BLASTX 7.6.2
Query= RU27086 /QuerySize=663
(662 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G32930.1 | Symbols: ZFN2 | ZFN2 (ZINC FINGER N... 125 3e-029
TAIR9_protein||AT1G04990.2 | Symbols: | zinc finger (CCCH-type)... 124 6e-029
TAIR9_protein||AT1G04990.1 | Symbols: | zinc finger (CCCH-type)... 124 6e-029
TAIR9_protein||AT5G63260.1 | Symbols: | zinc finger (CCCH-type)... 114 6e-026
TAIR9_protein||AT3G02830.1 | Symbols: ZFN1 | ZFN1 (ZINC FINGER P... 110 1e-024
TAIR9_protein||AT3G06410.1 | Symbols: | nucleic acid binding / ... 109 2e-024
TAIR9_protein||AT3G48440.1 | Symbols: | zinc finger (CCCH-type)... 109 3e-024
TAIR9_protein||AT5G16540.3 | Symbols: ZFN3 | ZFN3 (ZINC FINGER N... 109 3e-024
TAIR9_protein||AT5G16540.1 | Symbols: ZFN3 | ZFN3 (ZINC FINGER N... 109 3e-024
TAIR9_protein||AT5G18550.1 | Symbols: | nucleic acid binding / ... 107 7e-024
TAIR9_protein||AT2G47850.1 | Symbols: | zinc finger (CCCH-type)... 104 8e-023
TAIR9_protein||AT2G47850.2 | Symbols: | zinc finger (CCCH-type)... 104 8e-023
TAIR9_protein||AT2G47850.3 | Symbols: | zinc finger (CCCH-type)... 104 8e-023
TAIR9_protein||AT5G16540.2 | Symbols: ZFN3 | ZFN3 (ZINC FINGER N... 98 5e-021
TAIR9_protein||AT1G48195.1 | Symbols: | zinc finger (CCCH-type)... 92 2e-019
TAIR9_protein||AT3G12680.1 | Symbols: HUA1 | HUA1 (ENHANCER OF A... 91 4e-019
>TAIR9_protein||AT2G32930.1 | Symbols: ZFN2 | ZFN2 (ZINC FINGER NUCLEASE 2); DNA
binding / nuclease/ nucleic acid binding | chr2:13965990-13968419
REVERSE
Length = 454
Score = 125 bits (312), Expect = 3e-029
Identities = 70/197 (35%), Positives = 108/197 (54%), Gaps = 9/197 (4%)
Frame = -1
Query: 650 STSILGSNLAYNSRSLGESASNGQVHLSSSPNLPQRPDQPECRYFMNTGTCKYGAECKYH 471
+T + SN YN ++ +S+S+ V ++ + + ++ ECR+FMNTGTCKYG +CKY
Sbjct: 226 ATYMTASNPIYNMKTQLDSSSSASVAVTVTSHHHSFSERAECRFFMNTGTCKYGDDCKYS 285
Query: 470 HPKERIAES---ATNPLGLPSRPGQPLCTNYIMYGICKYGPTCRFDHPFMEHSGNYSFGM 300
HPKER+ +S NP+ LP+RPGQP C N+ YG CK+G C+FDH + + N + G+
Sbjct: 286 HPKERLLQSPPTLLNPIVLPARPGQPACGNFKAYGFCKFGANCKFDHSMLLNPYN-NTGL 344
Query: 299 PMLLDSSPLNYTRNWIAPQGFETSPSISSKFPDVVQKPESEKYQNSETKVPEESP----- 135
M +P Y + PS S KP + + Q+ ET+ ++SP
Sbjct: 345 AMSSLPTPYPYAPPVSTNLRISSPPSPSDMTTLSNGKPAAAEAQSLETEKQDDSPTEPEK 404
Query: 134 ERATGTLPPSPSSSETV 84
+LPP+ S S ++
Sbjct: 405 SEVEDSLPPNGSDSTSL 421
>TAIR9_protein||AT1G04990.2 | Symbols: | zinc finger (CCCH-type) family protein
| chr1:1419368-1421454 REVERSE
Length = 405
