BLASTX 7.6.2
Query= RU26786 /QuerySize=777
(776 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G53020.1 | Symbols: STV1, RPL24B, RPL24 | STV1... 204 6e-053
TAIR9_protein||AT2G36620.1 | Symbols: RPL24A | RPL24A (ribosomal... 204 8e-053
TAIR9_protein||AT2G44860.1 | Symbols: | 60S ribosomal protein L... 75 4e-014
TAIR9_protein||AT2G44860.2 | Symbols: | 60S ribosomal protein L... 75 4e-014
>TAIR9_protein||AT3G53020.1 | Symbols: STV1, RPL24B, RPL24 | STV1 (SHORT
VALVE1); structural constituent of ribosome | chr3:19660749-19661912
REVERSE
Length = 164
Score = 204 bits (518), Expect = 6e-053
Identities = 98/112 (87%), Positives = 107/112 (95%)
Frame = +1
Query: 100 MVLKTELCRFSGAKIYPGSGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKITWTAMFRKL 279
MVLKTELCRFSG KIYPG GIRFIRSDSQVFLF+NSKCKRYFHN+LKPSK+ WTAM+RK
Sbjct: 1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLAWTAMYRKQ 60
Query: 280 HKKDSAQESVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 435
HKKD+AQE+VK++RRATKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAAL
Sbjct: 61 HKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAAL 112
>TAIR9_protein||AT2G36620.1 | Symbols: RPL24A | RPL24A (ribosomal protein L24);
structural constituent of ribosome | chr2:15350548-15351819 REVERSE
Length = 165
Score = 204 bits (517), Expect = 8e-053
Identities = 98/112 (87%), Positives = 107/112 (95%)
Frame = +1
Query: 100 MVLKTELCRFSGAKIYPGSGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKITWTAMFRKL 279
MVLKTELCRFSG KIYPG GIRFIRSDSQVFLF+NSKCKRYFHN+LKPSK+ WTAM+RK
Sbjct: 1 MVLKTELCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCKRYFHNKLKPSKLCWTAMYRKQ 60
Query: 280 HKKDSAQESVKKKRRATKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 435
HKKD+AQE+VK++RRATKKPYSRSIVGATLEVIQK+R EKPEVRDAAREAAL
Sbjct: 61 HKKDAAQEAVKRRRRATKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAAL 112
>TAIR9_protein||AT2G44860.1 | Symbols: | 60S ribosomal protein L24, putative |
chr2:18501034-18502128 REVERSE
Length = 160
Score = 75 bits (183), Expect = 4e-014
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Frame = +1
Query: 106 LKTELCRFSGAKIYPGSGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKITWTAMFRKLHK 285
++ E C F + IYPG GI+F+R+D+++F F SKC + F + P K+ WT FR H
Sbjct: 1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHG 60
Query: 286 KDSAQESV--KKKRRATKKPYSRSIVGATLEVIQK 384
KD +++ +K+R + Y R++ TL I+K
Sbjct: 61 KDMTKDTTFEFEKKRNRPERYDRNVTENTLMAIKK 95
>TAIR9_protein||AT2G44860.2 | Symbols: | 60S ribosomal protein L24, putative |
chr2:18501034-18502128 REVERSE
Length = 160
Score = 75 bits (183), Expect = 4e-014
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Frame = +1
Query: 106 LKTELCRFSGAKIYPGSGIRFIRSDSQVFLFVNSKCKRYFHNRLKPSKITWTAMFRKLHK 285
++ E C F + IYPG GI+F+R+D+++F F SKC + F + P K+ WT FR H
Sbjct: 1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPRKVKWTKAFRAAHG 60
Query: 286 KDSAQESV--KKKRRATKKPYSRSIVGATLEVIQK 384
KD +++ +K+R + Y R++ TL I+K
Sbjct: 61 KDMTKDTTFEFEKKRNRPERYDRNVTENTLMAIKK 95
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,604,738,094
Number of Sequences: 33410
Number of Extensions: 4604738094
Number of Successful Extensions: 252423256
Number of sequences better than 0.0: 0
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