BLASTX 7.6.2
Query= RU25918 /QuerySize=1348
(1347 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G12850.1 | Symbols: | zinc finger (CCCH-type)... 309 3e-084
TAIR9_protein||AT2G41900.1 | Symbols: | zinc finger (CCCH-type)... 253 2e-067
TAIR9_protein||AT5G58620.1 | Symbols: | zinc finger (CCCH-type)... 236 3e-062
TAIR9_protein||AT2G40140.1 | Symbols: CZF1, ZFAR1, SZF2, ATSZF2 ... 217 2e-056
TAIR9_protein||AT2G40140.2 | Symbols: CZF1, ZFAR1, SZF2, ATSZF2 ... 217 2e-056
TAIR9_protein||AT3G55980.1 | Symbols: SZF1, ATSZF1 | SZF1 (SALT-... 200 2e-051
TAIR9_protein||AT2G25900.1 | Symbols: ATCTH | ATCTH; transcripti... 178 7e-045
TAIR9_protein||AT2G19810.1 | Symbols: | zinc finger (CCCH-type)... 171 9e-043
TAIR9_protein||AT4G29190.1 | Symbols: | zinc finger (CCCH-type)... 169 6e-042
TAIR9_protein||AT1G03790.1 | Symbols: SOM | SOM (SOMNUS); nuclei... 160 2e-039
TAIR9_protein||AT5G44260.1 | Symbols: | zinc finger (CCCH-type)... 154 1e-037
TAIR9_protein||AT5G07500.1 | Symbols: PEI1 | PEI1; nucleic acid ... 152 6e-037
>TAIR9_protein||AT5G12850.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr5:4057068-4059188 FORWARD
Length = 707
Score = 309 bits (791), Expect = 3e-084
Identities = 163/308 (52%), Positives = 190/308 (61%), Gaps = 16/308 (5%)
Frame = -2
Query: 917 PSLPDIKNKHLCHR*VRMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVP 738
PSLPDIK+ RMFS K+RP SRAYSHDWTECPF H GENARRRDPRKFHY+CVP
Sbjct: 243 PSLPDIKSGIYSTDEFRMFSFKIRPCSRAYSHDWTECPFAHPGENARRRDPRKFHYTCVP 302
Query: 737 CPEFRKGACRRGGMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLY 558
CP+F+KG+C++G MCEYAHGVFECWLHPAQYRTRLCKDG CNRRVCFFAH +ELRPLY
Sbjct: 303 CPDFKKGSCKQGDMCEYAHGVFECWLHPAQYRTRLCKDGMGCNRRVCFFAHANEELRPLY 362
Query: 557 VSTGSAVPSPR-SSASGPTVMDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANG-ISQS 384
STGS +PSPR SSA + MDM NG + S
Sbjct: 363 PSTGSGLPSPRASSAVSASTMDM----ASVLNMLPGSPSAAQHSFTPPISPSGNGSMPHS 418
Query: 383 SVAWPHPNVPTLHLPGXXXXXXXXXXXXXXXDIPPENLNLLRELDAQQQLLNELNCFSQP 204
S+ WP N+P L+LPG DIP E L++L E + Q+QL +++
Sbjct: 419 SMGWPQQNIPALNLPGSNIQLSRLRSSLNARDIPSEQLSMLHEFEMQRQLAGDMH----- 473
Query: 203 RPSPISVGRSGRSKTLTPXXXXXXXXXXXXXXPRFSDHTA-ASVFSPTHKSAVLNQFQ-Q 30
SP + S R KTL P PRFSD A +SV SP+HKSA+LNQ Q
Sbjct: 474 --SPRFMNHSARPKTLNP-SNLEELFSAEVASPRFSDQLAVSSVLSPSHKSALLNQLQNN 530
Query: 29 QQSMLSPI 6
+QSMLSPI
Sbjct: 531 KQSMLSPI 538
Score = 102 bits (253), Expect = 7e-022
Identities = 46/76 (60%), Positives = 62/76 (81%)
Frame = -3
Query: 1342 PEADVNFSCGLDQSTALHCAASGGSVNAMDIVKLLLSAGANPSCMDASGHRPIDVIVVHP 1163
PEA++N SCG D+STALHCAASG SVN++D+VKLLLS GA+P+ DA G+RP+DV+VV P
Sbjct: 107 PEAELNLSCGPDKSTALHCAASGASVNSLDVVKLLLSVGADPNIPDAHGNRPVDVLVVSP 166
Query: 1162 KLQSMHSVLEELLSKN 1115