Score = 124 bits (310), Expect = 6e-029
Identities = 71/169 (42%), Positives = 96/169 (56%), Gaps = 11/169 (6%)
Frame = -1
Query: 632 SNLAYNSRS----LGESASNGQVHLSSSPNLPQRPDQPECRYFMNTGTCKYGAECKYHHP 465
SN YN ++ G SAS ++ + L + DQPECR+FMNTGTCKYG +CKY HP
Sbjct: 229 SNSMYNVKNQPYYSGSSASMAMA-VALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHP 287
Query: 464 KERIAE---SATNPLGLPSRPGQPLCTNYIMYGICKYGPTCRFDHPFMEHSG-NYSFGMP 297
RI++ S NP LP+RPGQP C N+ YG CK+GP C+FDHP + + G + +P
Sbjct: 288 GVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSLP 347
Query: 296 MLLDSSPLNYTRNWIAPQGFETSPSISSKFPDV-VQKPESEKYQNSETK 153
S + R P + S S+S+ PDV + E+EK N E +
Sbjct: 348 TPFASPVTTHQRISPTPNRSD-SKSLSNGKPDVKKESSETEKPDNGEVQ 395
Score = 93 bits (230), Expect = 1e-019
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = -1
Query: 554 LPQRPDQPECRYFMNTGTCKYGAECKYHHPKERIAESAT--NPLGLPSRPGQPLCTNYIM 381
LP+R QP+C YF+ TG CKYG CKYHHPK+R N +GLP R G+ C Y+
Sbjct: 87 LPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQPVMFNVIGLPMRLGEKPCPYYLR 146
Query: 380 YGICKYGPTCRFDHPFMEHSGNYSFGM 300
G C++G C+F HP ++ + ++GM
Sbjct: 147 TGTCRFGVACKFHHPQPDNGHSTAYGM 173
>TAIR9_protein||AT1G04990.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr1:1419368-1421454 REVERSE
Length = 405
Score = 124 bits (310), Expect = 6e-029
Identities = 71/169 (42%), Positives = 96/169 (56%), Gaps = 11/169 (6%)
Frame = -1
Query: 632 SNLAYNSRS----LGESASNGQVHLSSSPNLPQRPDQPECRYFMNTGTCKYGAECKYHHP 465
SN YN ++ G SAS ++ + L + DQPECR+FMNTGTCKYG +CKY HP
Sbjct: 229 SNSMYNVKNQPYYSGSSASMAMA-VALNRGLSESSDQPECRFFMNTGTCKYGDDCKYSHP 287
Query: 464 KERIAE---SATNPLGLPSRPGQPLCTNYIMYGICKYGPTCRFDHPFMEHSG-NYSFGMP 297
RI++ S NP LP+RPGQP C N+ YG CK+GP C+FDHP + + G + +P
Sbjct: 288 GVRISQPPPSLINPFVLPARPGQPACGNFRSYGFCKFGPNCKFDHPMLPYPGLTMATSLP 347
Query: 296 MLLDSSPLNYTRNWIAPQGFETSPSISSKFPDV-VQKPESEKYQNSETK 153
S + R P + S S+S+ PDV + E+EK N E +
Sbjct: 348 TPFASPVTTHQRISPTPNRSD-SKSLSNGKPDVKKESSETEKPDNGEVQ 395
Score = 93 bits (230), Expect = 1e-019
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Frame = -1
Query: 554 LPQRPDQPECRYFMNTGTCKYGAECKYHHPKERIAESAT--NPLGLPSRPGQPLCTNYIM 381
LP+R QP+C YF+ TG CKYG CKYHHPK+R N +GLP R G+ C Y+
Sbjct: 87 LPERIGQPDCEYFLKTGACKYGPTCKYHHPKDRNGAQPVMFNVIGLPMRLGEKPCPYYLR 146
Query: 380 YGICKYGPTCRFDHPFMEHSGNYSFGM 300
G C++G C+F HP ++ + ++GM
Sbjct: 147 TGTCRFGVACKFHHPQPDNGHSTAYGM 173
>TAIR9_protein||AT5G63260.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr5:25361900-25364453 FORWARD
