BLASTX 7.6.2
Query= RU25415 /QuerySize=159
(158 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G63260.1 | Symbols: | zinc finger (CCCH-type)... 75 1e-014
TAIR9_protein||AT3G48440.1 | Symbols: | zinc finger (CCCH-type)... 71 1e-013
TAIR9_protein||AT3G06410.1 | Symbols: | nucleic acid binding / ... 64 1e-011
TAIR9_protein||AT1G48195.1 | Symbols: | zinc finger (CCCH-type)... 59 7e-010
TAIR9_protein||AT5G18550.1 | Symbols: | nucleic acid binding / ... 56 4e-009
TAIR9_protein||AT2G47850.1 | Symbols: | zinc finger (CCCH-type)... 56 5e-009
TAIR9_protein||AT2G47850.2 | Symbols: | zinc finger (CCCH-type)... 56 5e-009
TAIR9_protein||AT2G47850.3 | Symbols: | zinc finger (CCCH-type)... 56 5e-009
TAIR9_protein||AT3G02830.1 | Symbols: ZFN1 | ZFN1 (ZINC FINGER P... 56 5e-009
TAIR9_protein||AT5G16540.2 | Symbols: ZFN3 | ZFN3 (ZINC FINGER N... 56 5e-009
TAIR9_protein||AT5G16540.3 | Symbols: ZFN3 | ZFN3 (ZINC FINGER N... 56 5e-009
TAIR9_protein||AT5G16540.1 | Symbols: ZFN3 | ZFN3 (ZINC FINGER N... 56 5e-009
TAIR9_protein||AT3G12680.1 | Symbols: HUA1 | HUA1 (ENHANCER OF A... 52 5e-008
TAIR9_protein||AT1G04990.2 | Symbols: | zinc finger (CCCH-type)... 50 2e-007
TAIR9_protein||AT1G04990.1 | Symbols: | zinc finger (CCCH-type)... 50 2e-007
TAIR9_protein||AT2G32930.1 | Symbols: ZFN2 | ZFN2 (ZINC FINGER N... 45 6e-006
>TAIR9_protein||AT5G63260.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr5:25361900-25364453 FORWARD
Length = 436
Score = 75 bits (182), Expect = 1e-014
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +3
Query: 6 INNSGTETNVYKQYPPSNQVDEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
+NNS ET+ + QY V+EFPERP QP C+++L+TGDCKFK CKYHH
Sbjct: 309 VNNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHH 359
>TAIR9_protein||AT3G48440.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr3:17941402-17943576 FORWARD
Length = 449
Score = 71 bits (172), Expect = 1e-013
Identities = 30/52 (57%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +3
Query: 6 INNSGTETN-VYKQYPPSNQVDEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
+NNS ET+ + QY +EFPERP QP CS++++TGDCKFK NCKYHH
Sbjct: 320 MNNSSAETSMLLSQYRHQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKYHH 371
>TAIR9_protein||AT3G06410.1 | Symbols: | nucleic acid binding / zinc ion
binding | chr3:1947471-1949528 REVERSE
Length = 463
Score = 64 bits (155), Expect = 1e-011
Identities = 26/45 (57%), Positives = 32/45 (71%), Gaps = 1/45 (2%)
Frame = +3
Query: 27 TNVYKQYPPSNQVD-EFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
T Y+ P SN EFP+RP QP C +F+RTGDCKF S+C+YHH
Sbjct: 288 TGTYQSVPSSNSTSKEFPQRPDQPECQYFMRTGDCKFGSSCRYHH 332
Score = 50 bits (117), Expect = 3e-007
Identities = 18/28 (64%), Positives = 22/28 (78%)
Frame = +3
Query: 75 PERPGQPLCSFFLRTGDCKFKSNCKYHH 158
PER G P+C F+RTG CKF ++CKYHH
Sbjct: 98 PERMGHPVCQHFMRTGTCKFGASCKYHH 125
>TAIR9_protein||AT1G48195.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr1:17796349-17796597 FORWARD
Length = 83
Score = 59 bits (140), Expect = 7e-010
Identities = 21/31 (67%), Positives = 27/31 (87%)
Frame = +3
Query: 66 DEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
++FPERPG+P CS++LRTG+C K NCKYHH
Sbjct: 4 EKFPERPGEPECSYYLRTGNCYLKQNCKYHH 34
