BLASTX 7.6.2
Query= RU27758 /QuerySize=507
(506 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G60250.1 | Symbols: | zinc finger (C3HC4-type... 132 1e-031
TAIR9_protein||AT5G07640.1 | Symbols: | zinc finger (C3HC4-type... 91 3e-019
TAIR9_protein||AT3G45580.1 | Symbols: | zinc finger (C3HC4-type... 84 4e-017
TAIR9_protein||AT2G25370.1 | Symbols: | zinc finger protein-rel... 83 9e-017
TAIR9_protein||AT2G19610.1 | Symbols: | zinc finger (C3HC4-type... 82 2e-016
TAIR9_protein||AT2G19610.2 | Symbols: | zinc finger (C3HC4-type... 82 2e-016
TAIR9_protein||AT3G43750.1 | Symbols: | zinc finger (C3HC4-type... 80 5e-016
TAIR9_protein||AT5G37560.1 | Symbols: | zinc ion binding | chr5... 78 2e-015
TAIR9_protein||AT2G21420.1 | Symbols: | zinc finger protein-rel... 77 5e-015
TAIR9_protein||AT2G26130.1 | Symbols: | zinc finger (C3HC4-type... 76 9e-015
TAIR9_protein||AT2G26135.1 | Symbols: | zinc finger (C3HC4-type... 76 1e-014
TAIR9_protein||AT3G45570.1 | Symbols: | zinc finger (C3HC4-type... 75 3e-014
TAIR9_protein||AT3G45490.1 | Symbols: | FUNCTIONS IN: molecular... 72 1e-013
TAIR9_protein||AT3G45460.1 | Symbols: | zinc ion binding | chr3... 57 4e-009
TAIR9_protein||AT3G45560.1 | Symbols: | zinc finger (C3HC4-type... 57 7e-009
TAIR9_protein||AT3G45500.1 | Symbols: | FUNCTIONS IN: molecular... 49 1e-006
>TAIR9_protein||AT5G60250.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:24252226-24254710 FORWARD
Length = 656
Score = 132 bits (332), Expect = 1e-031
Identities = 66/120 (55%), Positives = 88/120 (73%), Gaps = 1/120 (0%)
Frame = +3
Query: 150 FRLYFKGLVSEEQ-VGDQKLVLAGIGVAICDPKDNLVFEVRKPLIGNGLSRNSAQLKALI 326
+RLYFKGLVS+E G V++G GVAICD +DNL+FE++ PLI NG+SR A+LKALI
Sbjct: 145 YRLYFKGLVSDENGKGKMTDVVSGFGVAICDQRDNLLFEMKGPLIDNGMSRQGAELKALI 204
Query: 327 EGLTAAVSLGLKRITFFGDNYPIFQFVNGKWPAKQRKVVNLVNQVKSLRSKFTQCNSRLV 506
GLT A+ LG+K I FF D+YPIFQ+V GKW AKQ+K+ L++ ++S+ F+ LV
Sbjct: 205 RGLTEALKLGIKHIVFFCDSYPIFQYVTGKWMAKQKKISLLLDDLQSIMQHFSSYQHVLV 264
>TAIR9_protein||AT5G07640.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr5:2414847-2415876 FORWARD
Length = 317
Score = 91 bits (225), Expect = 3e-019
Identities = 51/117 (43%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
Frame = +3
Query: 150 FRLYFKGLVSEEQVGDQKLVLAGIGVAICDPKDNLVFEVRKPLIG-NGLSRNSAQLKALI 326
F LY KGLVSEE + D+ + G GVAICD +DN ++E+ K L G + +A+L ALI
Sbjct: 7 FWLYCKGLVSEEVIRDESKQIGGFGVAICDHEDNRLYEMNKVLGGEESTHQQAAELAALI 66