Length = 436
Score = 114 bits (284), Expect = 6e-026
Identities = 51/96 (53%), Positives = 64/96 (66%), Gaps = 4/96 (4%)
Frame = -1
Query: 614 SRSLGESASNGQV-HLSSSPNLPQRPDQPECRYFMNTGTCKYGAECKYHHPKERIAESAT 438
+ SL E++S Q H S P+RPDQPEC Y++ TG CK+ +CKYHHPK R+ + A
Sbjct: 310 NNSLAETSSFSQYQHQMSVEEFPERPDQPECTYYLKTGDCKFKYKCKYHHPKNRLPKQAA 369
Query: 437 ---NPLGLPSRPGQPLCTNYIMYGICKYGPTCRFDH 339
N GLP RP Q +CT+Y YGICK+GP CRFDH
Sbjct: 370 FSFNDKGLPLRPDQSMCTHYSRYGICKFGPACRFDH 405
>TAIR9_protein||AT3G02830.1 | Symbols: ZFN1 | ZFN1 (ZINC FINGER PROTEIN 1); DNA
binding / nuclease/ nucleic acid binding | chr3:614075-615916 FORWARD
Length = 398
Score = 110 bits (273), Expect = 1e-024
Identities = 51/110 (46%), Positives = 69/110 (62%), Gaps = 7/110 (6%)
Frame = -1
Query: 653 SSTSILGSNLAYNSRSLGESASNGQVHLSSSPNL-PQRPDQPECRYFMNTGTCKYGAECK 477
S + GS YN G S G + N+ P+RP QPEC+++M TG CK+G CK
Sbjct: 240 SGSQSQGSFSGYNP---GSSVPLGGYYALPRENVFPERPGQPECQFYMKTGDCKFGTVCK 296
Query: 476 YHHPKERIA---ESATNPLGLPSRPGQPLCTNYIMYGICKYGPTCRFDHP 336
+HHP++R A + + +GLP RPG+PLC Y YGICK+GP+C+FDHP
Sbjct: 297 FHHPRDRQAPPPDCLLSSIGLPLRPGEPLCVFYTRYGICKFGPSCKFDHP 346
Score = 82 bits (202), Expect = 2e-016
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Frame = -1
Query: 551 PQRPDQPECRYFMNTGTCKYGAECKYHHPKER---IAESATNPLGLPSRPGQPLCTNYIM 381
P+R QPEC Y++ TGTCK+G CK+HHP+ + + N LG P R + C ++
Sbjct: 83 PERIGQPECEYYLKTGTCKFGVTCKFHHPRNKAGIAGRVSLNMLGYPLRSNEVDCAYFLR 142
Query: 380 YGICKYGPTCRFDHP 336
G CK+G TC+F+HP
Sbjct: 143 TGHCKFGGTCKFNHP 157
>TAIR9_protein||AT3G06410.1 | Symbols: | nucleic acid binding / zinc ion
binding | chr3:1947471-1949528 REVERSE
Length = 463
Score = 109 bits (271), Expect = 2e-024
Identities = 57/133 (42%), Positives = 75/133 (56%), Gaps = 15/133 (11%)
Frame = -1
Query: 656 VSSTSILG------SNLAYNSRSLGESASNGQVHLSSSPNLPQRPDQPECRYFMNTGTCK 495
+ S+SI G S AY +SN S+S PQRPDQPEC+YFM TG CK
Sbjct: 269 IGSSSIYGLTPLSPSATAYTGTYQSVPSSN-----STSKEFPQRPDQPECQYFMRTGDCK 323
Query: 494 YGAECKYHHPKERIAES---ATNPLGLPSRPGQPLCTNYIMYGICKYGPTCRFDHPFMEH 324
+G+ C+YHHP + + + +GLP RPG CT++ +GICK+GP C+FDH M
Sbjct: 324 FGSSCRYHHPVDAVPPKTGIVLSSIGLPLRPGVAQCTHFAQHGICKFGPACKFDHS-MSS 382
Query: 323 SGNYSFGMPMLLD 285
S +YS L D
Sbjct: 383 SLSYSPSASSLTD 395
Score = 92 bits (227), Expect = 2e-019
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 5/78 (6%)
Frame = -1
Query: 554 LPQRPDQPECRYFMNTGTCKYGAECKYHHPKE-----RIAESATNPLGLPSRPGQPLCTN 390
