BLASTX 7.6.2 Query= RU26806 /QuerySize=821 (820 letters) Database: TAIR9 protein; 33,410 sequences; 13,468,323 total letters Score E Sequences producing significant alignments: (bits) Value TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 141 9e-034 TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 141 9e-034 TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 138 7e-033 TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 137 9e-033 TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 137 9e-033 TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 137 9e-033 TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 122 3e-028 TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 122 3e-028 TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 122 3e-028 TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 113 1e-025 TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 113 1e-025 TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 113 1e-025 TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 |... 94 1e-019 TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcripti... 80 2e-015 TAIR9_protein||AT2G34450.1 | Symbols: | high mobility group (HM... 75 4e-014 TAIR9_protein||AT4G23800.1 | Symbols: | high mobility group (HM... 72 5e-013 TAIR9_protein||AT2G34450.2 | Symbols: | high mobility group (HM... 71 8e-013 TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HM... 68 5e-012 TAIR9_protein||AT3G28730.1 | Symbols: ATHMG, SSRP1, NFD | ATHMG ... 64 1e-010 >TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr1:7179825-7181174 FORWARD Length = 142 Score = 141 bits (353), Expect = 9e-034 Identities = 66/80 (82%), Positives = 71/80 (88%) Frame = +1 Query: 232 DPNKPKRPASAFFVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAE 411 DPNKPKRP+SAFFVFME+FR YK+EHP NKSVAAVGKAGGEKWKSLSD+EKAPY AKA+ Sbjct: 31 DPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKAD 90 Query: 412 KRKVEYNKNMDVYNKKQAEG 471 KRKVEY KNM YNKK EG Sbjct: 91 KRKVEYEKNMKAYNKKLEEG 110 >TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr1:7179825-7181170 FORWARD Length = 141 Score = 141 bits (353), Expect = 9e-034 Identities = 66/80 (82%), Positives = 71/80 (88%) Frame = +1 Query: 232 DPNKPKRPASAFFVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAE 411 DPNKPKRP+SAFFVFME+FR YK+EHP NKSVAAVGKAGGEKWKSLSD+EKAPY AKA+ Sbjct: 31 DPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKAD 90 Query: 412 KRKVEYNKNMDVYNKKQAEG 471 KRKVEY KNM YNKK EG Sbjct: 91 KRKVEYEKNMKAYNKKLEEG 110 >TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY GROUP B 3); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr1:7179825-7181193 FORWARD Length = 148 Score = 138 bits (345), Expect = 7e-033 Identities = 64/76 (84%), Positives = 69/76 (90%) Frame = +1 Query: 232 DPNKPKRPASAFFVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAE 411 DPNKPKRP+SAFFVFME+FR YK+EHP NKSVAAVGKAGGEKWKSLSD+EKAPY AKA+ Sbjct: 31 DPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVAAVGKAGGEKWKSLSDSEKAPYVAKAD 90 Query: 412 KRKVEYNKNMDVYNKK 459 KRKVEY KNM YNKK Sbjct: 91 KRKVEYEKNMKAYNKK 106 >TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr1:7177282-7178487 FORWARD Length = 145 Score = 137 bits (344), Expect = 9e-033 Identities = 69/113 (61%), Positives = 78/113 (69%), Gaps = 1/113 (0%) Frame = +1 Query: 133 KGGKSRAAAPKRSDTKLXXXXXXXXXXXXXXXXDPNKPKRPASAFFVFMEEFREKYKKEH 