Query: 327 EGLTAAVSLGLKRITFFGDNYPIFQFVNGKWPAKQRKVVNLVNQVKSLRSKFTQCNS 497
L A+ L L R+TFF D+ I ++V GK + V LV +V L+SKF+ C +
Sbjct: 67 HALNWALELDLGRVTFFCDDSNILEYVTGKAEPNESTVATLVKEVSLLQSKFSFCEA 123
>TAIR9_protein||AT3G45580.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:16729989-16731511 REVERSE
Length = 409
Score = 84 bits (206), Expect = 4e-017
Identities = 45/112 (40%), Positives = 70/112 (62%), Gaps = 4/112 (3%)
Frame = +3
Query: 150 FRLYFKGLVSEEQVGDQKLVLAGIGVAICDPKDNLVFEVRKPLIGNGLSRNSAQLKALIE 329
+RLYFKGLVSEE V +LAG GVAICD DNL+F++++ + + ++ ++ AL
Sbjct: 28 YRLYFKGLVSEETVE----LLAGFGVAICDKDDNLLFQMKEQVHDSRVTVLEVEIMALKR 83
Query: 330 GLTAAVSLGLKRITFFGDNYPIFQFVNGKWPAKQRKVVNLVNQVKSLRSKFT 485
GLT AV LG+ I+ + D+Y IF+ V K + + L++ V+ +R + T
Sbjct: 84 GLTEAVGLGIDNISIYSDHYRIFELVMEKSASAEENFALLMDNVQHIRQRLT 135
>TAIR9_protein||AT2G25370.1 | Symbols: | zinc finger protein-related |
chr2:10806700-10809794 FORWARD
Length = 604
Score = 83 bits (203), Expect = 9e-017
Identities = 46/121 (38%), Positives = 76/121 (62%), Gaps = 3/121 (2%)
Frame = +3
Query: 150 FRLYFKGLVSEEQVGD--QKLVLAGIGVAICDPKDNLVFEVRKPLIGNGLSRNSAQLKAL 323
+RL FKGLV+ E V D +K V AG GVAICD KDNL+ E+++ L +SR ++ AL
Sbjct: 154 YRLCFKGLVNYEAVADDVEKAVKAGFGVAICDEKDNLLHEIKESLRDIEISRRGVEIMAL 213
Query: 324 IEGLTAAVSLGLKRITFFGDNYPIFQFVNGKWPAKQRKVVNLVNQVKSLRSKFTQCNSRL 503
+ GL+ + LG++ + + D+ I+Q + G+ +K +K+ +LV +V+ + K ++ L
Sbjct: 214 VRGLSESFDLGMRNVVIYCDDDWIYQSIIGRGKSK-KKIDHLVEEVQGILEKMACIDAVL 272
Query: 504 V 506
V
Sbjct: 273 V 273
>TAIR9_protein||AT2G19610.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:8484455-8485723 FORWARD
Length = 398
Score = 82 bits (200), Expect = 2e-016
Identities = 44/118 (37%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Frame = +3
Query: 150 FRLYFKGLVSEEQVGDQKLVLAGIGVAICDPKDNLVFEVRKPLIGNGLSRN--SAQLKAL 323
+RLY KGLVSEE + D +++ G+G+++CD D E+ K L L+ + +A+L A+
Sbjct: 50 YRLYSKGLVSEELIKDDTMLVVGLGLSLCDSHDYTKQEINKALRNQKLAAHPEAAELAAI 109
Query: 324 IEGLTAAVSLGLKRITFFGDNYPIFQFVNGKWPAKQRKVVNLVNQVKSLRSKFTQCNS 497
I GL A+ LG++RI FF D+ I +V K + V L+ V L+++FT C +
Sbjct: 110 IHGLKWALELGIERIQFFCDDSNILAYVTRKAAPNESIVAKLLEHVSLLQTRFTSCQA 167
>TAIR9_protein||AT2G19610.2 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:8484455-8485863 FORWARD
Length = 419
Score = 82 bits (200), Expect = 2e-016
Identities = 44/118 (37%), Positives = 70/118 (59%), Gaps = 2/118 (1%)
Frame = +3
