BLASTX 7.6.2
Query= RU27456 /QuerySize=457
(456 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G46460.1 | Symbols: UBC13 | UBC13 (ubiquitin-c... 198 2e-051
TAIR9_protein||AT3G55380.1 | Symbols: UBC14 | UBC14 (ubiquitin-c... 192 1e-049
TAIR9_protein||AT5G59300.1 | Symbols: UBC7, ATUBC7 | UBC7 (UBIQU... 169 8e-043
TAIR9_protein||AT1G14400.1 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQU... 86 9e-018
TAIR9_protein||AT1G14400.2 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQU... 86 9e-018
TAIR9_protein||AT2G02760.1 | Symbols: ATUBC2, UBC2 | ATUBC2 (UBI... 86 9e-018
TAIR9_protein||AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-con... 86 1e-017
TAIR9_protein||AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugat... 77 5e-015
TAIR9_protein||AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugat... 77 5e-015
TAIR9_protein||AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugat... 74 3e-014
TAIR9_protein||AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugat... 72 1e-013
TAIR9_protein||AT5G25760.1 | Symbols: PEX4, UBC21 | PEX4 (PEROXI... 72 1e-013
TAIR9_protein||AT5G25760.2 | Symbols: PEX4 | PEX4 (PEROXIN4); pr... 72 1e-013
TAIR9_protein||AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1... 67 3e-012
TAIR9_protein||AT1G50490.1 | Symbols: UBC20 | UBC20 (ubiquitin-c... 64 3e-011
TAIR9_protein||AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 ... 61 3e-010
TAIR9_protein||AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 ... 61 3e-010
TAIR9_protein||AT3G20060.1 | Symbols: UBC19 | UBC19 (ubiquitin-c... 60 5e-010
TAIR9_protein||AT3G20060.2 | Symbols: UBC19 | UBC19 (ubiquitin-c... 60 5e-010
TAIR9_protein||AT5G50870.1 | Symbols: UBC27 | UBC27 (ubiquitin-c... 58 3e-009
TAIR9_protein||AT5G05080.1 | Symbols: UBC22 | UBC22 (ubiquitin-c... 55 2e-008
TAIR9_protein||AT5G05080.2 | Symbols: UBC22 | UBC22 (ubiquitin-c... 55 2e-008
TAIR9_protein||AT2G46030.1 | Symbols: UBC6 | UBC6 (ubiquitin-con... 53 6e-008
TAIR9_protein||AT3G17000.1 | Symbols: UBC32 | UBC32 (ubiquitin-c... 52 1e-007
TAIR9_protein||AT1G63800.1 | Symbols: UBC5 | UBC5 (ubiquitin-con... 51 3e-007
TAIR9_protein||AT5G41340.1 | Symbols: UBC4, ATUBC4 | UBC4 (UBIQU... 51 3e-007
TAIR9_protein||AT1G23260.1 | Symbols: MMZ1, UEV1A | MMZ1 (MMS ZW... 49 1e-006
TAIR9_protein||AT2G16920.1 | Symbols: UBC23, PFU2 | UBC23 (UBIQU... 49 1e-006
TAIR9_protein||AT1G70660.1 | Symbols: MMZ2, UEV1B | MMZ2 (MMS ZW... 47 5e-006
>TAIR9_protein||AT3G46460.1 | Symbols: UBC13 | UBC13 (ubiquitin-conjugating
enzyme 13); ubiquitin-protein ligase | chr3:17096120-17097315 REVERSE
Length = 167
Score = 198 bits (502), Expect = 2e-051
Identities = 85/98 (86%), Positives = 93/98 (94%)
Frame = +3
Query: 162 CKHPVDGFSAGLIDEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSE 341
CKHPVDGFSAGL+DE NIFEW+VTIIGPPDTLY+GGFF AIMSFP +YPN+PPTVRFTS+
Sbjct: 17 CKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSPPTVRFTSD 76
Query: 342 IWHPNVYSDGKVCISILHPPGDDPNGYELASERWNPVH 455
IWHPNVY DG+VCISILHPPGDDP+GYELASERW PVH
Sbjct: 77 IWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVH 114
>TAIR9_protein||AT3G55380.1 | Symbols: UBC14 | UBC14 (ubiquitin-conjugating
enzyme 14); ubiquitin-protein ligase | chr3:20531520-20532895 FORWARD
Length = 168
Score = 192 bits (486), Expect = 1e-049
Identities = 84/111 (75%), Positives = 95/111 (85%)
Frame = +3
Query: 123 QASXXXXXXXXXXCKHPVDGFSAGLIDEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPND 302
QAS CK PVDGFSAGL+DE N+F+W+V+I+GPPDTLY+GGFFNAIMSFP +
Sbjct: 5 QASLLLQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFPEN 64
