BLASTX 7.6.2 Query= RU26759 /QuerySize=921 (920 letters) Database: TAIR9 protein; 33,410 sequences; 13,468,323 total letters Score E Sequences producing significant alignments: (bits) Value TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 135 5e-032 TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 135 5e-032 TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 135 5e-032 TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 123 2e-028 TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 123 2e-028 TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 120 1e-027 TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 105 6e-023 TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 105 6e-023 TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 105 6e-023 TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 101 7e-022 TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 101 7e-022 TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 101 7e-022 TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 |... 92 4e-019 TAIR9_protein||AT4G23800.1 | Symbols: | high mobility group (HM... 62 6e-010 TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcripti... 62 6e-010 TAIR9_protein||AT2G34450.1 | Symbols: | high mobility group (HM... 57 1e-008 TAIR9_protein||AT2G34450.2 | Symbols: | high mobility group (HM... 54 1e-007 TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HM... 48 7e-006 >TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr1:7177282-7178487 FORWARD Length = 145 Score = 135 bits (338), Expect = 5e-032 Identities = 67/113 (59%), Positives = 77/113 (68%) Frame = +3 Query: 186 MKGGKSNTKKADSKLAVNKKPAKATRASKKAVKDPNKPKRPASAFFVFMEEFRKQFNKEN 365 MKG KS T+ SKL+V KKPAK K A KDPNKPKRPASAFFVFME+FR+ F KEN Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60 Query: 366 PNNXXXXXXXXXXXXXXXXMSEAEKAPYVAKSDKRKVEYEKLMKAYNMKQAEG 524 P N +S++EKAPYVAK++KRKVEYEK +KAYN K EG Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEG 113 >TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr1:7177282-7178487 FORWARD Length = 143 Score = 135 bits (338), Expect = 5e-032 Identities = 67/113 (59%), Positives = 77/113 (68%) Frame = +3 Query: 186 MKGGKSNTKKADSKLAVNKKPAKATRASKKAVKDPNKPKRPASAFFVFMEEFRKQFNKEN 365 MKG KS T+ SKL+V KKPAK K A KDPNKPKRPASAFFVFME+FR+ F KEN Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60 Query: 366 PNNXXXXXXXXXXXXXXXXMSEAEKAPYVAKSDKRKVEYEKLMKAYNMKQAEG 524 P N +S++EKAPYVAK++KRKVEYEK +KAYN K EG Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEG 113 >TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr1:7177282-7178487 FORWARD Length = 144 Score = 135 bits (338), Expect = 5e-032 Identities = 67/113 (59%), Positives = 77/113 (68%) Frame = +3 Query: 186 MKGGKSNTKKADSKLAVNKKPAKATRASKKAVKDPNKPKRPASAFFVFMEEFRKQFNKEN 365 MKG KS T+ SKL+V KKPAK K A KDPNKPKRPASAFFVFME+FR+ F KEN Sbjct: 1 MKGAKSKTETRSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60 Query: 366 PNNXXXXXXXXXXXXXXXXMSEAEKAPYVAKSDKRKVEYEKLMKAYNMKQAEG 524 P N +S++EKAPYVAK++KRKVEYEK +KAYN K EG Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEG 113 >TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr1:7179825-7181174 FORWARD Length = 142 Score = 123 bits (308), Expect = 2e-028 Identities = 63/113 (55%), Positives = 76/113 (67%), Gaps = 3/113 (2%) Frame = +3 Query: 186 MKGGKSNTKKADSKLAVNKKPAKATRASKKAVKDPNKPKRPASAFFVFMEEFRKQFNKEN 365 MKG KS + +KL+V KKPAK +K A KDPNKPKRP+SAFFVFME+FR + +E+ Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAK---GAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEH 57 Query: 366 PNNXXXXXXXXXXXXXXXXMSEAEKAPYVAKSDKRKVEYEKLMKAYNMKQAEG 524 P N +S++EKAPYVAK+DKRKVEYEK MKAYN K EG Sbjct: 58 PKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEG 110 >TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr1:7179825-7181170 FORWARD Length = 141 Score = 123 bits (308), Expect = 2e-028 Identities = 63/113 (55%), Positives = 76/113 (67%), Gaps = 3/113 (2%) Frame = +3 Query: 186 MKGGKSNTKKADSKLAVNKKPAKATRASKKAVKDPNKPKRPASAFFVFMEEFRKQFNKEN 365 MKG KS + +KL+V KKPAK +K A KDPNKPKRP+SAFFVFME+FR + +E+ Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAK---GAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEH 57 Query: 366 PNNXXXXXXXXXXXXXXXXMSEAEKAPYVAKSDKRKVEYEKLMKAYNMKQAEG 524 P N +S++EKAPYVAK+DKRKVEYEK MKAYN K EG Sbjct: 58 PKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKKLEEG 110 >TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr1:7179825-7181193 FORWARD Length = 148 Score = 120 bits (300), Expect = 1e-027 Identities = 61/109 (55%), Positives = 74/109 (67%), Gaps = 3/109 (2%) Frame = +3 Query: 186 MKGGKSNTKKADSKLAVNKKPAKATRASKKAVKDPNKPKRPASAFFVFMEEFRKQFNKEN 365 MKG KS + +KL+V KKPAK +K A KDPNKPKRP+SAFFVFME+FR + +E+ Sbjct: 1 MKGAKSKAETRSTKLSVTKKPAK---GAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEH 57 Query: 366 PNNXXXXXXXXXXXXXXXXMSEAEKAPYVAKSDKRKVEYEKLMKAYNMK 512 P N +S++EKAPYVAK+DKRKVEYEK MKAYN K Sbjct: 58 PKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNMKAYNKK 106 >TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY GROUP B 4); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr2:7642486-7643468 REVERSE Length = 139 Score = 105 bits (260), Expect = 6e-023 Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 3/113 (2%) Frame = +3 Query: 186 MKGGKSNTKKADSKLAVNKKPAKATRASKKAVKDPNKPKRPASAFFVFMEEFRKQFNKEN 365 MKGG+S KA++ + + +A KK KDPN+PKRP SAFFVF+E+FRK+FN N Sbjct: 1 MKGGES---KAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLAN 57 Query: 366 PNNXXXXXXXXXXXXXXXXMSEAEKAPYVAKSDKRKVEYEKLMKAYNMKQAEG 524 PNN M++ +KAPYVAK++ RK EY K ++ YN+K A G Sbjct: 58 PNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASG 110 >TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY GROUP B 4); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr2:7642486-7643468 REVERSE Length = 139 Score = 105 bits (260), Expect = 6e-023 Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 3/113 (2%) Frame = +3 Query: 186 MKGGKSNTKKADSKLAVNKKPAKATRASKKAVKDPNKPKRPASAFFVFMEEFRKQFNKEN 365 MKGG+S KA++ + + +A KK KDPN+PKRP SAFFVF+E+FRK+FN N Sbjct: 1 MKGGES---KAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLAN 57 Query: 366 PNNXXXXXXXXXXXXXXXXMSEAEKAPYVAKSDKRKVEYEKLMKAYNMKQAEG 524 PNN M++ +KAPYVAK++ RK EY K ++ YN+K A G Sbjct: 58 PNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASG 110 >TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY GROUP B 4); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr2:7642486-7643468 REVERSE Length = 135 Score = 105 bits (260), Expect = 6e-023 Identities = 52/113 (46%), Positives = 70/113 (61%), Gaps = 3/113 (2%) Frame = +3 Query: 186 MKGGKSNTKKADSKLAVNKKPAKATRASKKAVKDPNKPKRPASAFFVFMEEFRKQFNKEN 365 MKGG+S KA++ + + +A KK KDPN+PKRP SAFFVF+E+FRK+FN N Sbjct: 1 MKGGES---KAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLAN 57 Query: 366 PNNXXXXXXXXXXXXXXXXMSEAEKAPYVAKSDKRKVEYEKLMKAYNMKQAEG 524 PNN M++ +KAPYVAK++ RK EY K ++ YN+K A G Sbjct: 58 PNNKSVATVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNVQQYNLKLASG 110 >TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr3:19247241-19248491 REVERSE Length = 179 Score = 101 bits (251), Expect = 7e-022 Identities = 55/107 (51%), Positives = 63/107 (58%), Gaps = 1/107 (0%) Frame = +3 Query: 210 KKADSKLAVNKKPAK-ATRASKKAVKDPNKPKRPASAFFVFMEEFRKQFNKENPNNXXXX 386 +K + A +KP K TR KKA KDPNKPKR SAFFVF+E+FR F KENPN Sbjct: 23 RKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVS 82 Query: 387 XXXXXXXXXXXXMSEAEKAPYVAKSDKRKVEYEKLMKAYNMKQAEGN 527 MS+AEKAPY K+ KRK EYEK M AYN EG+ Sbjct: 83 AVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEGS 129 >TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr3:19247241-19248491 REVERSE Length = 186 Score = 101 bits (251), Expect = 7e-022 Identities = 55/107 (51%), Positives = 63/107 (58%), Gaps = 1/107 (0%) Frame = +3 Query: 210 KKADSKLAVNKKPAK-ATRASKKAVKDPNKPKRPASAFFVFMEEFRKQFNKENPNNXXXX 386 +K + A +KP K TR KKA KDPNKPKR SAFFVF+E+FR F KENPN Sbjct: 23 RKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVS 82 Query: 387 XXXXXXXXXXXXMSEAEKAPYVAKSDKRKVEYEKLMKAYNMKQAEGN 527 MS+AEKAPY K+ KRK EYEK M AYN EG+ Sbjct: 83 AVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEGS 129 >TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr3:19247241-19248491 REVERSE Length = 179 Score = 101 bits (251), Expect = 7e-022 Identities = 55/107 (51%), Positives = 63/107 (58%), Gaps = 1/107 (0%) Frame = +3 Query: 210 KKADSKLAVNKKPAK-ATRASKKAVKDPNKPKRPASAFFVFMEEFRKQFNKENPNNXXXX 386 +K + A +KP K TR KKA KDPNKPKR SAFFVF+E+FR F KENPN Sbjct: 23 RKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVS 82 Query: 387 XXXXXXXXXXXXMSEAEKAPYVAKSDKRKVEYEKLMKAYNMKQAEGN 527 MS+AEKAPY K+ KRK EYEK M AYN EG+ Sbjct: 83 AVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQMDAYNKNLEEGS 129 >TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 | HMGB5 (HIGH MOBILITY GROUP B 5); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr4:16887363-16888184 REVERSE Length = 126 Score = 92 bits (227), Expect = 4e-019 Identities = 44/110 (40%), Positives = 64/110 (58%), Gaps = 1/110 (0%) Frame = +3 Query: 198 KSNTKKADSKLAVNKKPAKATRASKKAVKDPNKPKRPASAFFVFMEEFRKQFNKENPNNX 377 K N + +S+ ++ + + KK KDPN+PK+P S FFVF+++FRK+FN NP+N Sbjct: 2 KDNQTEVESRSTDDRLKVRGNKVGKK-TKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNK 60 Query: 378 XXXXXXXXXXXXXXXMSEAEKAPYVAKSDKRKVEYEKLMKAYNMKQAEGN 527 M+E E+AP+VAKS +K EY M+ YNM+ A GN Sbjct: 61 SVGNVGRAAGKKWKTMTEEERAPFVAKSQSKKTEYAVTMQQYNMELANGN 110 >TAIR9_protein||AT4G23800.1 | Symbols: | high mobility group (HMG1/2) family protein | chr4:12390228-12392516 FORWARD Length = 457 Score = 62 bits (148), Expect = 6e-010 Identities = 34/92 (36%), Positives = 48/92 (52%), Gaps = 1/92 (1%) Frame = +3 Query: 243 KPAKATRASKKAVKDPNKPKRPASAFFVFMEEFRKQFNKENPNNXXXXXXXXXXXXXXXX 