Query: 150 FRLYFKGLVSEEQVGDQKLVLAGIGVAICDPKDNLVFEVRKPLIGNGLSRN--SAQLKAL 323
+RLY KGLVSEE + D +++ G+G+++CD D E+ K L L+ + +A+L A+
Sbjct: 50 YRLYSKGLVSEELIKDDTMLVVGLGLSLCDSHDYTKQEINKALRNQKLAAHPEAAELAAI 109
Query: 324 IEGLTAAVSLGLKRITFFGDNYPIFQFVNGKWPAKQRKVVNLVNQVKSLRSKFTQCNS 497
I GL A+ LG++RI FF D+ I +V K + V L+ V L+++FT C +
Sbjct: 110 IHGLKWALELGIERIQFFCDDSNILAYVTRKAAPNESIVAKLLEHVSLLQTRFTSCQA 167
>TAIR9_protein||AT3G43750.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:15646460-15647566 FORWARD
Length = 347
Score = 80 bits (197), Expect = 5e-016
Identities = 45/119 (37%), Positives = 72/119 (60%), Gaps = 4/119 (3%)
Frame = +3
Query: 150 FRLYFKGLVSEEQVGDQKLVLAGIGVAICDPKDNLVFEVRKPLIGNGLSRNSAQLKALIE 329
++LYFKG+V EE +LAG GVAI D D L+F++++P+ G+ ++ A+L AL +
Sbjct: 13 YKLYFKGIVIEE----TSQLLAGFGVAIFDQDDKLLFQMKRPIHGSDITVLEAELTALKQ 68
Query: 330 GLTAAVSLGLKRITFFGDNYPIFQFVNGKWPAKQRKVVNLVNQVKSLRSKFTQCNSRLV 506
GLT + LGL RI+ D+ I++ V G+ +Q + L+N V+ +R + N LV
Sbjct: 69 GLTETMKLGLDRISICCDHDHIYELVMGRSTPEQDNIAMLMNDVQRMRQQLRYSNPILV 127
>TAIR9_protein||AT5G37560.1 | Symbols: | zinc ion binding |
chr5:14921986-14923790 FORWARD
Length = 445
Score = 78 bits (191), Expect = 2e-015
Identities = 46/120 (38%), Positives = 70/120 (58%), Gaps = 2/120 (1%)
Frame = +3
Query: 150 FRLYFKGLVSEEQVGDQK-LVLAGIGVAICDPKDNLVFEVRKPLIGNGLSRNSAQLKALI 326
++LYFKGLVS E D+K +V G GVAICD DNL + + K L ++R A + ALI
Sbjct: 36 YKLYFKGLVSGETATDKKAIVKVGFGVAICDEADNLFYGMNKSLYEAVINREEADILALI 95
Query: 327 EGLTAAVSLGLKRITFFGDNYPIFQFVNGKWPAKQRKVVNLVNQVKSLRSKFTQCNSRLV 506
GL ++ G+K + D+ I+Q + G+ Q+K V+L+ +V+ LR + + LV
Sbjct: 96 TGLYESIHRGVKNVVICCDDRQIYQTIIGR-EKPQQKNVHLLEEVQRLRGRLASTGTVLV 154
>TAIR9_protein||AT2G21420.1 | Symbols: | zinc finger protein-related |
chr2:9169713-9171746 FORWARD
Length = 469
Score = 77 bits (188), Expect = 5e-015
Identities = 44/121 (36%), Positives = 74/121 (61%), Gaps = 3/121 (2%)
Frame = +3
Query: 150 FRLYFKGLVSEEQVGD-QKLVLAGIGVAICDPKDNLVFEVRKPLIGNG-LSRNSAQLKAL 323
+RL+FKGLVS+E D +++V AG G+AICD + L++ ++K L G+ ++ ++KAL
Sbjct: 50 YRLFFKGLVSDETTTDMEEIVKAGFGIAICDEANTLLYNMKKSLNGDDVINPEEVEIKAL 109
Query: 324 IEGLTAAVSLGLKRITFFGDNYPIFQFVNGKWPAKQRKVVNLVNQVKSLRSKFTQCNSRL 503
I L ++ + L+ + +Y IFQ + G+ Q+ +V+LV QV+ LR K + L
Sbjct: 110 ICVLNVSIQMELRNVMICCGDYQIFQILTGR-GKPQQNIVHLVEQVQHLRGKLSSTEVVL 168
Query: 504 V 506
V
Sbjct: 169 V 169
>TAIR9_protein||AT2G26130.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:11127134-11128476 FORWARD