LP+R P C++FM TGTCK+GA CKYHHP++ +A + + LG P RPG+ C+
Sbjct: 97 LPERMGHPVCQHFMRTGTCKFGASCKYHHPRQGGGGGSVAPVSLSYLGYPLRPGEKECSY 156
Query: 389 YIMYGICKYGPTCRFDHP 336
Y+ G CK+G TCRF+HP
Sbjct: 157 YLRTGQCKFGLTCRFNHP 174
>TAIR9_protein||AT3G48440.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr3:17941402-17943576 FORWARD
Length = 449
Score = 109 bits (270), Expect = 3e-024
Identities = 51/108 (47%), Positives = 65/108 (60%), Gaps = 8/108 (7%)
Frame = -1
Query: 653 SSTSILGSNLAYNSRSLGESASNGQVHLSSSPNLPQRPDQPECRYFMNTGTCKYGAECKY 474
S+T ++ ++ A S L + H + P+RPDQPEC Y+M TG CK+ CKY
Sbjct: 315 STTYLMNNSSAETSMLLSQYR-----HQMPAEEFPERPDQPECSYYMKTGDCKFKFNCKY 369
Query: 473 HHPKERIAE---SATNPLGLPSRPGQPLCTNYIMYGICKYGPTCRFDH 339
HHPK R+ + A N GLP RP Q +CT Y YGICK+GP CRFDH
Sbjct: 370 HHPKNRLPKLPPYALNDKGLPLRPDQNICTYYSRYGICKFGPACRFDH 417
Score = 52 bits (124), Expect = 2e-007
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 5/41 (12%)
Frame = -1
Query: 572 LSSSP-----NLPQRPDQPECRYFMNTGTCKYGAECKYHHP 465
L+S+P LP RP + EC Y+M G+CKYGAECK++HP
Sbjct: 190 LASAPELNFLGLPLRPGEVECPYYMRNGSCKYGAECKFNHP 230
>TAIR9_protein||AT5G16540.3 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding | chr5:5403598-5405034
FORWARD
Length = 355
Score = 109 bits (270), Expect = 3e-024
Identities = 47/105 (44%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Frame = -1
Query: 602 GESASNGQVHLSSSPNLPQRPDQPECRYFMNTGTCKYGAECKYHHPKERIA---ESATNP 432
G S G L P+RP QPEC+++M TG CK+G CK+HHP++R + +
Sbjct: 203 GNSVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSS 262
Query: 431 LGLPSRPGQPLCTNYIMYGICKYGPTCRFDHPFMEHSGNYSFGMP 297
+GLP RPG+PLC Y YGICK+GP+C+FDHP + N + P
Sbjct: 263 VGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASP 307
Score = 83 bits (204), Expect = 1e-016
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Frame = -1
Query: 551 PQRPDQPECRYFMNTGTCKYGAECKYHHPKERI---AESATNPLGLPSRPGQPLCTNYIM 381
P+R QPEC +++ TGTCK+G CK+HHP+ + + N L P RP + C+ ++
Sbjct: 64 PERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLR 123
Query: 380 YGICKYGPTCRFDHP 336
G CK+G TC+F+HP
Sbjct: 124 IGQCKFGGTCKFNHP 138
>TAIR9_protein||AT5G16540.1 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding | chr5:5403437-5405034
FORWARD
Length = 376
Score = 109 bits (270), Expect = 3e-024
Identities = 47/105 (44%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Frame = -1
Query: 602 GESASNGQVHLSSSPNLPQRPDQPECRYFMNTGTCKYGAECKYHHPKERIA---ESATNP 432
