BLASTX 7.6.2
Query= RU27483 /QuerySize=262
(261 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G52010.1 | Symbols: | zinc finger (C2H2 type)... 153 3e-038
TAIR9_protein||AT4G12240.1 | Symbols: | zinc finger (C2H2 type)... 89 5e-019
>TAIR9_protein||AT5G52010.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr5:21121626-21122816 REVERSE
Length = 397
Score = 153 bits (385), Expect = 3e-038
Identities = 70/85 (82%), Positives = 78/85 (91%)
Frame = +1
Query: 7 VERKGIVTPPQPYICGVCGRKCKSNLDLTKHFKQLHERERQKKLNRMRSLKGKKRQRFKE 186
+ERKG VTP PYICGVCGRKCK+NLDL KHFKQLHERERQKK+NRMRSLKGKKRQ+FKE
Sbjct: 140 MERKGEVTPIDPYICGVCGRKCKTNLDLKKHFKQLHERERQKKVNRMRSLKGKKRQKFKE 199
Query: 187 RFISGNHKYNEAASTLIKPKVGYGL 261
R++SGN KYNEAA +L+ PKVGYGL
Sbjct: 200 RYVSGNEKYNEAARSLLTPKVGYGL 224
>TAIR9_protein||AT4G12240.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr4:7287895-7288989 FORWARD
Length = 365
Score = 89 bits (219), Expect = 5e-019
Identities = 39/86 (45%), Positives = 55/86 (63%)
Frame = +1
Query: 4 RVERKGIVTPPQPYICGVCGRKCKSNLDLTKHFKQLHERERQKKLNRMRSLKGKKRQRFK 183
++E KG+V PP+PY CGVC R+ +N L HFKQ+HE E QK++ ++ S KG +R R
Sbjct: 104 KLENKGLVKPPEPYFCGVCDRRFYTNEKLINHFKQIHETENQKRMRQIESSKGHRRVRLV 163
Query: 184 ERFISGNHKYNEAASTLIKPKVGYGL 261
++ KY AA ++ PK GYGL
Sbjct: 164 AKYSMKIEKYKRAARNVLTPKEGYGL 189
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,661,322,135
Number of Sequences: 33410
Number of Extensions: 4661322135
Number of Successful Extensions: 252909199
Number of sequences better than 0.0: 0
|