Query: 303 YPNNPPTVRFTSEIWHPNVYSDGKVCISILHPPGDDPNGYELASERWNPVH 455
YP +PPTV FTSE+WHPNVYSDGKVCISILHPPGDDP+GYELASERW PVH
Sbjct: 65 YPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVH 115
>TAIR9_protein||AT5G59300.1 | Symbols: UBC7, ATUBC7 | UBC7 (UBIQUITIN CARRIER
PROTEIN 7); protein binding / ubiquitin-protein ligase |
chr5:23919868-23921291 REVERSE
Length = 199
Score = 169 bits (427), Expect = 8e-043
Identities = 71/82 (86%), Positives = 80/82 (97%)
Frame = +3
Query: 210 NIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNVYSDGKVCISI 389
NIFEW+VTIIGPPDTLY+GGFFNAIM+FP +YPN+PPTVRFTS++WHPNVYSDG+VCISI
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 390 LHPPGDDPNGYELASERWNPVH 455
LHPPGDDP+GYELASERW PVH
Sbjct: 125 LHPPGDDPSGYELASERWTPVH 146
>TAIR9_protein||AT1G14400.1 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER
PROTEIN 1); ubiquitin-protein ligase | chr1:4927294-4928136 REVERSE
Length = 153
Score = 86 bits (211), Expect = 9e-018
Identities = 35/68 (51%), Positives = 45/68 (66%)
Frame = +3
Query: 189 AGLIDEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNVYSD 368
+G + NI WN I GP DT +DGG F + F DYPN PPTVRF S ++HPN+Y+D
Sbjct: 25 SGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYAD 84
Query: 369 GKVCISIL 392
G +C+ IL
Sbjct: 85 GSICLDIL 92
>TAIR9_protein||AT1G14400.2 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER
PROTEIN 1); ubiquitin-protein ligase | chr1:4927294-4928136 REVERSE
Length = 153
Score = 86 bits (211), Expect = 9e-018
Identities = 35/68 (51%), Positives = 45/68 (66%)
Frame = +3
Query: 189 AGLIDEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNVYSD 368
+G + NI WN I GP DT +DGG F + F DYPN PPTVRF S ++HPN+Y+D
Sbjct: 25 SGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYAD 84
Query: 369 GKVCISIL 392
G +C+ IL
Sbjct: 85 GSICLDIL 92
>TAIR9_protein||AT2G02760.1 | Symbols: ATUBC2, UBC2 | ATUBC2
(UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein ligase |
chr2:774271-775149 FORWARD
Length = 153
Score = 86 bits (211), Expect = 9e-018
Identities = 35/68 (51%), Positives = 45/68 (66%)
Frame = +3
Query: 189 AGLIDEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNVYSD 368
+G + NI WN I GP DT +DGG F + F DYPN PPTVRF S ++HPN+Y+D
Sbjct: 25 SGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYAD 84
Query: 369 GKVCISIL 392
G +C+ IL
Sbjct: 85 GSICLDIL 92
>TAIR9_protein||AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-conjugating enzyme
3); ubiquitin-protein ligase | chr5:25104679-25105465 FORWARD
Length = 151
Score = 86 bits (210), Expect = 1e-017
Identities = 38/76 (50%), Positives = 47/76 (61%), Gaps = 1/76 (1%)
Frame = +3
Query: 165 KHPVDGFSAGLIDEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEI 344
K P G S G + NI WN I GP DT +DGG F + F DYPN PP VRF S +
Sbjct: 18 KDPPVGIS-GAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNKPPIVRFVSRM 76
Query: 345 WHPNVYSDGKVCISIL 392
+HPN+Y+DG +C+ IL
Sbjct: 77 FHPNIYADGSICLDIL 92
>TAIR9_protein||AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 149
Score = 77 bits (187), Expect = 5e-015
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +3
Query: 165 KHPVDGFSAGLIDEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEI 344
K P SAG + E ++F W TI+GP D+ Y GG F + FP DYP PP V F +++
Sbjct: 15 KDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKV 73
Query: 345 WHPNVYSDGKVCISIL 392
+HPNV S+G +C+ IL
Sbjct: 74 FHPNVNSNGSICLDIL 89
>TAIR9_protein||AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 149
Score = 77 bits (187), Expect = 5e-015
