLGHMVSVSGEPMERLGAYMLEGLRARLERSGSMIYKTL-KCEVPTS 179
SE D+ A + ME L MVSVSGEP++RLGAY+LEGL A+L SGS IYK L +C P S
Sbjct: 131 SENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKALNRCPEPAS 190
Query: 180 EELMTYMSILYRICPYWKFAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLAC 359
EL++YM ILY +CPY+KF Y+S+N I EA+ E RV IIDFQI QG+QWV LIQ A
Sbjct: 191 TELLSYMHILYEVCPYFKFGYMSANGAIAEAMKEENRVHIIDFQIGQGSQWVTLIQAFAA 250
Query: 360 QPGGPPLIRITGVDDTQSNHARGGGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVELEN 539
+PGGPP IRITG+DD S +ARGGGL IVG RL+++A ++NV FEFN+ ++S EV+ +N
Sbjct: 251 RPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLAKQFNVPFEFNSVSVSVSEVKPKN 310
Query: 540 LRIQPGEAIAVTFPFVLHHMPDESVS 617
L ++PGEA+AV F FVLHHMPDESVS
Sbjct: 311 LGVRPGEALAVNFAFVLHHMPDESVS 336
>TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor |
chr1:18737398-18739547 REVERSE
Length = 598
Score = 235 bits (598), Expect = 2e-062
Identities = 118/191 (61%), Positives = 144/191 (75%)
Frame = +3
Query: 45 LGHMVSVSGEPMERLGAYMLEGLRARLERSGSMIYKTLKCEVPTSEELMTYMSILYRICP 224
L MVSVSGEP++RLGAYMLEGL ARL SGS IYK L+C+ PT EL+TYM ILY CP
Sbjct: 253 LQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKALRCKDPTGPELLTYMHILYEACP 312
Query: 225 YWKFAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQPGGPPLIRITGVDD 404
Y+KF Y S+N I EA+ NE V IIDFQI+QG QWV LI+ L +PGGPP +RITG+DD
Sbjct: 313 YFKFGYESANGAIAEAVKNESFVHIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDD 372
Query: 405 TQSNHARGGGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVELENLRIQPGEAIAVTFPF 584
+S+ AR GGL +VG+RL ++A V FEF+ AA+ EVE+E L ++ GEA+AV FP
Sbjct: 373 PRSSFARQGGLELVGQRLGKLAEMCGVPFEFHGAALCCTEVEIEKLGVRNGEALAVNFPL 432
Query: 585 VLHHMPDESVS 617
VLHHMPDESV+
Sbjct: 433 VLHHMPDESVT 443
>TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21);
transcription factor | chr2:1720575-1721816 REVERSE
Length = 414
Score = 217 bits (551), Expect = 6e-057
Identities = 110/205 (53%), Positives = 144/205 (70%), Gaps = 7/205 (3%)
Frame = +3
Query: 3 SEEDMYAAANCMEVLGHMVSVSGEPMERLGAYMLEGLRARLERSGSMIYKTLKCEVPTSE 182
SE ++ A CM L MVS+SGEP++RLGAYMLEGL ARL SGS IYK+L+ P S
Sbjct: 62 SENNLLMARWCMGELRGMVSISGEPIQRLGAYMLEGLVARLAASGSSIYKSLQSREPESY 121
Query: 183 ELMTYMSILYRICPYWKFAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQ 362
E ++Y+ +L+ +CPY+KF Y+S+N I EA+ +E R+ IIDFQI QG+QW+ LIQ A +
Sbjct: 122 EFLSYVYVLHEVCPYFKFGYMSANGAIAEAMKDEERIHIIDFQIGQGSQWIALIQAFAAR 181
Query: 363 PGGPPLIRITGVDDTQSNHARGGGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVELENL 542
PGG P IRITGV D G L V KRL ++A K++V F FNA + CEVE+ENL