+ ++LEE+L K+
Sbjct: 167 HAPGLRTILEEILKKD 182
>TAIR9_protein||AT2G41900.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:17491352-17493502 FORWARD
Length = 717
Score = 253 bits (645), Expect = 2e-067
Identities = 114/134 (85%), Positives = 118/134 (88%)
Frame = -2
Query: 917 PSLPDIKNKHLCHR*VRMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVP 738
PSLPDIKN RM+S KVRP SRAYSHDWTECPFVH GENARRRDPRKFHYSCVP
Sbjct: 247 PSLPDIKNSIYATDEFRMYSFKVRPCSRAYSHDWTECPFVHPGENARRRDPRKFHYSCVP 306
Query: 737 CPEFRKGACRRGGMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLY 558
CP+FRKGACRRG MCEYAHGVFECWLHPAQYRTRLCKDGT C RRVCFFAHT +ELRPLY
Sbjct: 307 CPDFRKGACRRGDMCEYAHGVFECWLHPAQYRTRLCKDGTGCARRVCFFAHTPEELRPLY 366
Query: 557 VSTGSAVPSPRSSA 516
STGSAVPSPRS+A
Sbjct: 367 ASTGSAVPSPRSNA 380
Score = 110 bits (273), Expect = 3e-024
Identities = 64/138 (46%), Positives = 77/138 (55%), Gaps = 15/138 (10%)
Frame = -2
Query: 401 NGISQSSVAWPHPNVPTLHLPGXXXXXXXXXXXXXXXDIPPENLNLLRELDAQQQLLNEL 222
NG+S S++AWP PNVP LHLPG DIP + N+L + + QQQLLNE
Sbjct: 409 NGMSHSNMAWPQPNVPALHLPGSNLQSSRLRSSLNARDIPTDEFNMLADYE-QQQLLNEY 467
Query: 221 NCFSQPRPSPISVGRSGRSKTLTPXXXXXXXXXXXXXXPRFSDHTAAS-VFSPTHKSAVL 45
+ ++ RSGR K++ P PRF+D AS VFSPTHKSAV
Sbjct: 468 S---------NALSRSGRMKSMPPSNLEDLFSAEGSSSPRFTDSALASAVFSPTHKSAVF 518
Query: 44 NQF----QQQQSMLSPIN 3
NQF QQQQSMLSPIN
Sbjct: 519 NQFQQQQQQQQSMLSPIN 536
Score = 96 bits (238), Expect = 4e-020
Identities = 49/88 (55%), Positives = 66/88 (75%)
Frame = -3
Query: 1339 EADVNFSCGLDQSTALHCAASGGSVNAMDIVKLLLSAGANPSCMDASGHRPIDVIVVHPK 1160
+ADVN +CG DQ+TALHCAASGG+VNA+ +VKLLL+AGA+ + +DA G R DVIVV PK
Sbjct: 115 DADVNRACGNDQTTALHCAASGGAVNAIQVVKLLLAAGADLNLLDAEGQRAGDVIVVPPK 174
Query: 1159 LQSMHSVLEELLSKNASDGSASRLQFYT 1076
L+ + +L+ELLS + S + L+ T
Sbjct: 175 LEGVKLMLQELLSADGSSTAERNLRVVT 202
>TAIR9_protein||AT5G58620.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr5:23693959-23695782 FORWARD
Length = 608
Score = 236 bits (601), Expect = 3e-062
Identities = 115/197 (58%), Positives = 130/197 (65%), Gaps = 9/197 (4%)
Frame = -2
Query: 917 PSLPDIKNKHLCHR*VRMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVP 738
P+LPDIKN RM++ K++P SRAYSHDWTECPFVH GENARRRDPRK+HYSCVP
Sbjct: 195 PTLPDIKNGVYGTDEFRMYAFKIKPCSRAYSHDWTECPFVHPGENARRRDPRKYHYSCVP 254
Query: 737 CPEFRKGACRRGGMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLY 558
CPEFRKG+C RG CEYAHG+FECWLHPAQYRTRLCKD T+C+RRVCFFAH +ELRPLY
Sbjct: 255 CPEFRKGSCSRGDTCEYAHGIFECWLHPAQYRTRLCKDETNCSRRVCFFAHKPEELRPLY 314
Query: 557 VSTGSAVPSPRSSAS---GPTVMDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXANGISQ 387
STGS VPSPRSS S T DM G +
Sbjct: 315 PSTGSGVPSPRSSFSSCNSSTAFDMGPISPLPIGATTTPPLSPNGVSSPI------GGGK 368