G S G L P+RP QPEC+++M TG CK+G CK+HHP++R + +
Sbjct: 224 GNSVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDRQTPPPDCVLSS 283
Query: 431 LGLPSRPGQPLCTNYIMYGICKYGPTCRFDHPFMEHSGNYSFGMP 297
+GLP RPG+PLC Y YGICK+GP+C+FDHP + N + P
Sbjct: 284 VGLPLRPGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASP 328
Score = 83 bits (204), Expect = 1e-016
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Frame = -1
Query: 551 PQRPDQPECRYFMNTGTCKYGAECKYHHPKERI---AESATNPLGLPSRPGQPLCTNYIM 381
P+R QPEC +++ TGTCK+G CK+HHP+ + + N L P RP + C+ ++
Sbjct: 85 PERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLR 144
Query: 380 YGICKYGPTCRFDHP 336
G CK+G TC+F+HP
Sbjct: 145 IGQCKFGGTCKFNHP 159
>TAIR9_protein||AT5G18550.1 | Symbols: | nucleic acid binding / zinc ion
binding | chr5:6160515-6162729 FORWARD
Length = 466
Score = 107 bits (266), Expect = 7e-024
Identities = 53/126 (42%), Positives = 72/126 (57%), Gaps = 8/126 (6%)
Frame = -1
Query: 638 LGSNLAYNSRSLGESASNGQVHLSSS------PNLPQRPDQPECRYFMNTGTCKYGAECK 477
+G++ Y L SA Q SS+ PQRP+QPEC+YFM TG CK+G C+
Sbjct: 263 MGTSSVYGITPLSPSAPAYQSGPSSTGVSNKEQTFPQRPEQPECQYFMRTGDCKFGTSCR 322
Query: 476 YHHPKERIAESAT--NPLGLPSRPGQPLCTNYIMYGICKYGPTCRFDHPFMEHSGNYSFG 303
+HHP E + A+ + +GLP RPG CT++ +GICK+GP C+FDH S +YS
Sbjct: 323 FHHPMEAASPEASTLSHIGLPLRPGAVPCTHFAQHGICKFGPACKFDHSLGSSSLSYSPS 382
Query: 302 MPMLLD 285
L D
Sbjct: 383 PSSLTD 388
Score = 89 bits (220), Expect = 2e-018
Identities = 36/77 (46%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
Frame = -1
Query: 551 PQRPDQPECRYFMNTGTCKYGAECKYHHPK-----ERIAESATNPLGLPSRPGQPLCTNY 387
P+R QP C++FM TGTCK+GA CKYHHP+ + + + N +G P RPG+ C+ +
Sbjct: 95 PERMGQPVCQHFMRTGTCKFGASCKYHHPRQGGGGDSVTPVSLNYMGFPLRPGEKECSYF 154
Query: 386 IMYGICKYGPTCRFDHP 336
+ G CK+G TCR+ HP
Sbjct: 155 MRTGQCKFGSTCRYHHP 171
>TAIR9_protein||AT2G47850.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:19595953-19598119 FORWARD
Length = 469
Score = 104 bits (257), Expect = 8e-023
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Frame = -1
Query: 551 PQRPDQPECRYFMNTGTCKYGAECKYHHPKERI---AESATNPLGLPSRPGQPLCTNYIM 381
P+RP +PEC+Y++ TG CK+G CK+HHP++R+ A +P+GLP RPG CT Y+
Sbjct: 287 PERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQ 346
Query: 380 YGICKYGPTCRFDHP 336
G CK+G TC+FDHP
Sbjct: 347 NGFCKFGSTCKFDHP 361
Score = 81 bits (198), Expect = 6e-016
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Frame = -1
