BLASTX 7.6.2
Query= RU27485 /QuerySize=498
(497 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G20120.1 | Symbols: COV1 | COV1 (CONTINUOUS VA... 175 1e-044
TAIR9_protein||AT2G20130.1 | Symbols: LCV1 | LCV1 (LIKE COV 1) |... 171 3e-043
TAIR9_protein||AT2G18460.2 | Symbols: LCV3 | LCV3 (like cov 3) |... 165 2e-041
TAIR9_protein||AT2G18460.1 | Symbols: LCV3 | LCV3 (like cov 3) |... 156 8e-039
TAIR9_protein||AT1G43130.1 | Symbols: LCV2 | LCV2 (LIKE COV 2) |... 131 4e-031
>TAIR9_protein||AT2G20120.1 | Symbols: COV1 | COV1 (CONTINUOUS VASCULAR RING) |
chr2:8687568-8689321 REVERSE
Length = 269
Score = 175 bits (443), Expect = 1e-044
Identities = 86/119 (72%), Positives = 90/119 (75%), Gaps = 4/119 (3%)
Frame = +1
Query: 151 RDRELLIPVADSGDED----LXXXXXXXXXXXHHLTGRETFYKVFRSWASKKFMTGCVIL 318
RDRELLIPVADSGD+D H + ET R WASKKFMTGCVIL
Sbjct: 15 RDRELLIPVADSGDKDDGSSSKPSSSSSASSSSHQSSHETLSLFIRGWASKKFMTGCVIL 74
Query: 319 FPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGFVTSITFIFLVGVFMSSWLGASV 495
PIAITFYITWWFIHFVDGFFSPIYAQLGIN+FG GF+TSI FIFLVGVFMSSWLGASV
Sbjct: 75 LPIAITFYITWWFIHFVDGFFSPIYAQLGINVFGFGFLTSIAFIFLVGVFMSSWLGASV 133
>TAIR9_protein||AT2G20130.1 | Symbols: LCV1 | LCV1 (LIKE COV 1) |
chr2:8690614-8692234 REVERSE
Length = 257
Score = 171 bits (432), Expect = 3e-043
Identities = 84/118 (71%), Positives = 88/118 (74%), Gaps = 3/118 (2%)
Frame = +1
Query: 151 RDRELLIPVADSGDED---LXXXXXXXXXXXHHLTGRETFYKVFRSWASKKFMTGCVILF 321
RDRELLIPVAD GD+D H +G ET R WASKKFMTGCVIL
Sbjct: 6 RDRELLIPVADFGDKDDGSSSKPSSSSSASSSHQSGHETLSLFIRGWASKKFMTGCVILL 65
Query: 322 PIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGFVTSITFIFLVGVFMSSWLGASV 495
PIA+TFY TWWFIHFVDGFFSPIYA LGINIFG GF+TSI FIFLVGVFMSSWLGASV
Sbjct: 66 PIAVTFYTTWWFIHFVDGFFSPIYALLGINIFGFGFLTSIAFIFLVGVFMSSWLGASV 123
>TAIR9_protein||AT2G18460.2 | Symbols: LCV3 | LCV3 (like cov 3) |
chr2:8001320-8002810 FORWARD
Length = 252
Score = 165 bits (416), Expect = 2e-041
Identities = 81/118 (68%), Positives = 89/118 (75%), Gaps = 3/118 (2%)
Frame = +1
Query: 151 RDRELLIPVADSG---DEDLXXXXXXXXXXXHHLTGRETFYKVFRSWASKKFMTGCVILF 321
RD E LIP+ SG + + H+ G+E YKV RSWASKKFMTGCVIL
Sbjct: 6 RDLERLIPMHKSGASPRDVVLSVPPSPLASPIHVAGKEAIYKVIRSWASKKFMTGCVILL 65
Query: 322 PIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGFVTSITFIFLVGVFMSSWLGASV 495
PIA+TFY TWWFIHFVDGFFSPIY LGIN+FGLGFVTSITFIF+VGVFMSSWLGASV
Sbjct: 66 PIAVTFYFTWWFIHFVDGFFSPIYTHLGINMFGLGFVTSITFIFMVGVFMSSWLGASV 123
>TAIR9_protein||AT2G18460.1 | Symbols: LCV3 | LCV3 (like cov 3) |
chr2:8001638-8002854 FORWARD
Length = 214
Score = 156 bits (393), Expect = 8e-039
Identities = 70/82 (85%), Positives = 75/82 (91%)
Frame = +1
Query: 250 RETFYKVFRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGF 429
++ YKV RSWASKKFMTGCVIL PIA+TFY TWWFIHFVDGFFSPIY LGIN+FGLGF
Sbjct: 3 KQAIYKVIRSWASKKFMTGCVILLPIAVTFYFTWWFIHFVDGFFSPIYTHLGINMFGLGF 62
Query: 430 VTSITFIFLVGVFMSSWLGASV 495
VTSITFIF+VGVFMSSWLGASV
Sbjct: 63 VTSITFIFMVGVFMSSWLGASV 84
>TAIR9_protein||AT1G43130.1 | Symbols: LCV2 | LCV2 (LIKE COV 2) |
chr1:16228661-16231158 REVERSE
Length = 262
Score = 131 bits (327), Expect = 4e-031
Identities = 56/82 (68%), Positives = 68/82 (82%)
Frame = +1
Query: 250 RETFYKVFRSWASKKFMTGCVILFPIAITFYITWWFIHFVDGFFSPIYAQLGINIFGLGF 429
R+ Y V +SW SKKFMTG V+LFP+A+TF ITWWFI FVDGFFSPIY LG++IFGLGF
Sbjct: 38 RKACYGVLQSWVSKKFMTGFVVLFPVAVTFLITWWFIQFVDGFFSPIYENLGVDIFGLGF 97
Query: 430 VTSITFIFLVGVFMSSWLGASV 495
+TS+ F F VG+F SSWLG++V
Sbjct: 98 ITSVLFTFFVGIFASSWLGSTV 119
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,661,322,135
Number of Sequences: 33410
Number of Extensions: 4661322135
Number of Successful Extensions: 252909199
Number of sequences better than 0.0: 0
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