Query: 386 SSVAWPHPNVPTLHLPG 336
+ + WP+ P L LPG
Sbjct: 369 TWMNWPNITPPALQLPG 385
Score = 71 bits (172), Expect = 2e-012
Identities = 39/75 (52%), Positives = 47/75 (62%), Gaps = 2/75 (2%)
Frame = -3
Query: 1333 DVNFSCGLDQSTALHCAASGGSVNAMDIVKLLLSAGANPSCMDASGHRPIDVI--VVHPK 1160
DVN SCG D +TALHCA SG S N+++IV LLL ANP DA G++P DVI + P
Sbjct: 84 DVNRSCGSDGATALHCAVSGLSANSLEIVTLLLKGSANPDSCDAYGNKPGDVIFPCLSPV 143
Query: 1159 LQSMHSVLEELLSKN 1115
+ VLE LL N
Sbjct: 144 FSARMKVLERLLKGN 158
>TAIR9_protein||AT2G40140.1 | Symbols: CZF1, ZFAR1, SZF2, ATSZF2 | CZF1;
transcription factor | chr2:16772537-16774330 FORWARD
Length = 598
Score = 217 bits (551), Expect = 2e-056
Identities = 101/141 (71%), Positives = 109/141 (77%)
Frame = -2
Query: 914 SLPDIKNKHLCHR*VRMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVPC 735
SLPDI RMFS KV+P SRAYSHDWTECPFVH GENARRRDPRK+ Y+CVPC
Sbjct: 201 SLPDINEGVYGTDDFRMFSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYTCVPC 260
Query: 734 PEFRKGACRRGGMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYV 555
PEFRKG+C +G CEYAHGVFE WLHPAQYRTRLCKD T C RRVCFFAH DELRP+
Sbjct: 261 PEFRKGSCPKGDSCEYAHGVFESWLHPAQYRTRLCKDETGCARRVCFFAHRRDELRPVNA 320
Query: 554 STGSAVPSPRSSASGPTVMDM 492
STGSA+ SPRSS P + M
Sbjct: 321 STGSAMVSPRSSNQSPEMSVM 341
Score = 65 bits (158), Expect = 7e-011
Identities = 27/54 (50%), Positives = 44/54 (81%)
Frame = -3
Query: 1336 ADVNFSCGLDQSTALHCAASGGSVNAMDIVKLLLSAGANPSCMDASGHRPIDVI 1175
+DVN C ++ TALHCA SG SV+ ++I+K+LL A A+P+C+DA+G++P+D++
Sbjct: 102 SDVNRVCSDEKVTALHCAVSGCSVSIVEIIKILLDASASPNCVDANGNKPVDLL 155
>TAIR9_protein||AT2G40140.2 | Symbols: CZF1, ZFAR1, SZF2, ATSZF2 | CZF1;
transcription factor | chr2:16772537-16774330 FORWARD
Length = 598
Score = 217 bits (551), Expect = 2e-056
Identities = 101/141 (71%), Positives = 109/141 (77%)
Frame = -2
Query: 914 SLPDIKNKHLCHR*VRMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVPC 735
SLPDI RMFS KV+P SRAYSHDWTECPFVH GENARRRDPRK+ Y+CVPC
Sbjct: 201 SLPDINEGVYGTDDFRMFSFKVKPCSRAYSHDWTECPFVHPGENARRRDPRKYPYTCVPC 260
Query: 734 PEFRKGACRRGGMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYV 555
PEFRKG+C +G CEYAHGVFE WLHPAQYRTRLCKD T C RRVCFFAH DELRP+
Sbjct: 261 PEFRKGSCPKGDSCEYAHGVFESWLHPAQYRTRLCKDETGCARRVCFFAHRRDELRPVNA 320
Query: 554 STGSAVPSPRSSASGPTVMDM 492
STGSA+ SPRSS P + M
Sbjct: 321 STGSAMVSPRSSNQSPEMSVM 341
Score = 65 bits (158), Expect = 7e-011
Identities = 27/54 (50%), Positives = 44/54 (81%)
Frame = -3
Query: 1336 ADVNFSCGLDQSTALHCAASGGSVNAMDIVKLLLSAGANPSCMDASGHRPIDVI 1175
+DVN C ++ TALHCA SG SV+ ++I+K+LL A A+P+C+DA+G++P+D++
Sbjct: 102 SDVNRVCSDEKVTALHCAVSGCSVSIVEIIKILLDASASPNCVDANGNKPVDLL 155
