Blast details for RU25550 (Arabidopsis)


BLASTX 7.6.2

Query= RU25550 /QuerySize=907
        (906 letters)

Database: TAIR9 protein;
          33,410 sequences; 13,468,323 total letters
                                                                  Score    E
Sequences producing significant alignments:                       (bits) Value

TAIR9_protein||AT1G25520.1 | Symbols:  | unknown protein | chr1:...    314   5e-086
TAIR9_protein||AT1G68650.1 | Symbols:  | unknown protein | chr1:...    308   4e-084
TAIR9_protein||AT4G13590.1 | Symbols:  | unknown protein | chr4:...    136   2e-032
TAIR9_protein||AT1G64150.1 | Symbols:  | unknown protein | chr1:...    112   4e-025
TAIR9_protein||AT5G36290.1 | Symbols:  | unknown protein | chr5:...    100   2e-021
TAIR9_protein||AT5G36290.2 | Symbols:  | unknown protein | chr5:...    100   2e-021

>TAIR9_protein||AT1G25520.1 | Symbols:  | unknown protein | chr1:8962324-8964173
        FORWARD

          Length = 231

 Score =  314 bits (804), Expect = 5e-086
 Identities = 159/226 (70%), Positives = 178/226 (78%), Gaps = 5/226 (2%)
 Frame = -2

Query: 770 MSTVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSVLVGW 591
           MS+V+QGFTKSLAMT +SEIGDKTFFAAAILAMR+PRRLVL+GCL ALIVMTILS  +GW
Sbjct:   1 MSSVLQGFTKSLAMTFVSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGW 60

Query: 590 AAPNLLSRTWTHHITTVLFFGFGLWSLWDAFK-----XXXXXXXXXXXXXXXXXXXGSTK 426
           AAPNL+SR WTHHITT+LFFGFGLWSLWD FK                         S K
Sbjct:  61 AAPNLISRKWTHHITTLLFFGFGLWSLWDGFKEGGGGSEELAEVEAELDADLKANGKSPK 120

Query: 425 QXXXXXXXXXXQNRSFILQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPLGVVIG 246
                      QNR+F+ QFFSPIFLKAFSI FFGEWGDKSQLATIGLAADENP GVV+G
Sbjct: 121 DSSKREDENKKQNRAFLTQFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPFGVVLG 180

Query: 245 GIIGQALCTTAAVLGGKSLASQISEKIVALSGGVLFIVFGIQSFLS 108
           G++ Q LCTTAAV+GGKSLASQISE+IVALSGG+LFI+FGIQS+L+
Sbjct: 181 GVVAQFLCTTAAVIGGKSLASQISERIVALSGGMLFIIFGIQSYLT 226

>TAIR9_protein||AT1G68650.1 | Symbols:  | unknown protein |
        chr1:25775825-25777683 FORWARD

          Length = 229

 Score =  308 bits (788), Expect = 4e-084
 Identities = 158/224 (70%), Positives = 173/224 (77%), Gaps = 3/224 (1%)
 Frame = -2

Query: 770 MSTVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSVLVGW 591
           M +++QGFTKSLAMT LSEIGDKTFFAAAILAMR+PRRLVL+GCL ALIVMTILS  +GW
Sbjct:   1 MGSLLQGFTKSLAMTFLSEIGDKTFFAAAILAMRYPRRLVLAGCLSALIVMTILSATLGW 60

Query: 590 AAPNLLSRTWTHHITTVLFFGFGLWSLWDAFKXXXXXXXXXXXXXXXXXXXGST---KQX 420
           AAPNL+SR WTHHITT LFFGFGLWSLWD FK                     T    + 
Sbjct:  61 AAPNLISRKWTHHITTFLFFGFGLWSLWDGFKEGGGSEELAEVEAELDSDLKKTNDQSKN 120

