BLASTX 7.6.2
Query= RU25623 /QuerySize=677
(676 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G23210.1 | Symbols: | basic helix-loop-helix ... 160 8e-040
TAIR9_protein||AT4G14410.1 | Symbols: | basic helix-loop-helix ... 154 7e-038
TAIR9_protein||AT4G14410.2 | Symbols: | basic helix-loop-helix ... 154 7e-038
TAIR9_protein||AT5G54680.1 | Symbols: ILR3 | ILR3 (iaa-leucine r... 129 2e-030
TAIR9_protein||AT1G51070.1 | Symbols: | basic helix-loop-helix ... 122 2e-028
TAIR9_protein||AT3G19860.1 | Symbols: | basic helix-loop-helix ... 75 4e-014
TAIR9_protein||AT3G19860.2 | Symbols: | basic helix-loop-helix ... 75 4e-014
TAIR9_protein||AT4G36060.1 | Symbols: | basic helix-loop-helix ... 67 1e-011
TAIR9_protein||AT4G36060.2 | Symbols: | basic helix-loop-helix ... 67 1e-011
TAIR9_protein||AT3G47640.1 | Symbols: | basic helix-loop-helix ... 52 4e-007
>TAIR9_protein||AT3G23210.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:8283255-8284915 REVERSE
Length = 321
Score = 160 bits (404), Expect = 8e-040
Identities = 83/123 (67%), Positives = 98/123 (79%)
Frame = +1
Query: 289 IEFSANSGVAAPSQTQEKQCPRKRGRTESWSGSGAKACREKLRRERLNDKFGDLSAVLEP 468
+E +++S V A + E++C KR RT S S G KACREKLRRE+LNDKF DLS+VLEP
Sbjct: 132 VEINSSSSVGAVKEEFEEECSGKRRRTGSCSKPGTKACREKLRREKLNDKFMDLSSVLEP 191
Query: 469 GRPAKTDKPAILDGAISVLTQLRAEAHELTQTNEKLLEEIKSLKAEKNELREEKVVLKAD 648
GR KTDK AILD AI V+ QLR EAHEL +TN+KLLEEIKSLKA+KNELREEK+VLKA+
Sbjct: 192 GRTPKTDKSAILDDAIRVVNQLRGEAHELQETNQKLLEEIKSLKADKNELREEKLVLKAE 251
Query: 649 KRK 657
K K
Sbjct: 252 KEK 254
>TAIR9_protein||AT4G14410.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:8300077-8301503 FORWARD
Length = 284
Score = 154 bits (387), Expect = 7e-038
Identities = 84/128 (65%), Positives = 98/128 (76%), Gaps = 4/128 (3%)
Frame = +1
Query: 286 EIEFSANSGVAAPSQTQE---KQCPRKRGRTESWS-GSGAKACREKLRRERLNDKFGDLS 453
E+E ++ S A + QE C RKR RT S S G G KACRE+LRRE+LN++F DLS
Sbjct: 95 EVEINSGSSGGAVKEEQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLS 154
Query: 454 AVLEPGRPAKTDKPAILDGAISVLTQLRAEAHELTQTNEKLLEEIKSLKAEKNELREEKV 633
+VLEPGR KTDKPAILD AI +L QLR EA +L +TN+KLLEEIKSLKAEKNELREEK+
Sbjct: 155 SVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKL 214
Query: 634 VLKADKRK 657
VLKADK K
Sbjct: 215 VLKADKEK 222
>TAIR9_protein||AT4G14410.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:8300418-8301503 FORWARD
Length = 278
Score = 154 bits (387), Expect = 7e-038
Identities = 84/128 (65%), Positives = 98/128 (76%), Gaps = 4/128 (3%)
Frame = +1
Query: 286 EIEFSANSGVAAPSQTQE---KQCPRKRGRTESWS-GSGAKACREKLRRERLNDKFGDLS 453
E+E ++ S A + QE C RKR RT S S G G KACRE+LRRE+LN++F DLS
Sbjct: 89 EVEINSGSSGGAVKEEQEHLDDDCSRKRARTGSCSRGGGTKACRERLRREKLNERFMDLS 148
Query: 454 AVLEPGRPAKTDKPAILDGAISVLTQLRAEAHELTQTNEKLLEEIKSLKAEKNELREEKV 633
+VLEPGR KTDKPAILD AI +L QLR EA +L +TN+KLLEEIKSLKAEKNELREEK+
Sbjct: 149 SVLEPGRTPKTDKPAILDDAIRILNQLRDEALKLEETNQKLLEEIKSLKAEKNELREEKL 208
Query: 634 VLKADKRK 657
VLKADK K
Sbjct: 209 VLKADKEK 216
>TAIR9_protein||AT5G54680.1 | Symbols: ILR3 | ILR3 (iaa-leucine resistant3); DNA
binding / transcription factor | chr5:22217270-22218993 FORWARD
Length = 235
Score = 129 bits (323), Expect = 2e-030
Identities = 71/140 (50%), Positives = 89/140 (63%), Gaps = 1/140 (0%)
Frame = +1
Query: 241 QFPNFLWSNPSPSFPEIEFSAN-SGVAAPSQTQEKQCPRKRGRTESWSGSGAKACREKLR 417
Q P F W P SA G A S+ ++ +KRGR ES S + +KACREK R
Sbjct: 24 QGPGFSWPVQQPIGVSSNSSAGVDGSAGNSEASKEPGSKKRGRCESSSATSSKACREKQR 83
Query: 418 RERLNDKFGDLSAVLEPGRPAKTDKPAILDGAISVLTQLRAEAHELTQTNEKLLEEIKSL 597
R+RLNDKF +L A+LEPG P KTDK AIL A+ ++TQLR EA +L +N L ++IK L
Sbjct: 84 RDRLNDKFMELGAILEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDKIKEL 143
Query: 598 KAEKNELREEKVVLKADKRK 657
