BLASTX 7.6.2
Query= RU27413 /QuerySize=500
(499 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G19860.2 | Symbols: | basic helix-loop-helix ... 114 4e-026
TAIR9_protein||AT3G19860.1 | Symbols: | basic helix-loop-helix ... 114 5e-026
TAIR9_protein||AT4G36060.1 | Symbols: | basic helix-loop-helix ... 96 1e-020
TAIR9_protein||AT4G36060.2 | Symbols: | basic helix-loop-helix ... 92 2e-019
TAIR9_protein||AT5G54680.1 | Symbols: ILR3 | ILR3 (iaa-leucine r... 65 2e-011
TAIR9_protein||AT3G23210.1 | Symbols: | basic helix-loop-helix ... 59 1e-009
TAIR9_protein||AT1G51070.1 | Symbols: | basic helix-loop-helix ... 55 3e-008
>TAIR9_protein||AT3G19860.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:6903842-6905863 FORWARD
Length = 338
Score = 114 bits (284), Expect = 4e-026
Identities = 57/78 (73%), Positives = 68/78 (87%), Gaps = 1/78 (1%)
Frame = +2
Query: 266 ADLETKDPVSARKVQKADREKLRRDRLNEHFLDLGNTLDPDRPKNDKATILTDTIQMLKD 445
A+ E D VSARK QKA REKLRR++LNEHF++LGN LDP+RPKNDKATILTDT+Q+LK+
Sbjct: 49 AEEEVMD-VSARKSQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTVQLLKE 107
Query: 446 LTSDVNKLKAECAALNDE 499
LTS+VNKLK+E AL DE
Sbjct: 108 LTSEVNKLKSEYTALTDE 125
>TAIR9_protein||AT3G19860.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:6904579-6905863 FORWARD
Length = 285
Score = 114 bits (283), Expect = 5e-026
Identities = 54/70 (77%), Positives = 64/70 (91%)
Frame = +2
Query: 290 VSARKVQKADREKLRRDRLNEHFLDLGNTLDPDRPKNDKATILTDTIQMLKDLTSDVNKL 469
VSARK QKA REKLRR++LNEHF++LGN LDP+RPKNDKATILTDT+Q+LK+LTS+VNKL
Sbjct: 3 VSARKSQKAGREKLRREKLNEHFVELGNVLDPERPKNDKATILTDTVQLLKELTSEVNKL 62
Query: 470 KAECAALNDE 499
K+E AL DE
Sbjct: 63 KSEYTALTDE 72
>TAIR9_protein||AT4G36060.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:17055397-17056567 FORWARD
Length = 287
Score = 96 bits (236), Expect = 1e-020
Identities = 52/99 (52%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Frame = +2
Query: 203 DFAGVSAPSSSQPLACDSRKRADLETKDPVSARKVQKADREKLRRDRLNEHFLDLGNTLD 382
DFA S+ SSS + + + A++ + A QKA+REKLRRD+L E FL+LGN LD
Sbjct: 14 DFADDSSASSSSS-SGQNLRGAEMVVEVKKEAVCSQKAEREKLRRDKLKEQFLELGNALD 72
Query: 383 PDRPKNDKATILTDTIQMLKDLTSDVNKLKAECAALNDE 499
P+RPK+DKA++LTDTIQMLKD+ + V++LKAE L+ E
Sbjct: 73 PNRPKSDKASVLTDTIQMLKDVMNQVDRLKAEYETLSQE 111
>TAIR9_protein||AT4G36060.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:17055521-17056567 FORWARD
Length = 269
Score = 92 bits (227), Expect = 2e-019
Identities = 43/64 (67%), Positives = 55/64 (85%)
Frame = +2
Query: 308 QKADREKLRRDRLNEHFLDLGNTLDPDRPKNDKATILTDTIQMLKDLTSDVNKLKAECAA 487
QKA+REKLRRD+L E FL+LGN LDP+RPK+DKA++LTDTIQMLKD+ + V++LKAE
Sbjct: 30 QKAEREKLRRDKLKEQFLELGNALDPNRPKSDKASVLTDTIQMLKDVMNQVDRLKAEYET 89
Query: 488 LNDE 499
L+ E
Sbjct: 90 LSQE 93
>TAIR9_protein||AT5G54680.1 | Symbols: ILR3 | ILR3 (iaa-leucine resistant3); DNA
binding / transcription factor | chr5:22217270-22218993 FORWARD
Length = 235
Score = 65 bits (157), Expect = 2e-011
Identities = 40/102 (39%), Positives = 60/102 (58%), Gaps = 8/102 (7%)
Frame = +2
Query: 197 GDDFAGVSAPSSSQPLACDSRKRADLETKDPVSARKVQKADREKLRRDRLNEHFLDLGNT 376
G D + ++ +S +P S+KR E+ S+ KA REK RRDRLN+ F++LG
Sbjct: 45 GVDGSAGNSEASKEP---GSKKRGRCESSSATSS----KACREKQRRDRLNDKFMELGAI 97
Query: 377 LDP-DRPKNDKATILTDTIQMLKDLTSDVNKLKAECAALNDE 499
L+P + PK DKA IL D ++M+ L + KLK ++L D+
Sbjct: 98 LEPGNPPKTDKAAILVDAVRMVTQLRGEAQKLKDSNSSLQDK 139
>TAIR9_protein||AT3G23210.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:8283255-8284915 REVERSE
Length = 321
Score = 59 bits (142), Expect = 1e-009
Identities = 40/128 (31%), Positives = 65/128 (50%), Gaps = 15/128 (11%)
Frame = +2
Query: 146 FAEQTLEYQIEAMDQWKGDDFAGVSAPSSSQPLA---------CDSRKRADLETKDPVSA 298
F Q + + + Q +G F+GV +SS + C ++R P +
Sbjct: 108 FRGQNDDSAVPHLQQQQGQVFSGVVEINSSSSVGAVKEEFEEECSGKRRRTGSCSKPGT- 166
Query: 299 RKVQKADREKLRRDRLNEHFLDLGNTLDPDR-PKNDKATILTDTIQMLKDLTSDVNKLKA 475
KA REKLRR++LN+ F+DL + L+P R PK DK+ IL D I+++ L + ++L+
Sbjct: 167 ----KACREKLRREKLNDKFMDLSSVLEPGRTPKTDKSAILDDAIRVVNQLRGEAHELQE 222
Query: 476 ECAALNDE 499
L +E
Sbjct: 223 TNQKLLEE 230
>TAIR9_protein||AT1G51070.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:18928018-18929513 FORWARD
Length = 227
Score = 55 bits (130), Expect = 3e-008
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 5/83 (6%)
Frame = +2
Query: 254 SRKRADLETKDPVSARKVQKADREKLRRDRLNEHFLDLGNTLDPDR-PKNDKATILTDTI 430
SRKR E+ KA REK RRDRLN+ F +L + L+P R PK DK I+ D I
Sbjct: 56 SRKRIKTES----CTGSNSKACREKQRRDRLNDKFTELSSVLEPGRTPKTDKVAIINDAI 111
Query: 431 QMLKDLTSDVNKLKAECAALNDE 499
+M+ + KLK ++L ++
Sbjct: 112 RMVNQARDEAQKLKDLNSSLQEK 134
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,661,322,135
Number of Sequences: 33410
Number of Extensions: 4661322135
Number of Successful Extensions: 252909199
Number of sequences better than 0.0: 0
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