Sbjct: 182 PGGAPNIRITGVGD-------GSVLVTVKKRLEKLAKKFDVPFRFNAVSRPSCEVEVENL 234
Query: 543 RIQPGEAIAVTFPFVLHHMPDESVS 617
++ GEA+ V F ++LHH+PDESVS
Sbjct: 235 DVRDGEALGVNFAYMLHHLPDESVS 259
>TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1);
transcription factor | chr1:7509721-7511502 FORWARD
Length = 594
Score = 176 bits (444), Expect = 2e-044
Identities = 89/205 (43%), Positives = 126/205 (61%)
Frame = +3
Query: 3 SEEDMYAAANCMEVLGHMVSVSGEPMERLGAYMLEGLRARLERSGSMIYKTLKCEVPTSE 182
SE + A + + L +VS+ G+P +R+ AYM+EGL AR+ SG IY+ LKC+ P S+
Sbjct: 234 SEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIYRALKCKEPPSD 293
Query: 183 ELMTYMSILYRICPYWKFAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQ 362
E + M +L+ +CP +KF +L++N I EA+ E V IIDF I QG Q++ LI+ +A
Sbjct: 294 ERLAAMQVLFEVCPCFKFGFLAANGAILEAIKGEEEVHIIDFDINQGNQYMTLIRSIAEL 353
Query: 363 PGGPPLIRITGVDDTQSNHARGGGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVELENL 542
PG P +R+TG+DD +S GGL I+G RL ++A V F+F A V L
Sbjct: 354 PGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQLAEDNGVSFKFKAMPSKTSIVSPSTL 413
Query: 543 RIQPGEAIAVTFPFVLHHMPDESVS 617
+PGE + V F F LHHMPDESV+
Sbjct: 414 GCKPGETLIVNFAFQLHHMPDESVT 438
>TAIR9_protein||AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCL14
(SCARECROW-LIKE 14); transcription factor | chr1:2313828-2316137
REVERSE
Length = 770
Score = 107 bits (267), Expect = 5e-024
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 1/205 (0%)
Frame = +3
Query: 3 SEEDMYAAANCMEVLGHMVSVSGEPMERLGAYMLEGLRARLERSGSMIYKTLKCEVPTSE 182
S +D A + + S G ERL Y L ARL +G+ IY L + ++
Sbjct: 405 SVDDRRTANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGTQIYTALSSKKTSAA 464
Query: 183 ELMTYMSILYRICPYWKFAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLA-C 359
+++ +CP+ K A + +N + N + IIDF I+ G QW LI L+
Sbjct: 465 DMLKAYQTYMSVCPFKKAAIIFANHSMMRFTANANTIHIIDFGISYGFQWPALIHRLSLS 524
Query: 360 QPGGPPLIRITGVDDTQSNHARGGGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVELEN 539
+PGG P +RITG++ Q G+ G RL+ ++NV FE+NA A +++E+
Sbjct: 525 RPGGSPKLRITGIELPQRGFRPAEGVQETGHRLARYCQRHNVPFEYNAIAQKWETIQVED 584
Query: 540 LRIQPGEAIAVTFPFVLHHMPDESV 614
L+++ GE + V F ++ DE+V
Sbjct: 585 LKLRQGEYVVVNSLFRFRNLLDETV 609
>TAIR9_protein||AT2G29060.1 | Symbols: | scarecrow transcription factor family
protein | chr2:12481991-12486941 FORWARD
Length = 1337
Score = 104 bits (259), Expect = 4e-023
Identities = 58/185 (31%), Positives = 98/185 (52%), Gaps = 2/185 (1%)
Frame = +3
Query: 69 GEPMERLGAYMLEGLRARLERSGSMIYKTLKCEVPTSEELMTYMSILYRICPYWKFAYLS 248
G+ ERL Y L ARL G+ +Y L + ++ +++ +CP+ K A +