K EKNELR+EK LK +K K
Sbjct: 144 KTEKNELRDEKQRLKTEKEK 163
>TAIR9_protein||AT1G51070.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:18928018-18929513 FORWARD
Length = 227
Score = 122 bits (305), Expect = 2e-028
Identities = 69/139 (49%), Positives = 93/139 (66%), Gaps = 6/139 (4%)
Frame = +1
Query: 259 WSNPSPSFP-EIEFSAN-----SGVAAPSQTQEKQCPRKRGRTESWSGSGAKACREKLRR 420
+S+ +P+FP +I+ SA G + ++ RKR +TES +GS +KACREK RR
Sbjct: 20 FSDQNPTFPWQIDGSATVSVEVDGFLCDADVIKEPSSRKRIKTESCTGSNSKACREKQRR 79
Query: 421 ERLNDKFGDLSAVLEPGRPAKTDKPAILDGAISVLTQLRAEAHELTQTNEKLLEEIKSLK 600
+RLNDKF +LS+VLEPGR KTDK AI++ AI ++ Q R EA +L N L E+IK LK
Sbjct: 80 DRLNDKFTELSSVLEPGRTPKTDKVAIINDAIRMVNQARDEAQKLKDLNSSLQEKIKELK 139
Query: 601 AEKNELREEKVVLKADKRK 657
EKNELR+EK LK +K +
Sbjct: 140 DEKNELRDEKQKLKVEKER 158
>TAIR9_protein||AT3G19860.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:6904579-6905863 FORWARD
Length = 285
Score = 75 bits (182), Expect = 4e-014
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 394 KACREKLRRERLNDKFGDLSAVLEPGRPAKTDKPAILDGAISVLTQLRAEAHELTQTNEK 573
KA REKLRRE+LN+ F +L VL+P RP K DK IL + +L +L +E ++L
Sbjct: 10 KAGREKLRREKLNEHFVELGNVLDPERP-KNDKATILTDTVQLLKELTSEVNKLKSEYTA 68
Query: 574 LLEEIKSLKAEKNELREEKVVLKAD 648
L +E + L EKN+LREEK LK+D
Sbjct: 69 LTDESRELTQEKNDLREEKTSLKSD 93
>TAIR9_protein||AT3G19860.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:6903842-6905863 FORWARD
Length = 338
Score = 75 bits (182), Expect = 4e-014
Identities = 41/85 (48%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Frame = +1
Query: 394 KACREKLRRERLNDKFGDLSAVLEPGRPAKTDKPAILDGAISVLTQLRAEAHELTQTNEK 573
KA REKLRRE+LN+ F +L VL+P RP K DK IL + +L +L +E ++L
Sbjct: 63 KAGREKLRREKLNEHFVELGNVLDPERP-KNDKATILTDTVQLLKELTSEVNKLKSEYTA 121
Query: 574 LLEEIKSLKAEKNELREEKVVLKAD 648
L +E + L EKN+LREEK LK+D
Sbjct: 122 LTDESRELTQEKNDLREEKTSLKSD 146
>TAIR9_protein||AT4G36060.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:17055397-17056567 FORWARD
Length = 287
Score = 67 bits (161), Expect = 1e-011
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 394 KACREKLRRERLNDKFGDLSAVLEPGRPAKTDKPAILDGAISVLTQLRAEAHELTQTNEK 573
KA REKLRR++L ++F +L L+P RP K+DK ++L I +L + + L E
Sbjct: 49 KAEREKLRRDKLKEQFLELGNALDPNRP-KSDKASVLTDTIQMLKDVMNQVDRLKAEYET 107
Query: 574 LLEEIKSLKAEKNELREEKVVLKAD 648
L +E + L EK+ELREEK LK+D
Sbjct: 108 LSQESRELIQEKSELREEKATLKSD 132
>TAIR9_protein||AT4G36060.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:17055521-17056567 FORWARD
Length = 269
Score = 67 bits (161), Expect = 1e-011
Identities = 37/85 (43%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Frame = +1
Query: 394 KACREKLRRERLNDKFGDLSAVLEPGRPAKTDKPAILDGAISVLTQLRAEAHELTQTNEK 573
KA REKLRR++L ++F +L L+P RP K+DK ++L I +L + + L E
Sbjct: 31 KAEREKLRRDKLKEQFLELGNALDPNRP-KSDKASVLTDTIQMLKDVMNQVDRLKAEYET 89
Query: 574 LLEEIKSLKAEKNELREEKVVLKAD 648
L +E + L EK+ELREEK LK+D
Sbjct: 90 LSQESRELIQEKSELREEKATLKSD 114
>TAIR9_protein||AT3G47640.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:17568035-17569101 FORWARD
Length = 241
Score = 52 bits (122), Expect = 4e-007
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Frame = +1
Query: 394 KACREKLRRERLNDKFGDLSAVLEPGRPAKTDKPAILDGAISVLTQLRAEAHELTQTNEK 573
KA RE+L+RE LN+ F +L+ LE + + K +IL A L + + L + +
Sbjct: 32 KAVRERLKREHLNELFIELADTLELNQ-QNSGKASILCEATRFLKDVFGQIESLRKEHAS 90
Query: 574 LLEEIKSLKAEKNELREEKVVLKADKRKARN 666
LL E + EKNEL+EE VL+ + K +N
Sbjct: 91 LLSESSYVTTEKNELKEETSVLETEISKLQN 121
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,403,461,098
Number of Sequences: 33410
Number of Extensions: 4403461098
Number of Successful Extensions: 241458331
Number of sequences better than 0.0: 0
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