BLASTX 7.6.2
Query= RU26846 /QuerySize=717
(716 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G54480.1 | Symbols: SKIP5, SKP5 | SKIP5 (SKP1/... 289 2e-078
TAIR9_protein||AT3G54480.2 | Symbols: SKIP5, SKP5 | SKIP5 (SKP1/... 122 3e-028
>TAIR9_protein||AT3G54480.1 | Symbols: SKIP5, SKP5 | SKIP5 (SKP1/ASK-INTERACTING
PROTEIN 5) | chr3:20170883-20173325 REVERSE
Length = 275
Score = 289 bits (737), Expect = 2e-078
Identities = 134/165 (81%), Positives = 150/165 (90%)
Frame = -1
Query: 584 NNLDDGCLMHIFSFLSPIPDRYNTALVCHRWLFLACHPRLWLRVEQSIKDPLEPGVFPSI 405
NNLDDGCLMHI SFLSPIPDRYNTALVCHRW +LACHPRLWLRV++ +KD +PGVF +I
Sbjct: 36 NNLDDGCLMHILSFLSPIPDRYNTALVCHRWRYLACHPRLWLRVDRFVKDLSQPGVFLNI 95
Query: 404 ETAVAAARPGDPILISAGGRHLASDIQIKKPLCLIGGGELPDETTLICSRGADSALEFLS 225
E+AV+AARPGD ILI AGG + S+IQIKKPLCL+GGGE+PDETTL+C+RG+DSALE LS
Sbjct: 96 ESAVSAARPGDTILIVAGGNYRVSNIQIKKPLCLVGGGEIPDETTLVCARGSDSALELLS 155
Query: 224 TCKLANLTVKAEPGCCLLHRSGRLTIDGCVLQCQTNPLDFLSVPI 90
TCKLANLTVKAE GCCLLHRSGRLTIDGCVLQC+TNPLD LS PI
Sbjct: 156 TCKLANLTVKAELGCCLLHRSGRLTIDGCVLQCETNPLDHLSCPI 200
>TAIR9_protein||AT3G54480.2 | Symbols: SKIP5, SKP5 | SKIP5 (SKP1/ASK-INTERACTING
PROTEIN 5) | chr3:20172518-20173325 REVERSE
Length = 119
Score = 122 bits (305), Expect = 3e-028
Identities = 54/68 (79%), Positives = 62/68 (91%)
Frame = -1
Query: 584 NNLDDGCLMHIFSFLSPIPDRYNTALVCHRWLFLACHPRLWLRVEQSIKDPLEPGVFPSI 405
NNLDDGCLMHI SFLSPIPDRYNTALVCHRW +LACHPRLWLRV++ +KD +PGVF +I
Sbjct: 36 NNLDDGCLMHILSFLSPIPDRYNTALVCHRWRYLACHPRLWLRVDRFVKDLSQPGVFLNI 95
Query: 404 ETAVAAAR 381
E+AV+AAR
Sbjct: 96 ESAVSAAR 103
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,604,738,094
Number of Sequences: 33410
Number of Extensions: 4604738094
Number of Successful Extensions: 252423256
Number of sequences better than 0.0: 0
|