Sbjct: 352 GDGTERLAHYFANSLEARLAGIGTQVYTALSSKKTSTSDMLKAYQTYISVCPFKKIAIIF 411
Query: 249 SN--VVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQPGGPPLIRITGVDDTQSNHA 422
+N ++ + N + IIDF I+ G QW LI LA + G +RITG++ Q
Sbjct: 412 ANHSIMRLASSANAKTIHIIDFGISDGFQWPSLIHRLAWRRGSSCKLRITGIELPQRGFR 471
Query: 423 RGGGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVELENLRIQPGEAIAVTFPFVLHHMP 602
G+ G+RL++ K+N+ FE+NA A ++LE+L+++ GE +AV F ++
Sbjct: 472 PAEGVIETGRRLAKYCQKFNIPFEYNAIAQKWESIKLEDLKLKEGEFVAVNSLFRFRNLL 531
Query: 603 DESVS 617
DE+V+
Sbjct: 532 DETVA 536
Score = 76 bits (185), Expect = 2e-014
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 6/189 (3%)
Frame = +3
Query: 69 GEPMERLGAYMLEGLRARLERS-GSMI---YKTLKCEV-PTSEELMTYMSILYRICPYWK 233
G+ +RL L ARL+ S G MI Y L + T+ + + + P+
Sbjct: 989 GDAGQRLAHCFANALEARLQGSTGPMIQTYYNALTSSLKDTAADTIRAYRVYLSSSPFVT 1048
Query: 234 FAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQPGGPPLIRITGVDDTQS 413
Y S +I + + P + I+DF I G QW IQ ++ + P +RITG++ Q
Sbjct: 1049 LMYFFSIWMILDVAKDAPVLHIVDFGILYGFQWPMFIQSISDRKDVPRKLRITGIELPQC 1108
Query: 414 NHARGGGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCE-VELENLRIQPGEAIAVTFPFVL 590
+ G+RL+E ++NV FE+ A A E + +E+L I+P E +AV L
Sbjct: 1109 GFRPAERIEETGRRLAEYCKRFNVPFEYKAIASQNWETIRIEDLDIRPNEVLAVNAGLRL 1168
Query: 591 HHMPDESVS 617
++ DE+ S
Sbjct: 1169 KNLQDETGS 1177
>TAIR9_protein||AT5G59450.1 | Symbols: | scarecrow-like transcription factor 11
(SCL11) | chr5:23974808-23976640 FORWARD
Length = 611
Score = 101 bits (250), Expect = 5e-022
Identities = 58/194 (29%), Positives = 96/194 (49%), Gaps = 2/194 (1%)
Frame = +3
Query: 39 EVLGHMVSVSGEPMERLGAYMLEGLRARLERSGS-MIYKTLKCEVPTSEELMTYMSILYR 215
E+ H S +G+ +RL Y E L AR+ + S + + +++ +
Sbjct: 249 EIRAHS-SSNGDGTQRLAFYFAEALEARITGNISPPVSNPFPSSTTSMVDILKAYKLFVH 307
Query: 216 ICPYWKFAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQPGGPPLIRITG 395
CP + Y ++N I E + ++ I+DF + G QW L++ L+ +PGGPP++R+TG
Sbjct: 308 TCPIYVTDYFAANKSIYELAMKATKLHIVDFGVLYGFQWPCLLRALSKRPGGPPMLRVTG 367
Query: 396 VDDTQSNHARGGGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVELENLRIQPGEAIAVT 575
++ Q+ + G+RL ++NV FEFN A + L+ L I PGE V
Sbjct: 368 IELPQAGFRPSDRVEETGRRLKRFCDQFNVPFEFNFIAKKWETITLDELMINPGETTVVN 427
Query: 576 FPFVLHHMPDESVS 617
L + PDE+VS
Sbjct: 428 CIHRLQYTPDETVS 441
>TAIR9_protein||AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transcription factor
| chr1:18678177-18679625 REVERSE
Length = 483
Score = 100 bits (248), Expect = 8e-022
Identities = 64/190 (33%), Positives = 97/190 (51%), Gaps = 11/190 (5%)
Frame = +3
Query: 36 MEVLGHMVSVSGEPMERLGAYMLEGLRARLERSGSMIYKTLKCEVP----TSEELMTYMS 203