312 KG KS+ + S + DPNKPKRPASAFFVFME+FRE +KKE+ Sbjct: 2 KGAKSKTET-RSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60 Query: 313 PNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 471 P NKSVA VGKA G+KWKSLSD+EKAPY AKAEKRKVEY KN+ YNKK EG Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEG 113 >TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr1:7177282-7178487 FORWARD Length = 143 Score = 137 bits (344), Expect = 9e-033 Identities = 69/113 (61%), Positives = 78/113 (69%), Gaps = 1/113 (0%) Frame = +1 Query: 133 KGGKSRAAAPKRSDTKLXXXXXXXXXXXXXXXXDPNKPKRPASAFFVFMEEFREKYKKEH 312 KG KS+ + S + DPNKPKRPASAFFVFME+FRE +KKE+ Sbjct: 2 KGAKSKTET-RSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60 Query: 313 PNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 471 P NKSVA VGKA G+KWKSLSD+EKAPY AKAEKRKVEY KN+ YNKK EG Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEG 113 >TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2 (HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr1:7177282-7178487 FORWARD Length = 144 Score = 137 bits (344), Expect = 9e-033 Identities = 69/113 (61%), Positives = 78/113 (69%), Gaps = 1/113 (0%) Frame = +1 Query: 133 KGGKSRAAAPKRSDTKLXXXXXXXXXXXXXXXXDPNKPKRPASAFFVFMEEFREKYKKEH 312 KG KS+ + S + DPNKPKRPASAFFVFME+FRE +KKE+ Sbjct: 2 KGAKSKTET-RSSKLSVTKKPAKGAGRGKAAAKDPNKPKRPASAFFVFMEDFRETFKKEN 60 Query: 313 PNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKVEYNKNMDVYNKKQAEG 471 P NKSVA VGKA G+KWKSLSD+EKAPY AKAEKRKVEY KN+ YNKK EG Sbjct: 61 PKNKSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNIKAYNKKLEEG 113 >TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr3:19247241-19248491 REVERSE Length = 179 Score = 122 bits (305), Expect = 3e-028 Identities = 56/82 (68%), Positives = 66/82 (80%) Frame = +1 Query: 232 DPNKPKRPASAFFVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAE 411 DPNKPKR SAFFVF+E+FR +KKE+PN K+V+AVGKAGG+KWKS+S AEKAPY+ KA Sbjct: 49 DPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAA 108 Query: 412 KRKVEYNKNMDVYNKKQAEGDN 477 KRK EY K MD YNK EG + Sbjct: 109 KRKAEYEKQMDAYNKNLEEGSD 130 >TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr3:19247241-19248491 REVERSE Length = 186 Score = 122 bits (305), Expect = 3e-028 Identities = 56/82 (68%), Positives = 66/82 (80%) Frame = +1 Query: 232 DPNKPKRPASAFFVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAE 411 DPNKPKR SAFFVF+E+FR +KKE+PN K+V+AVGKAGG+KWKS+S AEKAPY+ KA Sbjct: 49 DPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAA 108 Query: 412 KRKVEYNKNMDVYNKKQAEGDN 477 KRK EY K MD YNK EG + Sbjct: 109 KRKAEYEKQMDAYNKNLEEGSD 130 >TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP B 1); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr3:19247241-19248491 REVERSE Length = 179 Score = 122 bits (305), Expect = 3e-028 Identities = 56/82 (68%), Positives = 66/82 (80%) Frame = +1 Query: 232 DPNKPKRPASAFFVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAE 411 DPNKPKR SAFFVF+E+FR +KKE+PN K+V+AVGKAGG+KWKS+S AEKAPY+ KA Sbjct: 49 DPNKPKRAPSAFFVFLEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAA 108 Query: 412 KRKVEYNKNMDVYNKKQAEGDN 477 KRK EY K MD YNK EG + Sbjct: 109 KRKAEYEKQMDAYNKNLEEGSD 130 >TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY GROUP B 4); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr2:7642486-7643468 REVERSE Length = 139 