BLASTX 7.6.2
Query= RU25606 /QuerySize=637
(636 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G29250.1 | Symbols: | nucleic acid binding | ... 179 1e-045
TAIR9_protein||AT2G34160.1 | Symbols: | nucleic acid binding | ... 179 1e-045
TAIR9_protein||AT3G04620.1 | Symbols: | nucleic acid binding | ... 158 3e-039
>TAIR9_protein||AT1G29250.1 | Symbols: | nucleic acid binding |
chr1:10223461-10224592 REVERSE
Length = 131
Score = 179 bits (454), Expect = 1e-045
Identities = 93/113 (82%), Positives = 101/113 (89%), Gaps = 1/113 (0%)
Frame = +2
Query: 95 EITEAMNNVTINNSDSHKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATV 274
EITE +NN+ + D+ KKNRIQVSNTKKPLFFYVNLAKRYMQQY +VELSALGMAIATV
Sbjct: 3 EITEGVNNMNL-AVDTQKKNRIQVSNTKKPLFFYVNLAKRYMQQYTDVELSALGMAIATV 61
Query: 275 VTIAEILKNNGLAVEKKIMTSTVDIKDDSRGRPVQKAKIEILLGKTANFDDLM 433
VT+AEILKNNG AVEKKIMTSTVDIKDDSRGRPVQKAKIEI L K+ FD+LM
Sbjct: 62 VTVAEILKNNGFAVEKKIMTSTVDIKDDSRGRPVQKAKIEITLAKSEKFDELM 114
>TAIR9_protein||AT2G34160.1 | Symbols: | nucleic acid binding |
chr2:14426283-14427220 FORWARD
Length = 131
Score = 179 bits (453), Expect = 1e-045
Identities = 92/113 (81%), Positives = 102/113 (90%), Gaps = 1/113 (0%)
Frame = +2
Query: 95 EITEAMNNVTINNSDSHKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATV 274
EIT+ +NN+ + +DS KKNRIQVSNTKKPLFFYVNLAKRYMQQYN+VELSALGMAIATV
Sbjct: 3 EITDGVNNMNL-ATDSQKKNRIQVSNTKKPLFFYVNLAKRYMQQYNDVELSALGMAIATV 61
Query: 275 VTIAEILKNNGLAVEKKIMTSTVDIKDDSRGRPVQKAKIEILLGKTANFDDLM 433
VT+ EILKNNG AVEKKIMTSTVDIKDD+RGRPVQKAKIEI L K+ FD+LM
Sbjct: 62 VTVTEILKNNGFAVEKKIMTSTVDIKDDARGRPVQKAKIEITLVKSEKFDELM 114
>TAIR9_protein||AT3G04620.1 | Symbols: | nucleic acid binding |
chr3:1255660-1256739 REVERSE
Length = 165
Score = 158 bits (398), Expect = 3e-039
Identities = 77/99 (77%), Positives = 92/99 (92%)
Frame = +2
Query: 137 DSHKKNRIQVSNTKKPLFFYVNLAKRYMQQYNEVELSALGMAIATVVTIAEILKNNGLAV 316
++HKKNRIQVSNTKKPLFFYVNLAKRY+QQ+NEVELSALGMAI TVVTI+EILKNNGLA
Sbjct: 33 ETHKKNRIQVSNTKKPLFFYVNLAKRYIQQHNEVELSALGMAITTVVTISEILKNNGLAT 92
Query: 317 EKKIMTSTVDIKDDSRGRPVQKAKIEILLGKTANFDDLM 433
EKK++TSTV +KD+++G+ VQKAKIEI+LGK+ FD L+
Sbjct: 93 EKKVLTSTVGMKDETKGKMVQKAKIEIVLGKSDKFDSLV 131
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,403,461,098
Number of Sequences: 33410
Number of Extensions: 4403461098
Number of Successful Extensions: 241458331
Number of sequences better than 0.0: 0
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