+E L H+ S G+ M+R+ AY E L R+ +S +YK L SEE+
Sbjct: 77 LEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKALNATQTRTNNVSEEIHV-RR 135
Query: 204 ILYRICPYWKFAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQPGGPPLI 383
+ + + P K +YL +N I EA+ E V +ID ++ QW+ L+Q +P GPP +
Sbjct: 136 LFFEMFPILKVSYLLTNRAILEAMEGEKMVHVIDLDASEPAQWLALLQAFNSRPEGPPHL 195
Query: 384 RITGVDDTQSNHARGGGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVELENLRIQPGEA 563
RITGV H + L + RL E A K ++ F+FN + +E LR++ GEA
Sbjct: 196 RITGV------HHQKEVLEQMAHRLIEEAEKLDIPFQFNPVVSRLDCLNVEQLRVKTGEA 249
Query: 564 IAVTFPFVLH 593
+AV+ LH
Sbjct: 250 LAVSSVLQLH 259
>TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELLIC ACID
INSENSITIVE); transcription factor | chr1:5149414-5151015 FORWARD
Length = 534
Score = 99 bits (244), Expect = 2e-021
Identities = 64/202 (31%), Positives = 100/202 (49%), Gaps = 13/202 (6%)
Frame = +3
Query: 6 EEDMYAAANCMEVLGHMVSVSGEPMERLGAYMLEGLRARLERSGSMIYKTLKCEVPTSEE 185
+E++ A ++ +G + M ++ Y E L R IY+ + P
Sbjct: 182 KENLTVAEALVKQIGFLAVSQIGAMRKVATYFAEALARR-------IYRLSPSQSPIDHS 234
Query: 186 LM-TYMSILYRICPYWKFAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQ 362
L T Y CPY KFA+ ++N I EA + RV +IDF ++QG QW L+Q LA +
Sbjct: 235 LSDTLQMHFYETCPYLKFAHFTANQAILEAFQGKKRVHVIDFSMSQGLQWPALMQALALR 294
Query: 363 PGGPPLIRITGVDDTQSNHARGGGLHIVGKRLSEVAAKYNVRFE---FNAAAMSGCEVEL 533
PGGPP+ R+TG+ ++ LH VG +L+ +A +V FE F A ++ + +
Sbjct: 295 PGGPPVFRLTGIGPPAPDNF--DYLHEVGCKLAHLAEAIHVEFEYRGFVANTLADLDASM 352
Query: 534 ENLRIQPGEAIAVTFPFVLHHM 599
LR E++AV F LH +
Sbjct: 353 LELRPSEIESVAVNSVFELHKL 374
>TAIR9_protein||AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); transcription
factor | chr3:819636-821279 REVERSE
Length = 548
Score = 95 bits (235), Expect = 3e-020
Identities = 62/200 (31%), Positives = 99/200 (49%), Gaps = 6/200 (3%)
Frame = +3
Query: 6 EEDMYAAANCMEVLGHMVSVSGEPMERLGAYMLEGLRARLERSGSMIYKTLKCEVPTSEE 185
+E++ A ++ +G + M ++ Y + L R+ R + P+ EE
Sbjct: 193 QENLNLADALVKRVGTLAGSQAGAMGKVATYFAQALARRIYRDYTAETDVCAAVNPSFEE 252
Query: 186 LMTYMSILYRICPYWKFAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQP 365
++ Y CPY KFA+ ++N I EA+ RV +ID + QG QW L+Q LA +P
Sbjct: 253 VLEMH--FYESCPYLKFAHFTANQAILEAVTTARRVHVIDLGLNQGMQWPALMQALALRP 310
Query: 366 GGPPLIRITGVDDTQSNHARGGGLHIVGKRLSEVAAKYNVRFEFNA-AAMSGCEVELENL 542
GGPP R+TG+ Q+ ++ L +G +L++ A V FEF AA S ++E E
Sbjct: 311 GGPPSFRLTGIGPPQTENS--DSLQQLGWKLAQFAQNMGVEFEFKGLAAESLSDLEPEMF 368
Query: 543 RIQP-GEAIAVTFPFVLHHM 599
+P E + V F LH +
Sbjct: 369 ETRPESETLVVNSVFELHRL 388