Score = 113 bits (282), Expect = 1e-025 Identities = 51/82 (62%), Positives = 64/82 (78%) Frame = +1 Query: 232 DPNKPKRPASAFFVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAE 411 DPN+PKRP SAFFVF+E+FR+++ +PNNKSVA VGKA G +WK+++D +KAPY AKAE Sbjct: 31 DPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAE 90 Query: 412 KRKVEYNKNMDVYNKKQAEGDN 477 RK EY KN+ YN K A G N Sbjct: 91 SRKTEYIKNVQQYNLKLASGTN 112 >TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY GROUP B 4); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr2:7642486-7643468 REVERSE Length = 139 Score = 113 bits (282), Expect = 1e-025 Identities = 51/82 (62%), Positives = 64/82 (78%) Frame = +1 Query: 232 DPNKPKRPASAFFVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAE 411 DPN+PKRP SAFFVF+E+FR+++ +PNNKSVA VGKA G +WK+++D +KAPY AKAE Sbjct: 31 DPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAE 90 Query: 412 KRKVEYNKNMDVYNKKQAEGDN 477 RK EY KN+ YN K A G N Sbjct: 91 SRKTEYIKNVQQYNLKLASGTN 112 >TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY GROUP B 4); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr2:7642486-7643468 REVERSE Length = 135 Score = 113 bits (282), Expect = 1e-025 Identities = 51/82 (62%), Positives = 64/82 (78%) Frame = +1 Query: 232 DPNKPKRPASAFFVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAE 411 DPN+PKRP SAFFVF+E+FR+++ +PNNKSVA VGKA G +WK+++D +KAPY AKAE Sbjct: 31 DPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVATVGKAAGARWKAMTDEDKAPYVAKAE 90 Query: 412 KRKVEYNKNMDVYNKKQAEGDN 477 RK EY KN+ YN K A G N Sbjct: 91 SRKTEYIKNVQQYNLKLASGTN 112 >TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 | HMGB5 (HIGH MOBILITY GROUP B 5); DNA binding / chromatin binding / structural constituent of chromatin / transcription factor | chr4:16887363-16888184 REVERSE Length = 126 Score = 94 bits (231), Expect = 1e-019 Identities = 38/81 (46%), Positives = 61/81 (75%) Frame = +1 Query: 232 DPNKPKRPASAFFVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAE 411 DPN+PK+P S FFVF+++FR+++ +P+NKSV VG+A G+KWK++++ E+AP+ AK++ Sbjct: 30 DPNRPKKPPSPFFVFLDDFRKEFNLANPDNKSVGNVGRAAGKKWKTMTEEERAPFVAKSQ 89 Query: 412 KRKVEYNKNMDVYNKKQAEGD 474 +K EY M YN + A G+ Sbjct: 90 SKKTEYAVTMQQYNMELANGN 110 >TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcription factor | chr5:7888712-7890111 REVERSE Length = 242 Score = 80 bits (195), Expect = 2e-015 Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 1/79 (1%) Frame = +1 Query: 238 NKPKRPASAFFVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKR 417 NKPKRP +AFF+FM +FR+ +K EH N K GGEKWKSL++ EK Y KA + Sbjct: 113 NKPKRPLTAFFIFMSDFRKTFKSEH-NGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAEL 171 Query: 418 KVEYNKNMDVYNKKQAEGD 474 K EYNK+++ + + E D Sbjct: 172 KAEYNKSLESNDADEEEED 190 >TAIR9_protein||AT2G34450.1 | Symbols: | high mobility group (HMG1/2) family protein | chr2:14527918-14529448 REVERSE Length = 152 Score = 75 bits (183), Expect = 4e-014 Identities = 31/76 (40%), Positives = 54/76 (71%) Frame = +1 Query: 244 PKRPASAFFVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAEKRKV 423 PK+PA+AFF F+++FR++Y++E+P+ KS+ +GK GEKWK+++ EK Y A +++ Sbjct: 63 PKKPATAFFFFLDDFRKQYQEENPDVKSMREIGKTCGEKWKTMTYEEKVKYYDIATEKRE 122 Query: 424 EYNKNMDVYNKKQAEG 471 E+++ M Y K+ G Sbjct: 123 EFHRAMTEYTKRMESG 138 >TAIR9_protein||AT4G23800.1 | Symbols: | high mobility group (HMG1/2) family