Query: 419 XXXXXXXXXQNRSFILQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPLGVVIGGI 240
                    Q R F+  FFSPIFLKAFSI FFGEWGDKSQLATIGLAADENPLGVV+GGI
Sbjct: 121 SKIEDEQKKQKRPFLTAFFSPIFLKAFSINFFGEWGDKSQLATIGLAADENPLGVVLGGI 180

Query: 239 IGQALCTTAAVLGGKSLASQISEKIVALSGGVLFIVFGIQSFLS 108
           + Q LCTTAAVLGGKSLASQISE+IVALSGG+LFI+FGIQS L+
Sbjct: 181 VAQTLCTTAAVLGGKSLASQISERIVALSGGMLFIIFGIQSLLT 224

>TAIR9_protein||AT4G13590.1 | Symbols:  | unknown protein | chr4:7901369-7903792
        REVERSE

          Length = 360

 Score =  136 bits (342), Expect = 2e-032
 Identities = 84/227 (37%), Positives = 119/227 (52%), Gaps = 12/227 (5%)
 Frame = -2

Query: 779 SVKMSTVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSVL 600
           SV  +    GFT + ++  +SEIGDKTFF AA+LAM++ + LVL G +GAL +MTILSV+
Sbjct: 136 SVLAAVAKSGFTAAFSLIFVSEIGDKTFFIAALLAMQYEKTLVLLGSMGALSLMTILSVV 195

Query: 599 VGWAAPNLLSRTWT-----HHITTVLFFGFGLWSLWDAFKXXXXXXXXXXXXXXXXXXXG 435
           +G    ++ ++  T      +    L   FGL S+ DA+                     
Sbjct: 196 IGKIFQSVPAQFQTTLPIGEYAAIALLMFFGLKSIKDAWDLPPVEAKNGEETGIELGEYS 255

Query: 434 STKQXXXXXXXXXXQNRSFILQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPLGV 255
             ++           N   IL        K+FS+ FF EWGD+S LAT+ L A ++PLGV
Sbjct: 256 EAEELVKEKASKKLTNPLEIL-------WKSFSLVFFAEWGDRSMLATVALGAAQSPLGV 308

Query: 254 VIGGIIGQALCTTAAVLGGKSLASQISEKIVALSGGVLFIVFGIQSF 114
             G I G  + T  A++GG  LA+ ISEK+V   GG LF+VF   +F
Sbjct: 309 ASGAIAGHLVATVLAIMGGAFLANYISEKLVGYVGGALFLVFAAATF 355

>TAIR9_protein||AT1G64150.1 | Symbols:  | unknown protein |
        chr1:23809047-23812579 REVERSE

          Length = 371

 Score =  112 bits (279), Expect = 4e-025
 Identities = 74/218 (33%), Positives = 102/218 (46%), Gaps = 13/218 (5%)
 Frame = -2

Query: 770 MSTVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSVLVGW 591
           +  +  GF  +  +   SE+GDKTFF AA+LA R+    V  G  GAL +MTI+SV++G 
Sbjct: 152 LGDISSGFASAFLLIFFSELGDKTFFIAALLAARNSAATVFVGTFGALGIMTIISVVLG- 210

Query: 590 AAPNLLSRTWTHHITTVLFFGFGLWSL----WDAFKXXXXXXXXXXXXXXXXXXXGSTKQ 423
                  RT+ H++  VL F FG   L      A                        +Q
Sbjct: 211 -------RTF-HYVDEVLPFRFGGTDLPIDDIAAVCLLVYFGVSTLLDAVSDEGKADEEQ 262

Query: 422 XXXXXXXXXXQNRSFILQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPLGVVIGG 243
                           +   +   +  F++ F  EWGDKS  +TI LAA  +PLGV+ G 
Sbjct: 263 KEAELAVSELSGNGAGIVAAANTIISTFALVFVAEWGDKSFFSTIALAAASSPLGVIAGA 322

Query: 242 IIGQALCTTAAVLGGKSLASQISEKIVALSGGVLFIVF 129
           + G    T  AVLGG  L + +SEK +A  GGVLF+VF
Sbjct: 323 LAGHGAATLLAVLGGSLLGNFLSEKAIAYVGGVLFLVF 360