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 1/76 (1%)
Frame = +3
Query: 165 KHPVDGFSAGLIDEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEI 344
K P SAG + E ++F W TI+GP D+ Y GG F + FP DYP PP V F +++
Sbjct: 15 KDPPTSCSAGPVAE-DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKV 73
Query: 345 WHPNVYSDGKVCISIL 392
+HPNV S+G +C+ IL
Sbjct: 74 FHPNVNSNGSICLDIL 89
>TAIR9_protein||AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 158
Score = 74 bits (181), Expect = 3e-014
Identities = 34/78 (43%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Frame = +3
Query: 162 CKHPVDGFSAGLIDEA-NIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTS 338
C V G G A ++F W TI+GP D+ Y GG F + FP DYP PP V F +
Sbjct: 21 CSAEVSGHCYGTCPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRT 80
Query: 339 EIWHPNVYSDGKVCISIL 392
+++HPNV S+G +C+ IL
Sbjct: 81 KVFHPNVNSNGSICLDIL 98
>TAIR9_protein||AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 191
Score = 72 bits (176), Expect = 1e-013
Identities = 29/61 (47%), Positives = 41/61 (67%)
Frame = +3
Query: 210 NIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNVYSDGKVCISI 389
++F W TI+GP D+ Y GG F + FP DYP PP V F ++++HPNV S+G +C+ I
Sbjct: 71 DMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDI 130
Query: 390 L 392
L
Sbjct: 131 L 131
>TAIR9_protein||AT5G25760.1 | Symbols: PEX4, UBC21 | PEX4 (PEROXIN4); protein
binding / ubiquitin-protein ligase | chr5:8967983-8969173 FORWARD
Length = 158
Score = 72 bits (175), Expect = 1e-013
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +3
Query: 195 LIDEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNV-YSDG 371
+ D+ NIF+W I GP +T Y+GG F S P YP PP VRF ++I+HPNV + G
Sbjct: 28 ICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTG 87
Query: 372 KVCISIL 392
++C+ IL
Sbjct: 88 EICLDIL 94
>TAIR9_protein||AT5G25760.2 | Symbols: PEX4 | PEX4 (PEROXIN4); protein binding /
ubiquitin-protein ligase | chr5:8967983-8969173 FORWARD
Length = 158
Score = 72 bits (175), Expect = 1e-013
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Frame = +3
Query: 195 LIDEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNV-YSDG 371
+ D+ NIF+W I GP +T Y+GG F S P YP PP VRF ++I+HPNV + G
Sbjct: 28 ICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTG 87
Query: 372 KVCISIL 392
++C+ IL
Sbjct: 88 EICLDIL 94
>TAIR9_protein||AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 |
SCE1 (SUMO CONJUGATION ENZYME 1); SUMO ligase | chr3:21428831-21430110
REVERSE
Length = 161
Score = 67 bits (163), Expect = 3e-012
Identities = 29/62 (46%), Positives = 38/62 (61%)
Frame = +3
Query: 210 NIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNVYSDGKVCISI 389
N+ W+ TI G T ++GGFF M F DYP+ PP +F +HPNVY G VC+SI
Sbjct: 38 NLMVWHCTIPGKAGTDWEGGFFPLTMHFSEDYPSKPPKCKFPQGFFHPNVYPSGTVCLSI 97
Query: 390 LH 395
L+
Sbjct: 98 LN 99
>TAIR9_protein||AT1G50490.1 | Symbols: UBC20 | UBC20 (ubiquitin-conjugating
enzyme 20); ubiquitin-protein ligase | chr1:18705005-18706303 REVERSE
Length = 181
Score = 64 bits (155), Expect = 3e-011
Identities = 29/64 (45%), Positives = 40/64 (62%)
Frame = +3
Query: 201 DEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNVYSDGKVC 380
+E NIF W TI G DT+++G + +SF NDYP PP V+F + +HPNV G +C
Sbjct: 60 EEDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNIC 119
Query: 381 ISIL 392
+ IL
Sbjct: 120 LDIL 123
>TAIR9_protein||AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA
9); protein binding / ubiquitin-protein ligase | chr3:4423569-4424797
REVERSE
Length = 183
Score = 61 bits (146), Expect = 3e-010