>TAIR9_protein||AT2G37650.1 | Symbols: | scarecrow-like transcription factor 9
(SCL9) | chr2:15792623-15794779 FORWARD
Length = 719
Score = 94 bits (233), Expect = 4e-020
Identities = 58/182 (31%), Positives = 89/182 (48%), Gaps = 2/182 (1%)
Frame = +3
Query: 69 GEPMERLGAYMLEGLRARLERSGSMIYKTLKCEVPTSEELMTYMSILYRICPYWKFAYLS 248
G+ +RL GL ARL +GS IYK + + ++ ++ + CP+ K +Y
Sbjct: 378 GDGNQRLAHCFANGLEARLAGTGSQIYKGIVSKPRSAAAVLKAHQLFLACCPFRKLSYFI 437
Query: 249 SNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQPGGPPLIRITGVDDTQSNHARG 428
+N IR+ + N RV +IDF I G QW LI + G P +RITG++ Q
Sbjct: 438 TNKTIRDLVGNSQRVHVIDFGILYGFQWPTLIHRFSMY--GSPKVRITGIEFPQPGFRPA 495
Query: 429 GGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVELENLRIQPGEAIAVTFPFVLHHMPDE 608
+ G+RL+ A + V FE+ A A ++LE+L I E V + ++ DE
Sbjct: 496 QRVEETGQRLAAYAKLFGVPFEYKAIAKKWDAIQLEDLDIDRDEITVVNCLYRAENLHDE 555
Query: 609 SV 614
SV
Sbjct: 556 SV 557
>TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSOR OF GA1-3 1);
protein binding / transcription factor | chr2:255581-257344 REVERSE
Length = 588
Score = 94 bits (232), Expect = 6e-020
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 11/201 (5%)
Frame = +3
Query: 6 EEDMYAAANCMEVLGHMVSVSGEPMERLGAYMLEGLRARLERSGSMIYKTLKCEVPTSEE 185
+ ++ A ++ +G + M ++ Y E L R+ R + C S+
Sbjct: 234 QNNLTLAEALVKQIGCLAVSQAGAMRKVATYFAEALARRIYRLSPPQNQIDHC---LSDT 290
Query: 186 LMTYMSILYRICPYWKFAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQP 365
L + Y CPY KFA+ ++N I EA + RV +IDF + QG QW L+Q LA +
Sbjct: 291 LQMH---FYETCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNQGLQWPALMQALALRE 347
Query: 366 GGPPLIRITGVDDTQSNHARGGGLHIVGKRLSEVAAKYNVRFE---FNAAAMSGCEVELE 536
GGPP R+TG+ +++ LH VG +L+++A +V FE F A +++ + +
Sbjct: 348 GGPPTFRLTGIGPPAPDNS--DHLHEVGCKLAQLAEAIHVEFEYRGFVANSLADLDASML 405
Query: 537 NLRIQPGEAIAVTFPFVLHHM 599
LR EA+AV F LH +
Sbjct: 406 ELRPSDTEAVAVNSVFELHKL 426
>TAIR9_protein||AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW); protein
binding / protein homodimerization/ sequence-specific DNA binding /
transcription factor | chr3:20070550-20072625 FORWARD
Length = 654
Score = 94 bits (231), Expect = 8e-020
Identities = 63/193 (32%), Positives = 95/193 (49%), Gaps = 9/193 (4%)
Frame = +3
Query: 3 SEEDMYAAANCMEVLGHMVSVSGEPMERLGAYMLEGLRARLERSGSMIYKTLKCE-VPTS 179
S +++ A + + + + G +R+ AY E + ARL S IY L +P +
Sbjct: 302 SADNLEEANKLLLEISQLSTPYGTSAQRVAAYFSEAMSARLLNSCLGIYAALPSRWMPQT 361
Query: 180 EEL--MTYMSILYRICPYWKFAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHL 353
L ++ + I P KF++ ++N I+EA E V IID I QG QW L L
Sbjct: 362 HSLKMVSAFQVFNGISPLVKFSHFTANQAIQEAFEKEDSVHIIDLDIMQGLQWPGLFHIL 421
