BLASTX 7.6.2
Query= RU26145 /QuerySize=1112
(1111 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G34350.1 | Symbols: CLB6, ISPH, HDR | HDR (4-H... 319 3e-087
>TAIR9_protein||AT4G34350.1 | Symbols: CLB6, ISPH, HDR | HDR
(4-HYDROXY-3-METHYLBUT-2-ENYL DIPHOSPHATE REDUCTASE);
4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase/
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
chr4:16428681-16431038 REVERSE
Length = 467
Score = 319 bits (815), Expect = 3e-087
Identities = 180/343 (52%), Positives = 224/343 (65%), Gaps = 27/343 (7%)
Frame = +2
Query: 98 RTDVF-SPHSLAGSVCFRSRNSLSVKC-SGDSSA-----AVESDFDAKVFRKNLTRSKNY 256
R D F + L+GS R R +LSV+C SGD +A ++SDFDAKVFRKNLTRS NY
Sbjct: 13 RPDTFVRENHLSGSGSLRRRKALSVRCSSGDENAPSPSVVMDSDFDAKVFRKNLTRSDNY 72
Query: 257 NXXXXXXXXXXXXAHEPRIHQ*CY*EAEGERVRVHLGKRDREXXXXXXXXXXXXXSRADC 436
N H+ + E + + K + + C
Sbjct: 73 N--------RKGFGHKEETLKLMNREYTSDILETL--KTNGYTYSWGDVTVKLAKAYGFC 122
Query: 437 LRGQKAISS*EDLDYQRDHSQSDRQ*EVGGDGGEN----------IPIEEGRKQFEVVDK 586
++A+ + Q + E+ + N IP+E+ +KQF+VV+K
Sbjct: 123 WGVERAVQIAYEARKQFPEERLWITNEIIHNPTVNKRLEDMDVKIIPVEDSKKQFDVVEK 182
Query: 587 GDVVILPAFGAAVDEMLSLSDRNVQIVDTTCPWVSKVWNTVEKHKKGDYTSIIHGKYAHE 766
DVVILPAFGA VDEM L+D+ VQIVDTTCPWV+KVWNTVEKHKKG+YTS+IHGKY HE
Sbjct: 183 DDVVILPAFGAGVDEMYVLNDKKVQIVDTTCPWVTKVWNTVEKHKKGEYTSVIHGKYNHE 242
Query: 767 ETVATASFAGKYVIVKNMDEASYVCDYILGGELNGSSSTREAFLEKFKKAVSPGFDPDRD 946
ET+ATASFAGKY+IVKNM EA+YVCDYILGG+ +GSSST+E F+EKFK A+S GFDPD D
Sbjct: 243 ETIATASFAGKYIIVKNMKEANYVCDYILGGQYDGSSSTKEEFMEKFKYAISKGFDPDND 302
Query: 947 LIKCGIANQTTMLKGETEDIGKLVEKTMMRKYGVENVNDHFVS 1075
L+K GIANQTTMLKGETE+IG+L+E TMMRKYGVENV+ HF+S
Sbjct: 303 LVKVGIANQTTMLKGETEEIGRLLETTMMRKYGVENVSGHFIS 345
Score = 167 bits (421), Expect = 2e-041
Identities = 75/92 (81%), Positives = 87/92 (94%)
Frame = +3
Query: 264 EGSGHKEETLELMNREYTSDVIKKLKENGFEYTWGNVTVKLAEAYGFCWGVERAVQIAYE 443
+G GHKEETL+LMNREYTSD+++ LK NG+ Y+WG+VTVKLA+AYGFCWGVERAVQIAYE
Sbjct: 75 KGFGHKEETLKLMNREYTSDILETLKTNGYTYSWGDVTVKLAKAYGFCWGVERAVQIAYE 134
Query: 444 ARKQFPVERIWITNEIIHNPTVNKRLEEMEVK 539
ARKQFP ER+WITNEIIHNPTVNKRLE+M+VK
Sbjct: 135 ARKQFPEERLWITNEIIHNPTVNKRLEDMDVK 166
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,460,487,890
Number of Sequences: 33410
Number of Extensions: 4460487890
Number of Successful Extensions: 241606193
Number of sequences better than 0.0: 0
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