>TAIR9_protein||AT5G18550.1 | Symbols: | nucleic acid binding / zinc ion
binding | chr5:6160515-6162729 FORWARD
Length = 466
Score = 56 bits (134), Expect = 4e-009
Identities = 20/35 (57%), Positives = 28/35 (80%)
Frame = +3
Query: 54 SNQVDEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
SN+ FP+RP QP C +F+RTGDCKF ++C++HH
Sbjct: 291 SNKEQTFPQRPEQPECQYFMRTGDCKFGTSCRFHH 325
Score = 56 bits (134), Expect = 4e-009
Identities = 21/33 (63%), Positives = 26/33 (78%)
Frame = +3
Query: 60 QVDEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
+ EFPER GQP+C F+RTG CKF ++CKYHH
Sbjct: 90 EAGEFPERMGQPVCQHFMRTGTCKFGASCKYHH 122
>TAIR9_protein||AT2G47850.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:19595953-19598119 FORWARD
Length = 469
Score = 56 bits (133), Expect = 5e-009
Identities = 19/29 (65%), Positives = 26/29 (89%)
Frame = +3
Query: 72 FPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
FPERPG+P C ++L+TGDCKF ++CK+HH
Sbjct: 286 FPERPGEPECQYYLKTGDCKFGTSCKFHH 314
Score = 46 bits (108), Expect = 4e-006
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +3
Query: 66 DEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
D +PERPG P C++++RTG C + + C+Y+H
Sbjct: 40 DSYPERPGAPDCAYYMRTGVCGYGNRCRYNH 70
>TAIR9_protein||AT2G47850.2 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:19595953-19598119 FORWARD
Length = 443
Score = 56 bits (133), Expect = 5e-009
Identities = 19/29 (65%), Positives = 26/29 (89%)
Frame = +3
Query: 72 FPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
FPERPG+P C ++L+TGDCKF ++CK+HH
Sbjct: 260 FPERPGEPECQYYLKTGDCKFGTSCKFHH 288
Score = 46 bits (108), Expect = 4e-006
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +3
Query: 66 DEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
D +PERPG P C++++RTG C + + C+Y+H
Sbjct: 40 DSYPERPGAPDCAYYMRTGVCGYGNRCRYNH 70
>TAIR9_protein||AT2G47850.3 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:19595953-19598119 FORWARD
Length = 469
Score = 56 bits (133), Expect = 5e-009
Identities = 19/29 (65%), Positives = 26/29 (89%)
Frame = +3
Query: 72 FPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
FPERPG+P C ++L+TGDCKF ++CK+HH
Sbjct: 286 FPERPGEPECQYYLKTGDCKFGTSCKFHH 314
Score = 46 bits (108), Expect = 4e-006
Identities = 15/31 (48%), Positives = 24/31 (77%)
Frame = +3
Query: 66 DEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
D +PERPG P C++++RTG C + + C+Y+H
Sbjct: 40 DSYPERPGAPDCAYYMRTGVCGYGNRCRYNH 70
>TAIR9_protein||AT3G02830.1 | Symbols: ZFN1 | ZFN1 (ZINC FINGER PROTEIN 1); DNA
binding / nuclease/ nucleic acid binding | chr3:614075-615916 FORWARD
Length = 398
Score = 56 bits (133), Expect = 5e-009
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +3
Query: 72 FPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
FPERPGQP C F+++TGDCKF + CK+HH
Sbjct: 271 FPERPGQPECQFYMKTGDCKFGTVCKFHH 299
Score = 49 bits (114), Expect = 7e-007
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = +3
Query: 60 QVDEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
+ +PERPG+P CS+++RTG C+F S C+++H
Sbjct: 33 ETGSYPERPGEPDCSYYIRTGLCRFGSTCRFNH 65
>TAIR9_protein||AT5G16540.2 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding | chr5:5403437-5405034
FORWARD
Length = 369