Query: 354 ACQPGGPPLIRITGVDDTQSNHARGGGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVEL 533
A +PGGPP +R+TG+ + L GKRLS+ A K + FEF A ++
Sbjct: 422 ASRPGGPPHVRLTGLGTSME------ALQATGKRLSDFADKLGLPFEFCPLAEKVGNLDT 475
Query: 534 ENLRIQPGEAIAV 572
E L ++ EA+AV
Sbjct: 476 ERLNVRKREAVAV 488
>TAIR9_protein||AT3G46600.1 | Symbols: | scarecrow transcription factor family
protein | chr3:17158048-17159799 FORWARD
Length = 584
Score = 92 bits (227), Expect = 2e-019
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 1/183 (0%)
Frame = +3
Query: 69 GEPMERLGAYMLEGLRARLERSGSMIYKTLKCEVPTSEELMTYMSILYRICPYWKFAYLS 248
G+ +RLG + E L AR+ + + + L Y + + CP Y +
Sbjct: 243 GDATQRLGYHFAEALEARITGTMTTPISATSSRTSMVDILKAYKGFV-QACPTLIMCYFT 301
Query: 249 SNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQPGGPPLIRITGVDDTQSNHARG 428
+N I E + IIDF I G QW LIQ L+ + GPPL+R+TG++ QS
Sbjct: 302 ANRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPS 361
Query: 429 GGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVELENLRIQPGEAIAVTFPFVLHHMPDE 608
+ G+RL K+NV FE++ A + + L++L I GE V L + PDE
Sbjct: 362 ERVEETGRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCILRLQYTPDE 421
Query: 609 SVS 617
+VS
Sbjct: 422 TVS 424
>TAIR9_protein||AT3G46600.2 | Symbols: | scarecrow transcription factor family
protein | chr3:17158379-17159799 FORWARD
Length = 454
Score = 92 bits (227), Expect = 2e-019
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 1/183 (0%)
Frame = +3
Query: 69 GEPMERLGAYMLEGLRARLERSGSMIYKTLKCEVPTSEELMTYMSILYRICPYWKFAYLS 248
G+ +RLG + E L AR+ + + + L Y + + CP Y +
Sbjct: 113 GDATQRLGYHFAEALEARITGTMTTPISATSSRTSMVDILKAYKGFV-QACPTLIMCYFT 171
Query: 249 SNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQPGGPPLIRITGVDDTQSNHARG 428
+N I E + IIDF I G QW LIQ L+ + GPPL+R+TG++ QS
Sbjct: 172 ANRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPS 231
Query: 429 GGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVELENLRIQPGEAIAVTFPFVLHHMPDE 608
+ G+RL K+NV FE++ A + + L++L I GE V L + PDE
Sbjct: 232 ERVEETGRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCILRLQYTPDE 291
Query: 609 SVS 617
+VS
Sbjct: 292 TVS 294
>TAIR9_protein||AT3G46600.3 | Symbols: | scarecrow transcription factor family
protein | chr3:17158052-17159799 FORWARD
Length = 552
Score = 92 bits (227), Expect = 2e-019
Identities = 58/183 (31%), Positives = 87/183 (47%), Gaps = 1/183 (0%)
Frame = +3
Query: 69 GEPMERLGAYMLEGLRARLERSGSMIYKTLKCEVPTSEELMTYMSILYRICPYWKFAYLS 248
G+ +RLG + E L AR+ + + + L Y + + CP Y +
Sbjct: 211 GDATQRLGYHFAEALEARITGTMTTPISATSSRTSMVDILKAYKGFV-QACPTLIMCYFT 269