Length = 399
Score = 76 bits (186), Expect = 9e-015
Identities = 44/112 (39%), Positives = 67/112 (59%), Gaps = 4/112 (3%)
Frame = +3
Query: 150 FRLYFKGLVSEEQVGDQKLVLAGIGVAICDPKDNLVFEVRKPLIGNGLSRNSAQLKALIE 329
+RLYFKGLV+EE ++++LAG GVAIC KD+L+F+++ + ++ +L AL
Sbjct: 14 YRLYFKGLVTEE----KEMLLAGFGVAICGDKDDLLFDLKVSIHDPTITLLEVELIALKS 69
Query: 330 GLTAAVSLGLKRITFFGDNYPIFQFVNGKWPAKQRKVVNLVNQVKSLRSKFT 485
GL AVSLG+ I+ D+ IF+ V G KQ + L+ V+ +R T
Sbjct: 70 GLNQAVSLGINHISICCDHEYIFELVMGISTPKQESIALLLRDVQGIRKYLT 121
>TAIR9_protein||AT2G26135.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr2:11130119-11131514 FORWARD
Length = 385
Score = 76 bits (185), Expect = 1e-014
Identities = 43/119 (36%), Positives = 70/119 (58%), Gaps = 4/119 (3%)
Frame = +3
Query: 150 FRLYFKGLVSEEQVGDQKLVLAGIGVAICDPKDNLVFEVRKPLIGNGLSRNSAQLKALIE 329
+ LYFKGLVSEE + A VAIC KD L+F+++ P+ + ++ A+L AL
Sbjct: 27 YSLYFKGLVSEE----SPKLSAEFRVAICGYKDGLMFQMKGPIHDSAITLLEAELMALKY 82
Query: 330 GLTAAVSLGLKRITFFGDNYPIFQFVNGKWPAKQRKVVNLVNQVKSLRSKFTQCNSRLV 506
GL+ AV+LG+ I+ DN IF++V G+ ++ + L+ V+ +R +FT + L+
Sbjct: 83 GLSEAVTLGINHISICCDNNQIFEWVMGRSTPQEENIAMLIRDVQGIRKQFTSSIAVLI 141
>TAIR9_protein||AT3G45570.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:16725094-16726116 REVERSE
Length = 313
Score = 75 bits (182), Expect = 3e-014
Identities = 42/113 (37%), Positives = 69/113 (61%), Gaps = 5/113 (4%)
Frame = +3
Query: 150 FRLYFKGLVSEEQVGDQKLVLAGIGVAICDPKDNLVFEVRKPLIGNG-LSRNSAQLKALI 326
+ LYFKGLVSEE +LAG VAICD DNL+F++++ + + ++ +L AL
Sbjct: 16 YSLYFKGLVSEETTE----LLAGFAVAICDKDDNLLFQMKEQVHDSRVVTLMEVELMALK 71
Query: 327 EGLTAAVSLGLKRITFFGDNYPIFQFVNGKWPAKQRKVVNLVNQVKSLRSKFT 485
GLT V LG+ I+ + D+Y IF+ V + ++Q ++ L++ V+ +R + T
Sbjct: 72 RGLTEVVRLGIDHISIYCDHYQIFELVMERSVSEQENILMLMDDVQRIRKRLT 124
>TAIR9_protein||AT3G45490.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: inflorescence meristem; BEST
Arabidopsis thaliana protein match is: zinc finger protein-related
(TAIR:AT2G25370.1); Has 70 Blast hits to 67 proteins in 6 species:
Archae - 0; Bacteria - 2; Metazoa - 0; Fungi - 0; Plants - 68; Viruses
- 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr3:16687066-16687838 REVERSE
Length = 212
Score = 72 bits (176), Expect = 1e-013
Identities = 46/120 (38%), Positives = 70/120 (58%), Gaps = 12/120 (10%)
Frame = +3
Query: 153 RLYFKGLVSEEQVGDQKLVLAGIGVAICDPKDNLVFEVRKPLIGNGLSRNSAQLKALIEG 332
RLY KGLVS + V AG GVAICD D L+FE+++ + +++ALI G