Score = 56 bits (133), Expect = 5e-009
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +3
Query: 72 FPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
FPERPGQP C F+++TGDCKF + CK+HH
Sbjct: 240 FPERPGQPECQFYMKTGDCKFGTVCKFHH 268
>TAIR9_protein||AT5G16540.3 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding | chr5:5403598-5405034
FORWARD
Length = 355
Score = 56 bits (133), Expect = 5e-009
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +3
Query: 72 FPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
FPERPGQP C F+++TGDCKF + CK+HH
Sbjct: 219 FPERPGQPECQFYMKTGDCKFGTVCKFHH 247
>TAIR9_protein||AT5G16540.1 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding | chr5:5403437-5405034
FORWARD
Length = 376
Score = 56 bits (133), Expect = 5e-009
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +3
Query: 72 FPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
FPERPGQP C F+++TGDCKF + CK+HH
Sbjct: 240 FPERPGQPECQFYMKTGDCKFGTVCKFHH 268
>TAIR9_protein||AT3G12680.1 | Symbols: HUA1 | HUA1 (ENHANCER OF AG-4 1); RNA
binding | chr3:4025276-4028999 REVERSE
Length = 525
Score = 52 bits (124), Expect = 5e-008
Identities = 17/31 (54%), Positives = 25/31 (80%)
Frame = +3
Query: 66 DEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
D PERP +P+C+F+++TG CKF +CK+HH
Sbjct: 263 DSLPERPSEPMCTFYMKTGKCKFGLSCKFHH 293
Score = 49 bits (114), Expect = 7e-007
Identities = 15/29 (51%), Positives = 23/29 (79%)
Frame = +3
Query: 72 FPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
+P+RPGQ C ++++TG+CKF CK+HH
Sbjct: 417 YPQRPGQSECDYYMKTGECKFGERCKFHH 445
Score = 47 bits (109), Expect = 3e-006
Identities = 15/31 (48%), Positives = 25/31 (80%)
Frame = +3
Query: 66 DEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
+E+PERPG+P C ++++T CK+ S CK++H
Sbjct: 220 EEYPERPGEPDCPYYIKTQRCKYGSKCKFNH 250
>TAIR9_protein||AT1G04990.2 | Symbols: | zinc finger (CCCH-type) family protein
| chr1:1419368-1421454 REVERSE
Length = 405
Score = 50 bits (119), Expect = 2e-007
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3
Query: 66 DEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
+E PER GQP C +FL+TG CK+ CKYHH
Sbjct: 85 EELPERIGQPDCEYFLKTGACKYGPTCKYHH 115
>TAIR9_protein||AT1G04990.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr1:1419368-1421454 REVERSE
Length = 405
Score = 50 bits (119), Expect = 2e-007
Identities = 19/31 (61%), Positives = 23/31 (74%)
Frame = +3
Query: 66 DEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
+E PER GQP C +FL+TG CK+ CKYHH
Sbjct: 85 EELPERIGQPDCEYFLKTGACKYGPTCKYHH 115
>TAIR9_protein||AT2G32930.1 | Symbols: ZFN2 | ZFN2 (ZINC FINGER NUCLEASE 2); DNA
binding / nuclease/ nucleic acid binding | chr2:13965990-13968419
REVERSE
Length = 454
Score = 45 bits (106), Expect = 6e-006
Identities = 16/33 (48%), Positives = 24/33 (72%)
Frame = +3
Query: 60 QVDEFPERPGQPLCSFFLRTGDCKFKSNCKYHH 158
Q +P+RPG+ C FFLRTG C + ++C+Y+H
Sbjct: 37 QSSPYPDRPGERDCQFFLRTGQCGYGNSCRYNH 69
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,375,539,367
Number of Sequences: 33410
Number of Extensions: 4375539367
Number of Successful Extensions: 241311564
Number of sequences better than 0.0: 0
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