BLASTX 7.6.2
Query= RU25185 /QuerySize=261
(260 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIK... 96 4e-021
TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription... 66 3e-012
TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a... 64 2e-011
TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a... 64 2e-011
TAIR9_protein||AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transc... 49 7e-007
>TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1);
transcription factor | chr1:7509721-7511502 FORWARD
Length = 594
Score = 96 bits (237), Expect = 4e-021
Identities = 46/61 (75%), Positives = 55/61 (90%)
Frame = -3
Query: 258 VFDCAGALSEGNIEEASTIINELRQLVSIQGDPPQRIAAYMVEGLAARMASSGKYLYRAL 79
+ CA ALSEG +EEA +++NELRQ+VSIQGDP QRIAAYMVEGLAARMA+SGK++YRAL
Sbjct: 226 LISCARALSEGKLEEALSMVNELRQIVSIQGDPSQRIAAYMVEGLAARMAASGKFIYRAL 285
Query: 78 K 76
K
Sbjct: 286 K 286
Score = 51 bits (121), Expect = 1e-007
Identities = 22/24 (91%)
Frame = -1
Query: 77 KCKEPPSSYRLAAMQVLFEVCPCF 6
KCKEPPS RLAAMQVLFEVCPCF
Sbjct: 286 KCKEPPSDERLAAMQVLFEVCPCF 309
>TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor |
chr1:18737398-18739547 REVERSE
Length = 598
Score = 66 bits (160), Expect = 3e-012
Identities = 28/61 (45%), Positives = 47/61 (77%)
Frame = -3
Query: 258 VFDCAGALSEGNIEEASTIINELRQLVSIQGDPPQRIAAYMVEGLAARMASSGKYLYRAL 79
+++CA A+ ++E +I++L+Q+VS+ G+P QR+ AYM+EGL AR+ASSG +Y+AL
Sbjct: 231 LYECAKAVENYDLEMTDWLISQLQQMVSVSGEPVQRLGAYMLEGLVARLASSGSSIYKAL 290
Query: 78 K 76
+
Sbjct: 291 R 291
>TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 64 bits (154), Expect = 2e-011
Identities = 28/57 (49%), Positives = 45/57 (78%)
Frame = -3
Query: 249 CAGALSEGNIEEASTIINELRQLVSIQGDPPQRIAAYMVEGLAARMASSGKYLYRAL 79
CA A+SE ++ A +++ +LRQ+VS+ G+P QR+ AY++EGL A++ASSG +Y+AL
Sbjct: 126 CAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKAL 182
>TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 64 bits (154), Expect = 2e-011
Identities = 28/57 (49%), Positives = 45/57 (78%)
Frame = -3
Query: 249 CAGALSEGNIEEASTIINELRQLVSIQGDPPQRIAAYMVEGLAARMASSGKYLYRAL 79
CA A+SE ++ A +++ +LRQ+VS+ G+P QR+ AY++EGL A++ASSG +Y+AL
Sbjct: 126 CAKAMSENDLMMAHSMMEKLRQMVSVSGEPIQRLGAYLLEGLVAQLASSGSSIYKAL 182
>TAIR9_protein||AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transcription factor
| chr1:18678177-18679625 REVERSE
Length = 483
Score = 49 bits (114), Expect = 7e-007
Identities = 25/62 (40%), Positives = 35/62 (56%)
Frame = -3
Query: 249 CAGALSEGNIEEASTIINELRQLVSIQGDPPQRIAAYMVEGLAARMASSGKYLYRALKMQ 70
CA ++ G+++ A+ + +L L S GD QRIAAY E LA R+ S LY+AL
Sbjct: 61 CANHVASGSLQNANAALEQLSHLASPDGDTMQRIAAYFTEALANRILKSWPGLYKALNAT 120
Query: 69 GT 64
T
Sbjct: 121 QT 122
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,347,376,321
Number of Sequences: 33410
Number of Extensions: 4347376321
Number of Successful Extensions: 240962520
Number of sequences better than 0.0: 0
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