BLASTX 7.6.2
Query= RU27382 /QuerySize=717
(716 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G34670.1 | Symbols: | 40S ribosomal protein S... 271 3e-073
TAIR9_protein||AT3G04840.1 | Symbols: | 40S ribosomal protein S... 267 5e-072
>TAIR9_protein||AT4G34670.1 | Symbols: | 40S ribosomal protein S3A (RPS3aB) |
chr4:16548724-16550222 FORWARD
Length = 263
Score = 271 bits (692), Expect = 3e-073
Identities = 137/167 (82%), Positives = 146/167 (87%)
Frame = +2
Query: 206 KPSFTRTQGTKIASEGLKHRVFEISLADLQKDEDHAYRKIRLRAEDVQGKDVLTNFWGID 385
K +RTQGTKIASEGLKHRVFE+SLADLQ DED+AYRKIRLRAEDVQG++VLT FWG+D
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEVSLADLQNDEDNAYRKIRLRAEDVQGRNVLTQFWGMD 104
Query: 386 FATDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQI 565
F TDKLRSLV+KWQTLIEAHVDVKTTD YTLRMFCIAFTKRRANQVKRTCYAQSSQIRQI
Sbjct: 105 FTTDKLRSLVKKWQTLIEAHVDVKTTDGYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQI 164
Query: 566 RRKMREIMVNQASACDLKELVQKFIPEMIGREIGKGYIQHLPTGRVF 706
RRKM EIMV +AS+CDLKELV KFIPE IGREI K P VF
Sbjct: 165 RRKMSEIMVKEASSCDLKELVAKFIPEAIGREIEKATQGIYPLQNVF 211
>TAIR9_protein||AT3G04840.1 | Symbols: | 40S ribosomal protein S3A (RPS3aA) |
chr3:1329751-1331418 FORWARD
Length = 263
Score = 267 bits (682), Expect = 5e-072
Identities = 134/167 (80%), Positives = 147/167 (88%)
Frame = +2
Query: 206 KPSFTRTQGTKIASEGLKHRVFEISLADLQKDEDHAYRKIRLRAEDVQGKDVLTNFWGID 385
K +RTQGTKIASEGLKHRVFE+SLADLQ DED+AYRKIRLRAEDVQG++VL FWG+D
Sbjct: 45 KTLVSRTQGTKIASEGLKHRVFEVSLADLQGDEDNAYRKIRLRAEDVQGRNVLCQFWGMD 104
Query: 386 FATDKLRSLVRKWQTLIEAHVDVKTTDNYTLRMFCIAFTKRRANQVKRTCYAQSSQIRQI 565
F TDKLRSLV+KWQTLIEAHVDVKTTD+YTLR+FCIAFTKRRANQVKRTCYAQSSQIRQI
Sbjct: 105 FTTDKLRSLVKKWQTLIEAHVDVKTTDSYTLRLFCIAFTKRRANQVKRTCYAQSSQIRQI 164
Query: 566 RRKMREIMVNQASACDLKELVQKFIPEMIGREIGKGYIQHLPTGRVF 706
RRKMR+IMV +AS+CDLK+LV KFIPE IGREI K P VF
Sbjct: 165 RRKMRDIMVREASSCDLKDLVAKFIPEAIGREIEKATQGIYPLQNVF 211
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,661,322,135
Number of Sequences: 33410
Number of Extensions: 4661322135
Number of Successful Extensions: 252909199
Number of sequences better than 0.0: 0
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