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +3
Query: 210 NIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNVYSDGKVCISI 389
N++ W TIIGP T Y+GG F + FP+DYP PP + F + I+H NV + G + ++I
Sbjct: 64 NLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNI 123
Query: 390 L 392
L
Sbjct: 124 L 124
>TAIR9_protein||AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA
9); protein binding / ubiquitin-protein ligase | chr3:4423828-4424797
REVERSE
Length = 171
Score = 61 bits (146), Expect = 3e-010
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +3
Query: 210 NIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNVYSDGKVCISI 389
N++ W TIIGP T Y+GG F + FP+DYP PP + F + I+H NV + G + ++I
Sbjct: 64 NLYHWIATIIGPSGTPYEGGIFFLDIIFPSDYPFKPPKLVFKTRIYHCNVDTAGDLSVNI 123
Query: 390 L 392
L
Sbjct: 124 L 124
>TAIR9_protein||AT3G20060.1 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating
enzyme19); ubiquitin-protein ligase | chr3:7002927-7004283 REVERSE
Length = 182
Score = 60 bits (144), Expect = 5e-010
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +3
Query: 201 DEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNVYSDGKVC 380
+E NIF W TI G DT+++G + ++F NDYP P V+F + +HPNV G +C
Sbjct: 61 EEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNIC 120
Query: 381 ISIL 392
+ IL
Sbjct: 121 LDIL 124
>TAIR9_protein||AT3G20060.2 | Symbols: UBC19 | UBC19 (ubiquitin-conjugating
enzyme19); ubiquitin-protein ligase | chr3:7002927-7003727 REVERSE
Length = 137
Score = 60 bits (144), Expect = 5e-010
Identities = 27/64 (42%), Positives = 39/64 (60%)
Frame = +3
Query: 201 DEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNVYSDGKVC 380
+E NIF W TI G DT+++G + ++F NDYP P V+F + +HPNV G +C
Sbjct: 16 EEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNIC 75
Query: 381 ISIL 392
+ IL
Sbjct: 76 LDIL 79
>TAIR9_protein||AT5G50870.1 | Symbols: UBC27 | UBC27 (ubiquitin-conjugating
enzyme 27); ubiquitin-protein ligase | chr5:20699626-20700998 REVERSE
Length = 193
Score = 58 bits (138), Expect = 3e-009
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +3
Query: 210 NIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNVYS-DGKVCIS 386
N+ TI GP T Y+GG F ++ P+ YP PP ++F++++WHPN+ S G +C+
Sbjct: 31 NLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFEPPKMQFSTKVWHPNISSQSGAICLD 90
Query: 387 IL 392
IL
Sbjct: 91 IL 92
>TAIR9_protein||AT5G05080.1 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating
enzyme 22); ubiquitin-protein ligase | chr5:1498727-1499972 REVERSE
Length = 252
Score = 55 bits (130), Expect = 2e-008
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +3
Query: 171 PVDGFSAGLIDEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWH 350
P DG ++++ + + I GP T Y+ G F ++ +D+P++PP F ++I+H
Sbjct: 26 PPDGIKV-VVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFH 84
Query: 351 PNVYSDGKVCISIL 392
PNV S+G++C++ L
Sbjct: 85 PNVASNGEICVNTL 98
>TAIR9_protein||AT5G05080.2 | Symbols: UBC22 | UBC22 (ubiquitin-conjugating
enzyme 22); ubiquitin-protein ligase | chr5:1498727-1499972 REVERSE
Length = 252
Score = 55 bits (130), Expect = 2e-008
Identities = 24/74 (32%), Positives = 45/74 (60%), Gaps = 1/74 (1%)
Frame = +3
Query: 171 PVDGFSAGLIDEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWH 350
P DG ++++ + + I GP T Y+ G F ++ +D+P++PP F ++I+H
Sbjct: 26 PPDGIKV-VVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFPHSPPKGYFMTKIFH 84
Query: 351 PNVYSDGKVCISIL 392
PNV S+G++C++ L
Sbjct: 85 PNVASNGEICVNTL 98
>TAIR9_protein||AT2G46030.1 | Symbols: UBC6 | UBC6 (ubiquitin-conjugating enzyme
