BLASTX 7.6.2
Query= RU25474 /QuerySize=700
(699 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G15930.1 | Symbols: | microtubule motor | chr... 171 5e-043
TAIR9_protein||AT1G23220.1 | Symbols: | dynein light chain type... 79 2e-015
TAIR9_protein||AT5G20110.1 | Symbols: | dynein light chain, put... 76 2e-014
TAIR9_protein||AT1G52240.2 | Symbols: ATROPGEF11, ROPGEF11 | ROP... 74 8e-014
TAIR9_protein||AT3G16120.1 | Symbols: | dynein light chain, put... 71 6e-013
TAIR9_protein||AT4G27360.1 | Symbols: | dynein light chain, put... 69 3e-012
>TAIR9_protein||AT4G15930.1 | Symbols: | microtubule motor |
chr4:9036344-9037825 FORWARD
Length = 124
Score = 171 bits (432), Expect = 5e-043
Identities = 86/118 (72%), Positives = 95/118 (80%), Gaps = 3/118 (2%)
Frame = +3
Query: 153 KRSVPGTVPTKPNSDDRKPS-PAVTTS--TGKRVIIKSADMFQDMQKEAVEIAIGAFETH 323
K+SV G P + DDR+ S P V S GKR +IKSADM DMQKEA+EIAI AFE +
Sbjct: 7 KKSVNGGAPAQTILDDRRSSLPEVEASPPAGKRAVIKSADMKDDMQKEAIEIAISAFEKY 66
Query: 324 SVEKDVAEHIKKEFDSRHGPTWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG* 497
SVEKD+AE+IKKEFD +HG TWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG*
Sbjct: 67 SVEKDIAENIKKEFDKKHGATWHCIVGRNFGSYVTHETNHFVYFYLDQKAVLLFKSG* 124
>TAIR9_protein||AT1G23220.1 | Symbols: | dynein light chain type 1 family
protein | chr1:8242614-8244136 FORWARD
Length = 130
Score = 79 bits (193), Expect = 2e-015
Identities = 39/91 (42%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Frame = +3
Query: 243 VIIKSADMFQDMQKEAVEIA---IGAFETHSVEKDVAEHIKKEFDSRHGPTWHCIVGRNF 413
V ++++DM Q A ++ + A + K +A +KK+FDS +GP WHCIVG +F
Sbjct: 36 VRVRASDMPLPQQNRAFSLSREILNATPGKADNKRLAHALKKDFDSAYGPAWHCIVGTSF 95
Query: 414 GSYVTHETNHFVYFYLDQKAVLLFKSG*PPV 506
GSYVTH T F+YF +D+ VLLFK+ P+
Sbjct: 96 GSYVTHSTGGFLYFQIDKVYVLLFKTAVEPL 126
>TAIR9_protein||AT5G20110.1 | Symbols: | dynein light chain, putative |
chr5:6791542-6793253 REVERSE
Length = 210
Score = 76 bits (186), Expect = 2e-014
Identities = 42/86 (48%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Frame = +3
Query: 243 VIIKSADMFQDMQKEAVEIA---IGAFETHSVEKDVAEHIKKEFDSRHGPTWHCIVGRNF 413
V I +ADM MQ A A + + E S K +A ++KKEFD +GP WHCIVG +F
Sbjct: 117 VRILAADMPGFMQAHAFRCARMTLDSLEKFS-SKHMAFNLKKEFDKGYGPAWHCIVGSSF 175
Query: 414 GSYVTHETNHFVYFYLDQKAVLLFKS 491
GS+VTH T F+YF +D+ VLLFK+
Sbjct: 176 GSFVTHSTGCFIYFSMDKLYVLLFKT 201
>TAIR9_protein||AT1G52240.2 | Symbols: ATROPGEF11, ROPGEF11 | ROPGEF11 (RHO
GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11); Rho guanyl-nucleotide exchange
factor | chr1:19458844-19459235 REVERSE
Length = 95
Score = 74 bits (180), Expect = 8e-014
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Frame = +3
Query: 240 RVIIKSADMFQDMQKEAVEIAIGAFETHSVE--KDVAEHIKKEFDSRHGPTWHCIVGRNF 413
+ +++ +DM MQ +A+ A A + V K +A HIKKEFD R+G W C+VG NF
Sbjct: 5 KAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVVGSNF 64
Query: 414 GSYVTHETNHFVYFYLDQKAVLLFKSG*PP 503
G + TH F+YF L+ L+FK P
Sbjct: 65 GCFFTHSKGTFIYFQLETLKFLIFKGASTP 94
>TAIR9_protein||AT3G16120.1 | Symbols: | dynein light chain, putative |
chr3:5465035-5465395 FORWARD
Length = 94
Score = 71 bits (172), Expect = 6e-013
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 2/82 (2%)
Frame = +3
Query: 249 IKSADMFQDMQKEAVEIAIGAFETHSV--EKDVAEHIKKEFDSRHGPTWHCIVGRNFGSY 422
++ DM MQ +A++IA + + V +A HIKKEFD R+G W C+VG NFG +
Sbjct: 8 VEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVVGTNFGCF 67
Query: 423 VTHETNHFVYFYLDQKAVLLFK 488
TH F+YF+L L+FK
Sbjct: 68 FTHSKGTFIYFHLGTLNFLIFK 89
>TAIR9_protein||AT4G27360.1 | Symbols: | dynein light chain, putative |
chr4:13694032-13694517 FORWARD
Length = 104
Score = 69 bits (166), Expect = 3e-012
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Frame = +3
Query: 240 RVIIKSADMFQDMQKEAVEIAIGAFETHSVEK--DVAEHIKKEFDSRHGPTWHCIVGRNF 413
+ ++ DM Q M+++A+ +A A + V + +A IKKEFD +G W CIVG +F
Sbjct: 5 KAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIVGTHF 64
Query: 414 GSYVTHETNHFVYFYLDQKAVLLFK 488
GS+VTH + F++F + +LLFK
Sbjct: 65 GSFVTHCSGCFIHFSVGSLTILLFK 89
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,375,539,367
Number of Sequences: 33410
Number of Extensions: 4375539367
Number of Successful Extensions: 241311564
Number of sequences better than 0.0: 0
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