Sbjct: 32 RLYSKGLVSTDNVA------AGFGVAICDQMDELLFEMKESV----SDVEGVKVRALIRG 81
Query: 333 LTAAVSLGLKRITFFGDNYPIFQ-FVNGKWPAKQRKVV-NLVNQVKSLRSKFTQCNSRLV 506
L+ ++ LG+++I + D+ ++Q +GK KQ KVV L+ +V+ LR KF + LV
Sbjct: 82 LSESLDLGIRKIVIYCDDNELYQNITSGKCKPKQIKVVKQLIKEVQRLREKFASSEAILV 141
>TAIR9_protein||AT3G45460.1 | Symbols: | zinc ion binding |
chr3:16678680-16680043 REVERSE
Length = 390
Score = 57 bits (137), Expect = 4e-009
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 4/113 (3%)
Frame = +3
Query: 150 FRLYFKGLVSEEQVGDQKLVLAGIGVAICDPKDN-LVFEVRKPLIGNGLSRNSAQLKALI 326
+ LYFKGLV E+ + AG VAI +D L+F+++ L + ++ A+L AL
Sbjct: 29 YNLYFKGLVREKTSAQ---LSAGFEVAIFREEDEYLLFQMKGSLHDSTVTVLEAELMALK 85
Query: 327 EGLTAAVSLGLKRITFFGDNYPIFQFVNGKWPAKQRKVVNLVNQVKSLRSKFT 485
GLT AVSLG+ I+ D +++ V G+ ++ + L++ V+ +R + T
Sbjct: 86 RGLTEAVSLGINHISICCDRLELYELVMGRLAPEKENIALLMDDVQCIRRELT 138
>TAIR9_protein||AT3G45560.1 | Symbols: | zinc finger (C3HC4-type RING finger)
family protein | chr3:16719630-16722674 REVERSE
Length = 504
Score = 57 bits (135), Expect = 7e-009
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 1/91 (1%)
Frame = +3
Query: 216 GIGVAICDPKDNLVFEVR-KPLIGNGLSRNSAQLKALIEGLTAAVSLGLKRITFFGDNYP 392
G GVAICD +D L++ ++ + ++ A+L AL GL AV LG+ I+F+ D+
Sbjct: 26 GFGVAICDQEDKLLYHIKGSRHHDSAITVLEAELTALKRGLIEAVGLGINHISFYCDHDQ 85
Query: 393 IFQFVNGKWPAKQRKVVNLVNQVKSLRSKFT 485
IF+ V G +Q + L++ V+ +R +FT
Sbjct: 86 IFELVMGISVPEQDNIALLMDDVQRIRKQFT 116
>TAIR9_protein||AT3G45500.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
zinc finger (C3HC4-type RING finger) family protein (TAIR:AT3G45580.1);
Has 40 Blast hits to 38 proteins in 2 species: Archae - 0; Bacteria -
0; Metazoa - 0; Fungi - 0; Plants - 40; Viruses - 0; Other Eukaryotes -
0 (source: NCBI BLink). | chr3:16688418-16689693 REVERSE
Length = 202
Score = 49 bits (115), Expect = 1e-006
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Frame = +3
Query: 156 LYFKGLVSEEQVGDQKLVLAGIGVAICDPKDNLVFEVRKPLIGNGLSRNSAQLKALIEGL 335
LYFKGLV ++ LAG GVAIC +D+++F++ P+ G+ ++ A+L AL GL
Sbjct: 17 LYFKGLVGDDS-------LAGFGVAICGHRDDILFQLNAPIHGSDITVLEAELMALKRGL 69
Query: 336 TAA 344
A
Sbjct: 70 IEA 72
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,689,689,278
Number of Sequences: 33410
Number of Extensions: 4689689278
Number of Successful Extensions: 252986479
Number of sequences better than 0.0: 0
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