protein | chr4:12390228-12392516 FORWARD Length = 457 Score = 72 bits (174), Expect = 5e-013 Identities = 37/79 (46%), Positives = 49/79 (62%), Gaps = 3/79 (3%) Frame = +1 Query: 232 DPNKPKRPASAFFVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAE 411 DP KPK P SAF V+ E R ++E NKSV V K GE+WK+LSD +KAPY+ A+ Sbjct: 251 DPLKPKHPVSAFLVYANERRAALREE---NKSVVEVAKITGEEWKNLSDKKKAPYEKVAK 307 Query: 412 KRKVEYNKNMDVYNKKQAE 468 K K Y + M+ Y + + E Sbjct: 308 KNKETYLQAMEEYKRTKEE 326 Score = 71 bits (173), Expect = 6e-013 Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 5/80 (6%) Frame = +1 Query: 232 DPNKPKRPASAFFVFMEEFREKYKKEHP--NNKSVAAVGKAGGEKWKSLSDAEKAPYQAK 405 DPNKPK+PAS++F+F ++ R+K +E P NN +V A+ KWK LS+ EK Y K Sbjct: 375 DPNKPKKPASSYFLFSKDERKKLTEERPGTNNATVTALISL---KWKELSEEEKQVYNGK 431 Query: 406 AEKRKVEYNKNMDVYNKKQA 465 A K Y K ++ YNKK A Sbjct: 432 AAKLMEAYKKEVEAYNKKSA 451 >TAIR9_protein||AT2G34450.2 | Symbols: | high mobility group (HMG1/2) family protein | chr2:14527918-14529448 REVERSE Length = 153 Score = 71 bits (172), Expect = 8e-013 Identities = 31/77 (40%), Positives = 54/77 (70%), Gaps = 1/77 (1%) Frame = +1 Query: 244 PKRPASAFFVFMEEFREKYKKEHPNNKSV-AAVGKAGGEKWKSLSDAEKAPYQAKAEKRK 420 PK+PA+AFF F+++FR++Y++E+P+ KS+ +GK GEKWK+++ EK Y A +++ Sbjct: 63 PKKPATAFFFFLDDFRKQYQEENPDVKSMREVIGKTCGEKWKTMTYEEKVKYYDIATEKR 122 Query: 421 VEYNKNMDVYNKKQAEG 471 E+++ M Y K+ G Sbjct: 123 EEFHRAMTEYTKRMESG 139 >TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HMG1/2) family protein | chr4:6760898-6763272 REVERSE Length = 447 Score = 68 bits (165), Expect = 5e-012 Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 3/79 (3%) Frame = +1 Query: 232 DPNKPKRPASAFFVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAE 411 DP KPK+P SA+ ++ E R K E NKSV V K GE+WK+LS+ +KAPY A+ Sbjct: 242 DPLKPKQPISAYLIYANERRAALKGE---NKSVIEVAKMAGEEWKNLSEEKKAPYDQMAK 298 Query: 412 KRKVEYNKNMDVYNKKQAE 468 K K Y + M+ Y + + E Sbjct: 299 KNKEIYLQEMEGYKRTKEE 317 Score = 60 bits (145), Expect = 1e-009 Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 5/77 (6%) Frame = +1 Query: 232 DPNKPKRPASAFFVFMEEFREKYKKEHP--NNKSVAAVGKAGGEKWKSLSDAEKAPYQAK 405 DPNKPK+P S++F+F ++ R+ +EHP NN +V A KW L + EK Y +K Sbjct: 368 DPNKPKKPTSSYFLFCKDARKSVLEEHPGINNSTVTAHISL---KWMELGEEEKQVYNSK 424 Query: 406 AEKRKVEYNKNMDVYNK 456 A + Y K ++ YNK Sbjct: 425 AAELMEAYKKEVEEYNK 441 >TAIR9_protein||AT3G28730.1 | Symbols: ATHMG, SSRP1, NFD | ATHMG (ARABIDOPSIS THALIANA HIGH MOBILITY GROUP); transcription factor | chr3:10784954-10788498 FORWARD Length = 647 Score = 64 bits (154), Expect = 1e-010 Identities = 32/77 (41%), Positives = 42/77 (54%), Gaps = 1/77 (1%) Frame = +1 Query: 232 DPNKPKRPASAFFVFMEEFREKYKKEHPNNKSVAAVGKAGGEKWKSLSDAEKAPYQAKAE 411 DPN PKR S F F + R+ KKEHP + VGK G+KW+ +S +K PY+AKA+ Sbjct: 558 DPNAPKRAMSGFMFFSQMERDNIKKEHP-GIAFGEVGKVLGDKWRQMSADDKEPYEAKAQ 616 Query: 412 KRKVEYNKNMDVYNKKQ 462 K Y + Y Q Sbjct: 617 VDKQRYKDEISDYKNPQ 633 Database: TAIR9 protein Posted date: Wed Jul 08 15:16:08 2009 Number of letters in database: 13,468,323 Number of sequences in database: 33,410 Lambda K H 0.267 0.041 0.140 Gapped Lambda K H 0.267 0.041 0.140 Matrix: blosum62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 4,604,738,094 Number of Sequences: 33410 Number of Extensions: 4604738094 Number of Successful Extensions: 252423256 Number of sequences better than 0.0: 0 |