Query: 249 SNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQPGGPPLIRITGVDDTQSNHARG 428
+N I E + IIDF I G QW LIQ L+ + GPPL+R+TG++ QS
Sbjct: 270 ANRTINELASKATTLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPS 329
Query: 429 GGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVELENLRIQPGEAIAVTFPFVLHHMPDE 608
+ G+RL K+NV FE++ A + + L++L I GE V L + PDE
Sbjct: 330 ERVEETGRRLKRFCDKFNVPFEYSFIAKNWENITLDDLVINSGETTVVNCILRLQYTPDE 389
Query: 609 SVS 617
+VS
Sbjct: 390 TVS 392
>TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROTEIN 3);
transcription factor | chr5:5764316-5765887 REVERSE
Length = 524
Score = 89 bits (218), Expect = 2e-018
Identities = 61/198 (30%), Positives = 98/198 (49%), Gaps = 14/198 (7%)
Frame = +3
Query: 9 EDMYAAANCMEVLGHMVSVSGEPMERLGAYMLEGLRARLERSGSMIYKTLKCEVPTSEEL 188
E++ A ++ +G + + M ++ Y E L R+ R I+ + P+ EE+
Sbjct: 171 ENLSLADALVKRVGLLAASQAGAMGKVATYFAEALARRIYR----IHPSAAAIDPSFEEI 226
Query: 189 MTYMSILYRICPYWKFAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQPG 368
+ Y CPY KFA+ ++N I EA+ V +ID + QG QW L+Q LA +PG
Sbjct: 227 L--QMNFYDSCPYLKFAHFTANQAILEAVTTSRVVHVIDLGLNQGMQWPALMQALALRPG 284
Query: 369 GPPLIRITGVDDTQSNHARGGGLHIVGKRLSEVAAKYNVRFEFNAAA---MSGCEVELEN 539
GPP R+TGV N + G+ +G +L+++A V F+FN +S E ++
Sbjct: 285 GPPSFRLTGV----GNPSNREGIQELGWKLAQLAQAIGVEFKFNGLTTERLSDLEPDMFE 340
Query: 540 LRIQPGEAIAVTFPFVLH 593
R + E + V F LH
Sbjct: 341 TRTE-SETLVVNSVFELH 357
>TAIR9_protein||AT1G07520.1 | Symbols: | scarecrow transcription factor family
protein | chr1:2309718-2311805 REVERSE
Length = 696
Score = 88 bits (217), Expect = 3e-018
Identities = 55/173 (31%), Positives = 89/173 (51%), Gaps = 5/173 (2%)
Frame = +3
Query: 69 GEPMERLGAYMLEGLRARLERS-GSMI---YKTLKCEVPTSEELMTYMSILYRICPYWKF 236
G+ +RL + L ARLE S G+MI Y ++ + T+ +++ S+ P+
Sbjct: 349 GDASQRLAHFFANALEARLEGSTGTMIQSYYDSISSKKRTAAQILKSYSVFLSASPFMTL 408
Query: 237 AYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQPGGPPLIRITGVDDTQSN 416
Y SN +I +A + + I+DF I G QW IQHL+ G +RITG++ Q
Sbjct: 409 IYFFSNKMILDAAKDASVLHIVDFGILYGFQWPMFIQHLSKSNPGLRKLRITGIEIPQHG 468
Query: 417 HARGGGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCE-VELENLRIQPGEAIAV 572
+ G+RL+E ++ V FE+NA A E +++E +I+P E +AV
Sbjct: 469 LRPTERIQDTGRRLTEYCKRFGVPFEYNAIASKNWETIKMEEFKIRPNEVLAV 521
>TAIR9_protein||AT1G63100.1 | Symbols: | scarecrow transcription factor family
protein | chr1:23399391-23401367 REVERSE
Length = 659
Score = 80 bits (195), Expect = 1e-015
Identities = 57/186 (30%), Positives = 89/186 (47%), Gaps = 10/186 (5%)
Frame = +3
Query: 48 GHMVSVSGE-PMERLGAYMLEGLRARLERSGSMIYKTL---KCEVPTSEELMTYMSILYR 215