Query: 551 PQRPDQPECRYFMNTGTCKYGAECKYHHPKERIAESATNPL---GLPSRPGQPLCTNYIM 381
P+R +P C++++ TGTCK+GA CK+HHPK + PL G P R G C+ Y+
Sbjct: 88 PERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYLK 147
Query: 380 YGICKYGPTCRFDHP 336
G CK+G TC+F HP
Sbjct: 148 TGQCKFGITCKFHHP 162
>TAIR9_protein||AT2G47850.2 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:19595953-19598119 FORWARD
Length = 443
Score = 104 bits (257), Expect = 8e-023
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Frame = -1
Query: 551 PQRPDQPECRYFMNTGTCKYGAECKYHHPKERI---AESATNPLGLPSRPGQPLCTNYIM 381
P+RP +PEC+Y++ TG CK+G CK+HHP++R+ A +P+GLP RPG CT Y+
Sbjct: 261 PERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQ 320
Query: 380 YGICKYGPTCRFDHP 336
G CK+G TC+FDHP
Sbjct: 321 NGFCKFGSTCKFDHP 335
Score = 54 bits (128), Expect = 7e-008
Identities = 20/47 (42%), Positives = 30/47 (63%)
Frame = -1
Query: 551 PQRPDQPECRYFMNTGTCKYGAECKYHHPKERIAESATNPLGLPSRP 411
P+R +P C++++ TGTCK+GA CK+HHPK + PL + P
Sbjct: 88 PERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYP 134
>TAIR9_protein||AT2G47850.3 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:19595953-19598119 FORWARD
Length = 469
Score = 104 bits (257), Expect = 8e-023
Identities = 39/75 (52%), Positives = 54/75 (72%), Gaps = 3/75 (4%)
Frame = -1
Query: 551 PQRPDQPECRYFMNTGTCKYGAECKYHHPKERI---AESATNPLGLPSRPGQPLCTNYIM 381
P+RP +PEC+Y++ TG CK+G CK+HHP++R+ A +P+GLP RPG CT Y+
Sbjct: 287 PERPGEPECQYYLKTGDCKFGTSCKFHHPRDRVPPRANCVLSPIGLPLRPGVQRCTFYVQ 346
Query: 380 YGICKYGPTCRFDHP 336
G CK+G TC+FDHP
Sbjct: 347 NGFCKFGSTCKFDHP 361
Score = 81 bits (198), Expect = 6e-016
Identities = 34/75 (45%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Frame = -1
Query: 551 PQRPDQPECRYFMNTGTCKYGAECKYHHPKERIAESATNPL---GLPSRPGQPLCTNYIM 381
P+R +P C++++ TGTCK+GA CK+HHPK + PL G P R G C+ Y+
Sbjct: 88 PERFGEPPCQFYLKTGTCKFGASCKFHHPKNAGGSMSHVPLNIYGYPVREGDNECSYYLK 147
Query: 380 YGICKYGPTCRFDHP 336
G CK+G TC+F HP
Sbjct: 148 TGQCKFGITCKFHHP 162
>TAIR9_protein||AT5G16540.2 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding | chr5:5403437-5405034
FORWARD
Length = 369
Score = 98 bits (242), Expect = 5e-021
Identities = 44/102 (43%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Frame = -1
Query: 602 GESASNGQVHLSSSPNLPQRPDQPECRYFMNTGTCKYGAECKYHHPKERIAESATNPLGL 423
G S G L P+RP QPEC+++M TG CK+G CK+HHP++R T P
Sbjct: 224 GNSVPLGFYALPRENVFPERPGQPECQFYMKTGDCKFGTVCKFHHPRDR----QTPPPDC 279