6); ubiquitin-protein ligase | chr2:18932243-18933421 REVERSE
Length = 184
Score = 53 bits (126), Expect = 6e-008
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 228 VTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNV-YSDGKVCISILH 395
VT GP D+LY GG + + P YP P+V F ++I+HPNV S G VC+ +++
Sbjct: 34 VTFHGPTDSLYQGGVWKIKVELPEAYPYKSPSVGFVNKIYHPNVDESSGAVCLDVIN 90
>TAIR9_protein||AT3G17000.1 | Symbols: UBC32 | UBC32 (ubiquitin-conjugating
enzyme 32); ubiquitin-protein ligase | chr3:5797296-5799467 FORWARD
Length = 310
Score = 52 bits (123), Expect = 1e-007
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 5/85 (5%)
Frame = +3
Query: 168 HPVDGFSAGLIDEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIW 347
+P D F + ++E NIFEW I GP DT ++GG ++ + P DYP PP+ +
Sbjct: 26 NPSDDFMSLPLEE-NIFEWQFAIRGPGDTEFEGGIYHGRIQLPADYPFKPPSFMLLTP-- 82
Query: 348 HPNVYSDGKVCISI--LHPPGDDPN 416
+ ++ K+C+SI HP P+
Sbjct: 83 NGRFETNTKICLSISNYHPEHWQPS 107
>TAIR9_protein||AT1G63800.1 | Symbols: UBC5 | UBC5 (ubiquitin-conjugating enzyme
5); ubiquitin-protein ligase | chr1:23667888-23669003 REVERSE
Length = 186
Score = 51 bits (120), Expect = 3e-007
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = +3
Query: 219 EWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNV-YSDGKVCISILH 395
E+ V GP D++Y+GG + + P+ YP P+V F ++I+HPNV G VC+ +++
Sbjct: 31 EFFVEFSGPKDSIYEGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDEMSGSVCLDVIN 90
>TAIR9_protein||AT5G41340.1 | Symbols: UBC4, ATUBC4 | UBC4 (UBIQUITIN
CONJUGATING ENZYME 4); ubiquitin-protein ligase |
chr5:16538296-16539956 REVERSE
Length = 188
Score = 51 bits (120), Expect = 3e-007
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Frame = +3
Query: 219 EWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIWHPNVYS-DGKVCISILH 395
E+ V GP D+LY GG + + P+ YP P+V F ++I+HPNV G VC+ +++
Sbjct: 31 EFYVEFNGPKDSLYQGGVWKIRVELPDAYPYKSPSVGFITKIYHPNVDELSGSVCLDVIN 90
>TAIR9_protein||AT1G23260.1 | Symbols: MMZ1, UEV1A | MMZ1 (MMS ZWEI HOMOLOGUE
1); protein binding / ubiquitin-protein ligase | chr1:8257209-8258573
REVERSE
Length = 159
Score = 49 bits (115), Expect = 1e-006
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = +3
Query: 186 SAGLIDEANIF--EWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEI 344
S G+ D +I+ W TI+GPP+T Y+G F + +YP +PPTVRF + I
Sbjct: 33 SYGMDDADDIYMQSWTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRI 87
>TAIR9_protein||AT2G16920.1 | Symbols: UBC23, PFU2 | UBC23
(UBIQUITIN-CONJUGATING ENZYME 23); small conjugating protein ligase/
ubiquitin-protein ligase | chr2:7334559-7338827 REVERSE
Length = 1103
Score = 49 bits (115), Expect = 1e-006
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Frame = +3
Query: 234 IIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEIW--HPNVYSDGKVCISILH 395
I+G T Y G F P+DYP+ PP+ + S W +PN+Y +GKVC+S+L+
Sbjct: 886 IVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNLYEEGKVCLSLLN 941
>TAIR9_protein||AT1G70660.1 | Symbols: MMZ2, UEV1B | MMZ2 (MMS ZWEI HOMOLOGE 2);
protein binding / ubiquitin-protein ligase | chr1:26640755-26641949
FORWARD
Length = 160
Score = 47 bits (110), Expect = 5e-006
Identities = 21/48 (43%), Positives = 28/48 (58%)
Frame = +3
Query: 201 DEANIFEWNVTIIGPPDTLYDGGFFNAIMSFPNDYPNNPPTVRFTSEI 344
D+ + W TI+GP +T Y+G F + DYP +PPTVRF S I
Sbjct: 40 DDILMQSWTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQSRI 87
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,661,322,135
Number of Sequences: 33410
Number of Extensions: 4661322135
Number of Successful Extensions: 252909199
Number of sequences better than 0.0: 0
|