>TAIR9_protein||AT3G55980.1 | Symbols: SZF1, ATSZF1 | SZF1 (SALT-INDUCIBLE ZINC
FINGER 1); transcription factor | chr3:20776857-20778599 FORWARD
Length = 581
Score = 200 bits (507), Expect = 2e-051
Identities = 93/133 (69%), Positives = 104/133 (78%), Gaps = 1/133 (0%)
Frame = -2
Query: 914 SLPDIKNKHLCHR*VRMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVPC 735
SLPDI RM+S KV+P SRAYSHDWTEC FVH GENARRRDPRK+ Y+CVPC
Sbjct: 198 SLPDINEGVYGSDEFRMYSFKVKPCSRAYSHDWTECAFVHPGENARRRDPRKYPYTCVPC 257
Query: 734 PEFRKGACRRGGMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYV 555
PEFRKG+C +G CEYAHGVFE WLHPAQY+TRLCKD T C R+VCFFAH +E+RP+
Sbjct: 258 PEFRKGSCPKGDSCEYAHGVFESWLHPAQYKTRLCKDETGCARKVCFFAHKREEMRPVNA 317
Query: 554 STGSAV-PSPRSS 519
STGSAV SP SS
Sbjct: 318 STGSAVAQSPFSS 330
Score = 58 bits (139), Expect = 1e-008
Identities = 25/56 (44%), Positives = 42/56 (75%)
Frame = -3
Query: 1339 EADVNFSCGLDQSTALHCAASGGSVNAMDIVKLLLSAGANPSCMDASGHRPIDVIV 1172
++DVN +CG ++ T LHCA +G SVN ++++ +LL A A + +DA+G++P+DV V
Sbjct: 97 KSDVNRACGEERVTPLHCAVAGCSVNMIEVINVLLDASALVNSVDANGNQPLDVFV 152
>TAIR9_protein||AT2G25900.1 | Symbols: ATCTH | ATCTH; transcription factor |
chr2:11041817-11042764 FORWARD
Length = 316
Score = 178 bits (451), Expect = 7e-045
Identities = 77/122 (63%), Positives = 92/122 (75%)
Frame = -2
Query: 869 RMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVPCPEFRKGACRRGGMCE 690
R++ K+R +R SHDWTECPF H GE ARRRDPRKFHYS CPEFRKG+CRRG CE
Sbjct: 92 RIYEFKIRRCARGRSHDWTECPFAHPGEKARRRDPRKFHYSGTACPEFRKGSCRRGDSCE 151
Query: 689 YAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPRSSASG 510
++HGVFECWLHP++YRT+ CKDGTSC RR+CFFAHTT++LR L S + A+
Sbjct: 152 FSHGVFECWLHPSRYRTQPCKDGTSCRRRICFFAHTTEQLRVLPCSLDPDLGFFSGLATS 211
Query: 509 PT 504
PT
Sbjct: 212 PT 213
>TAIR9_protein||AT2G19810.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:8550419-8551498 FORWARD
Length = 360
Score = 171 bits (433), Expect = 9e-043
Identities = 71/103 (68%), Positives = 83/103 (80%)
Frame = -2
Query: 869 RMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVPCPEFRKGACRRGGMCE 690
RM+ KVR +R SHDWTECP+ H GE ARRRDPRKFHYS CPEFRKG C+RG CE
Sbjct: 80 RMYEFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKFHYSGTACPEFRKGCCKRGDACE 139
Query: 689 YAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPL 561
++HGVFECWLHPA+YRT+ CKDG +C RRVCFFAH+ D++R L
Sbjct: 140 FSHGVFECWLHPARYRTQPCKDGGNCRRRVCFFAHSPDQIRVL 182
>TAIR9_protein||AT4G29190.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr4:14392233-14393303 REVERSE
Length = 357
Score = 169 bits (426), Expect = 6e-042
Identities = 70/113 (61%), Positives = 87/113 (76%)
Frame = -2
Query: 869 RMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVPCPEFRKGACRRGGMCE 690
RM+ KVR +R SHDWTECP+ H GE ARRRDPRK+HYS CP+FRKG C++G CE
Sbjct: 81 RMYDFKVRRCARGRSHDWTECPYAHPGEKARRRDPRKYHYSGTACPDFRKGGCKKGDSCE 140
Query: 689 YAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPS 531
+AHGVFECWLHPA+YRT+ CKDG +C R++CFFAH+ D+LR L+ + V S
Sbjct: 141 FAHGVFECWLHPARYRTQPCKDGGNCLRKICFFAHSPDQLRFLHTRSPDRVDS 193
>TAIR9_protein||AT1G03790.1 | Symbols: SOM | SOM (SOMNUS); nucleic acid binding
/ transcription factor | chr1:954589-955770 FORWARD
Length = 394
Score = 160 bits (404), Expect = 2e-039
Identities = 74/118 (62%), Positives = 85/118 (72%), Gaps = 4/118 (3%)
Frame = -2
Query: 869 RMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVPCPEFRKGA-CRRGGMC 693
RMF K+R +R+ SHDWT+CPF H GE ARRRDPR+F YS CPEFR+G C RG C
Sbjct: 84 RMFEFKIRRCTRSRSHDWTDCPFAHPGEKARRRDPRRFQYSGEVCPEFRRGGDCSRGDDC 143
Query: 692 EYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELR---PLYVSTGSAVPSP 528
E+AHGVFECWLHP +YRT CKDG C R+VCFFAH+ +LR P VS SA PSP
Sbjct: 144 EFAHGVFECWLHPIRYRTEACKDGKHCKRKVCFFAHSPRQLRVLPPENVSGVSASPSP 201
>TAIR9_protein||AT5G44260.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr5:17829974-17831119 REVERSE
Length = 382
Score = 154 bits (389), Expect = 1e-037
Identities = 70/121 (57%), Positives = 84/121 (69%), Gaps = 8/121 (6%)
Frame = -2
Query: 869 RMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVPCPEF-RKGACRRGGMC 693
RM+ K+R +R+ SHDWT+CPF H GE ARRRDPR+FHY+ CPEF R G C RG C
Sbjct: 62 RMYEFKIRRCTRSRSHDWTDCPFSHPGEKARRRDPRRFHYTGEVCPEFSRHGDCSRGDEC 121
Query: 692 EYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELRPLYVSTGSAVPSPRSSAS 513
+AHGVFECWLHP++YRT CKDG C R+VCFFAH+ +LR L PSP + S
Sbjct: 122 GFAHGVFECWLHPSRYRTEACKDGKHCKRKVCFFAHSPRQLRVL-------PPSPENHIS 174
Query: 512 G 510
G
Sbjct: 175 G 175
>TAIR9_protein||AT5G07500.1 | Symbols: PEI1 | PEI1; nucleic acid binding /
transcription factor/ zinc-mediated transcriptional activator |
chr5:2372716-2373453 FORWARD
Length = 246
Score = 152 bits (383), Expect = 6e-037
Identities = 65/117 (55%), Positives = 80/117 (68%)
Frame = -2
Query: 917 PSLPDIKNKHLCHR*VRMFSLKVRPGSRAYSHDWTECPFVH.GENARRRDPRKFHYSCVP 738
PS+P+I + RM++ K++ R SHDWTECP+ H GE A RRDPR++ Y V
Sbjct: 38 PSIPNIDDAIYGSDEFRMYAYKIKRCPRTRSHDWTECPYAHRGEKATRRDPRRYTYCAVA 97
Query: 737 CPEFRKGACRRGGMCEYAHGVFECWLHPAQYRTRLCKDGTSCNRRVCFFAHTTDELR 567
CP FR GAC RG CE+AHGVFE WLHPA+YRTR C G C R+VCFFAH ++LR
Sbjct: 98 CPAFRNGACHRGDSCEFAHGVFEYWLHPARYRTRACNAGNLCQRKVCFFAHAPEQLR 154
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,432,020,814
Number of Sequences: 33410
Number of Extensions: 4432020814
Number of Successful Extensions: 241540594
Number of sequences better than 0.0: 0
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