Query: 422 PSRPGQPLCTNYIMYGICKYGPTCRFDHPFMEHSGNYSFGMP 297
G+PLC Y YGICK+GP+C+FDHP + N + P
Sbjct: 280 VLSSGEPLCVFYSRYGICKFGPSCKFDHPMRVFTYNNNTASP 321
Score = 83 bits (204), Expect = 1e-016
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Frame = -1
Query: 551 PQRPDQPECRYFMNTGTCKYGAECKYHHPKERI---AESATNPLGLPSRPGQPLCTNYIM 381
P+R QPEC +++ TGTCK+G CK+HHP+ + + N L P RP + C+ ++
Sbjct: 85 PERIGQPECEFYLKTGTCKFGVTCKFHHPRNKAGIDGSVSVNVLSYPLRPNEDDCSYFLR 144
Query: 380 YGICKYGPTCRFDHP 336
G CK+G TC+F+HP
Sbjct: 145 IGQCKFGGTCKFNHP 159
>TAIR9_protein||AT1G48195.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr1:17796349-17796597 FORWARD
Length = 83
Score = 92 bits (227), Expect = 2e-019
Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 3/79 (3%)
Frame = -1
Query: 566 SSPNLPQRPDQPECRYFMNTGTCKYGAECKYHHPKE---RIAESATNPLGLPSRPGQPLC 396
S P+RP +PEC Y++ TG C CKYHHPK + N GLP RPGQ +C
Sbjct: 2 SEEKFPERPGEPECSYYLRTGNCYLKQNCKYHHPKNITPSEPQCTLNDKGLPLRPGQAIC 61
Query: 395 TNYIMYGICKYGPTCRFDH 339
+Y +GIC+ GPTC+FDH
Sbjct: 62 PHYSRFGICRSGPTCKFDH 80
>TAIR9_protein||AT3G12680.1 | Symbols: HUA1 | HUA1 (ENHANCER OF AG-4 1); RNA
binding | chr3:4025276-4028999 REVERSE
Length = 525
Score = 91 bits (225), Expect = 4e-019
Identities = 39/94 (41%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Frame = -1
Query: 551 PQRPDQPECRYFMNTGTCKYGAECKYHHPKERIAESATNPLGLPSRPGQPLCTNYIMYGI 372
P+RP +P+C Y++ T CKYG++CK++HP+E A S LP RP +P+CT Y+ G
Sbjct: 223 PERPGEPDCPYYIKTQRCKYGSKCKFNHPREEAAVSVETQDSLPERPSEPMCTFYMKTGK 282
Query: 371 CKYGPTCRFDHP--FMEHSGNYSFGMPMLLDSSP 276
CK+G +C+F HP S + G + L S P
Sbjct: 283 CKFGLSCKFHHPKDIQLPSSSQDIGSSVGLTSEP 316
Score = 59 bits (140), Expect = 3e-009
Identities = 21/51 (41%), Positives = 34/51 (66%)
Frame = -1
Query: 578 VHLSSSPNLPQRPDQPECRYFMNTGTCKYGAECKYHHPKERIAESATNPLG 426
V + + +LP+RP +P C ++M TG CK+G CK+HHPK+ S++ +G
Sbjct: 257 VSVETQDSLPERPSEPMCTFYMKTGKCKFGLSCKFHHPKDIQLPSSSQDIG 307
Score = 57 bits (137), Expect = 7e-009
Identities = 21/38 (55%), Positives = 27/38 (71%)
Frame = -1
Query: 563 SPNLPQRPDQPECRYFMNTGTCKYGAECKYHHPKERIA 450
S PQRP Q EC Y+M TG CK+G CK+HHP +R++
Sbjct: 414 SATYPQRPGQSECDYYMKTGECKFGERCKFHHPADRLS 451
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,633,441,353
Number of Sequences: 33410
Number of Extensions: 4633441353
Number of Successful Extensions: 252771347
Number of sequences better than 0.0: 0
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