>TAIR9_protein||AT5G36290.1 | Symbols:  | unknown protein |
        chr5:14302977-14304972 FORWARD

          Length = 294

 Score =  100 bits (247), Expect = 2e-021
 Identities = 46/91 (50%), Positives = 65/91 (71%)
 Frame = -2

Query: 386 RSFILQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPLGVVIGGIIGQALCTTAAV 207
           R    +F +PIFL++F +TF  EWGD+SQ+ATI LA  +N +GV IG  IG  +CT+ AV
Sbjct: 198 RRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAIGASIGHTVCTSLAV 257

Query: 206 LGGKSLASQISEKIVALSGGVLFIVFGIQSF 114
           +GG  LAS+IS++ VA  GG+LF+ F + S+
Sbjct: 258 VGGSMLASRISQRTVATVGGLLFLGFSVSSY 288


 Score =  83 bits (203), Expect = 2e-016
 Identities = 44/90 (48%), Positives = 60/90 (66%)
 Frame = -2

Query: 764 TVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSVLVGWAA 585
           +V      S +M +++EIGD+TF  AA++AMRHP+  VLSG L AL VMTILS  +G   
Sbjct:  80 SVFDALFSSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVMTILSTGLGRIV 139

Query: 584 PNLLSRTWTHHITTVLFFGFGLWSLWDAFK 495
           PNL+SR  T+   TVL+  FGL  L+ A++
Sbjct: 140 PNLISRKHTNSAATVLYAFFGLRLLYIAWR 169

>TAIR9_protein||AT5G36290.2 | Symbols:  | unknown protein |
        chr5:14302977-14304972 FORWARD

          Length = 294

 Score =  100 bits (247), Expect = 2e-021
 Identities = 46/91 (50%), Positives = 65/91 (71%)
 Frame = -2

Query: 386 RSFILQFFSPIFLKAFSITFFGEWGDKSQLATIGLAADENPLGVVIGGIIGQALCTTAAV 207
           R    +F +PIFL++F +TF  EWGD+SQ+ATI LA  +N +GV IG  IG  +CT+ AV
Sbjct: 198 RRLFSRFCTPIFLESFILTFLAEWGDRSQIATIALATHKNAIGVAIGASIGHTVCTSLAV 257

Query: 206 LGGKSLASQISEKIVALSGGVLFIVFGIQSF 114
           +GG  LAS+IS++ VA  GG+LF+ F + S+
Sbjct: 258 VGGSMLASRISQRTVATVGGLLFLGFSVSSY 288


 Score =  83 bits (203), Expect = 2e-016
 Identities = 44/90 (48%), Positives = 60/90 (66%)
 Frame = -2

Query: 764 TVVQGFTKSLAMTVLSEIGDKTFFAAAILAMRHPRRLVLSGCLGALIVMTILSVLVGWAA 585
           +V      S +M +++EIGD+TF  AA++AMRHP+  VLSG L AL VMTILS  +G   
Sbjct:  80 SVFDALFSSFSMILVTEIGDETFIIAALMAMRHPKATVLSGALSALFVMTILSTGLGRIV 139

Query: 584 PNLLSRTWTHHITTVLFFGFGLWSLWDAFK 495
           PNL+SR  T+   TVL+  FGL  L+ A++
Sbjct: 140 PNLISRKHTNSAATVLYAFFGLRLLYIAWR 169

  Database: TAIR9 protein
    Posted date:  Wed Jul 08 15:16:08 2009
  Number of letters in database: 13,468,323
  Number of sequences in database:  33,410

Lambda     K     H
   0.267   0.041    0.140
Gapped
Lambda     K     H
   0.267   0.041    0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,403,461,098
Number of Sequences: 33410
Number of Extensions: 4403461098
Number of Successful Extensions: 241458331
Number of sequences better than 0.0: 0