422 K KAT+ K DPNKPK+PAS++F+F ++ RK+ +E P Sbjct: 361 KKEKATKKKKNENVDPNKPKKPASSYFLFSKDERKKLTEERP-GTNNATVTALISLKWKE 419 Query: 423 MSEAEKAPYVAKSDKRKVEYEKLMKAYNMKQA 518 +SE EK Y K+ K Y+K ++AYN K A Sbjct: 420 LSEEEKQVYNGKAAKLMEAYKKEVEAYNKKSA 451 >TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcription factor | chr5:7888712-7890111 REVERSE Length = 242 Score = 62 bits (148), Expect = 6e-010 Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 3/133 (2%) Frame = +3 Query: 123 SVFQRSRFNFS*SDLQTAGIAMKGGKSNTKKADSKLAVNKKPAKATRASKKAVKDPNKPK 302 S+ + R N ++T A K K KK + K K T KK+ NKPK Sbjct: 59 SLDAKIRVNLEAQVVETQAEAKK--KPAEKKKTTSDGPKPKRLKKTNDEKKSSSTSNKPK 116 Query: 303 RPASAFFVFMEEFRKQFNKENPNNXXXXXXXXXXXXXXXXMSEAEKAPYVAKSDKRKVEY 482 RP +AFF+FM +FRK F E+ N ++E EK Y+ K+ + K EY Sbjct: 117 RPLTAFFIFMSDFRKTFKSEH-NGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEY 175 Query: 483 EKLMKAYNMKQAE 521 K +++ + + E Sbjct: 176 NKSLESNDADEEE 188 >TAIR9_protein||AT2G34450.1 | Symbols: | high mobility group (HMG1/2) family protein | chr2:14527918-14529448 REVERSE Length = 152 Score = 57 bits (137), Expect = 1e-008 Identities = 34/116 (29%), Positives = 56/116 (48%), Gaps = 3/116 (2%) Frame = +3 Query: 180 IAMKGGKSNTKKADSKLAVNKKPAKATRASKKAVKDPNK-PKRPASAFFVFMEEFRKQFN 356 +A+K + + +L +KP T KK VK K PK+PA+AFF F+++FRKQ+ Sbjct: 25 LAVKSSEGARRSTRLRLQPLRKP--KTSPKKKPVKLQTKMPKKPATAFFFFLDDFRKQYQ 82 Query: 357 KENPNNXXXXXXXXXXXXXXXXMSEAEKAPYVAKSDKRKVEYEKLMKAYNMKQAEG 524 +ENP+ M+ EK Y + +++ E+ + M Y + G Sbjct: 83 EENPDVKSMREIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHRAMTEYTKRMESG 138 >TAIR9_protein||AT2G34450.2 | Symbols: | high mobility group (HMG1/2) family protein | chr2:14527918-14529448 REVERSE Length = 153 Score = 54 bits (128), Expect = 1e-007 Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 4/117 (3%) Frame = +3 Query: 180 IAMKGGKSNTKKADSKLAVNKKPAKATRASKKAVKDPNK-PKRPASAFFVFMEEFRKQFN 356 +A+K + + +L +KP T KK VK K PK+PA+AFF F+++FRKQ+ Sbjct: 25 LAVKSSEGARRSTRLRLQPLRKP--KTSPKKKPVKLQTKMPKKPATAFFFFLDDFRKQYQ 82 Query: 357 KENPN-NXXXXXXXXXXXXXXXXMSEAEKAPYVAKSDKRKVEYEKLMKAYNMKQAEG 524 +ENP+ M+ EK Y + +++ E+ + M Y + G Sbjct: 83 EENPDVKSMREVIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHRAMTEYTKRMESG 139 >TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HMG1/2) family protein | chr4:6760898-6763272 REVERSE Length = 447 Score = 48 bits (113), Expect = 7e-006 Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 3/99 (3%) Frame = +3 Query: 210 KKADSKLAVNKKPAKATRASKKAVKDPNKPKRPASAFFVFMEEFRKQFNKENPNNXXXXX 389 +K D+ + K+ AK + ++ DPNKPK+P S++F+F ++ RK +E+P Sbjct: 345 EKTDNIIKKTKETAKNKKKNENV--DPNKPKKPTSSYFLFCKDARKSVLEEHP-GINNST 401 Query: 390 XXXXXXXXXXXMSEAEKAPYVAKSDKRKVEYEKLMKAYN 506 + E EK Y +K+ + Y+K ++ YN Sbjct: 402 VTAHISLKWMELGEEEKQVYNSKAAELMEAYKKEVEEYN 440 Database: TAIR9 protein Posted date: Wed Jul 08 15:16:08 2009 Number of letters in database: 13,468,323 Number of sequences in database: 33,410 Lambda K H 0.267 0.041 0.140 Gapped Lambda K H 0.267 0.041 0.140 Matrix: blosum62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,546,126,115 Number of Sequences: 33410 Number of Extensions: 4546126115 Number of Successful Extensions: 246676772 Number of sequences better than 0.0: 0 |