G + S G PM RL AY +E L R+ R I+ + + +E + L +
Sbjct: 301 GDLASPRGRTPMTRLIAYYIEALALRVARMWPHIFHIAPPREFDRTVEDESGNALRFLNQ 360
Query: 216 ICPYWKFAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQPGGPPLIRITG 395
+ P KF + ++N ++ A + RV IIDF I QG QW Q LA + P +RITG
Sbjct: 361 VTPIPKFIHFTANEMLLRAFEGKERVHIIDFDIKQGLQWPSFFQSLASRINPPHHVRITG 420
Query: 396 VDDTQSNHARGGGLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVELENLRIQPGEAIAVT 575
+ +++ L+ G RL A N++FEF+ +V L L ++ GE++AV
Sbjct: 421 IGESKLE------LNETGDRLHGFAEAMNLQFEFHPVVDRLEDVRLWMLHVKEGESVAVN 474
Query: 576 FPFVLH 593
+H
Sbjct: 475 CVMQMH 480
>TAIR9_protein||AT4G08250.1 | Symbols: | scarecrow transcription factor family
protein | chr4:5196787-5198238 FORWARD
Length = 484
Score = 76 bits (186), Expect = 1e-014
Identities = 47/177 (26%), Positives = 82/177 (46%), Gaps = 5/177 (2%)
Frame = +3
Query: 78 MERLGAYMLEGLRARLERSGSMIYKTLKCEVPTSEELMTYMSILYRICPYWKFAYLSSNV 257
MERL A+ GL LER + + + +V ++++ +L + PY F YL++
Sbjct: 144 MERLAAHFTNGLSKLLERDSVLCPQQHRDDVYDQADVISAFELLQNMSPYVNFGYLTATQ 203
Query: 258 VIREALLNEPRVRIIDFQIAQGTQWVPLIQHLACQPGGPPL--IRITGVDDTQSNHARGG 431
I EA+ E R+ I+D+ I +G QW L+Q L + GP +RIT + +
Sbjct: 204 AILEAVKYERRIHIVDYDINEGVQWASLMQALVSRNTGPSAQHLRITALSRATNGKKSVA 263
Query: 432 GLHIVGKRLSEVAAKYNVRFEFNAAAMSGCEVELENLRIQPGEAIAVTFPFVLHHMP 602
+ G+RL+ A F + + +L++ GEA+ + + H+P
Sbjct: 264 AVQETGRRLTAFADSIGQPFSYQHCKLDTNAFSTSSLKLVRGEAVVIN---CMLHLP 317
>TAIR9_protein||AT5G41920.1 | Symbols: | scarecrow transcription factor family
protein | chr5:16779982-16781199 FORWARD
Length = 406
Score = 68 bits (165), Expect = 3e-012
Identities = 54/192 (28%), Positives = 88/192 (45%), Gaps = 19/192 (9%)
Frame = +3
Query: 24 AANCMEVLGHMVSVSGEPMERLGAYMLEGLRARLERSGSMIYKTLKCE--------VPTS 179
A+ + + + S G ER+ AY + L+ R+ S Y + C V S
Sbjct: 59 ASTLLSEISEICSPFGSSPERVVAYFAQALQTRVISS----YLSGACSPLSEKPLTVVQS 114
Query: 180 EELMTYMSILYRICPYWKFAYLSSNVVIREALLNEPRVRIIDFQIAQGTQWVPLIQHLAC 359
+++ + + + P KF++ ++N I +AL E V IID + QG QW L LA
Sbjct: 115 QKIFSALQTYNSVSPLIKFSHFTANQAIFQALDGEDSVHIIDLDVMQGLQWPALFHILAS 174
Query: 360 QPGGPPLIRITGVDDTQSNHARGGGLHIVGKRLSEVAAKYNVRFEFN-AAAMSGCEVELE 536
+P IRITG + L G+RL++ A+ N+ FEF+ + G ++
Sbjct: 175 RPRKLRSIRITGFGSSSDL------LASTGRRLADFASSLNLPFEFHPIEGIIGNLIDPS 228
Query: 537 NLRIQPGEAIAV 572
L + GEA+ V
Sbjct: 229 QLATRQGEAVVV 240
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,347,376,321
Number of Sequences: 33410
Number of Extensions: 4347376321
Number of Successful Extensions: 240962520
Number of sequences better than 0.0: 0
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