BLASTX 7.6.2
Query= RU27841 /QuerySize=508
(507 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G53160.1 | Symbols: | unknown protein | chr5:... 97 6e-021
TAIR9_protein||AT5G53160.2 | Symbols: | unknown protein | chr5:... 97 6e-021
TAIR9_protein||AT4G27920.1 | Symbols: | unknown protein | chr4:... 95 2e-020
TAIR9_protein||AT1G01360.1 | Symbols: | unknown protein | chr1:... 89 2e-018
TAIR9_protein||AT4G01026.1 | Symbols: | unknown protein | chr4:... 82 1e-016
TAIR9_protein||AT2G38310.1 | Symbols: | unknown protein | chr2:... 59 1e-009
TAIR9_protein||AT5G45860.1 | Symbols: | Bet v I allergen family... 57 5e-009
TAIR9_protein||AT5G05440.1 | Symbols: | unknown protein | chr5:... 56 9e-009
TAIR9_protein||AT4G17870.1 | Symbols: | FUNCTIONS IN: molecular... 54 4e-008
TAIR9_protein||AT5G46790.1 | Symbols: | unknown protein | chr5:... 54 4e-008
TAIR9_protein||AT2G26040.1 | Symbols: | Bet v I allergen family... 53 1e-007
TAIR9_protein||AT5G45870.1 | Symbols: | Bet v I allergen family... 52 2e-007
TAIR9_protein||AT4G18620.1 | Symbols: | FUNCTIONS IN: molecular... 49 1e-006
>TAIR9_protein||AT5G53160.1 | Symbols: | unknown protein |
chr5:21561026-21561780 FORWARD
Length = 158
Score = 97 bits (239), Expect = 6e-021
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = +3
Query: 363 HHRHELKDHQCSSTLVRHIKAPVHLVWSLVRRFDQPQKYKPFVSRCVV 506
HH+HEL D+QCSSTLV+HI APVH+VWSLVRRFDQPQKYKPF+SRCVV
Sbjct: 22 HHKHELVDNQCSSTLVKHINAPVHIVWSLVRRFDQPQKYKPFISRCVV 69
>TAIR9_protein||AT5G53160.2 | Symbols: | unknown protein |
chr5:21561026-21561953 FORWARD
Length = 189
Score = 97 bits (239), Expect = 6e-021
Identities = 41/48 (85%), Positives = 46/48 (95%)
Frame = +3
Query: 363 HHRHELKDHQCSSTLVRHIKAPVHLVWSLVRRFDQPQKYKPFVSRCVV 506
HH+HEL D+QCSSTLV+HI APVH+VWSLVRRFDQPQKYKPF+SRCVV
Sbjct: 22 HHKHELVDNQCSSTLVKHINAPVHIVWSLVRRFDQPQKYKPFISRCVV 69
>TAIR9_protein||AT4G27920.1 | Symbols: | unknown protein |
chr4:13901220-13901939 FORWARD
Length = 184
Score = 95 bits (235), Expect = 2e-020
Identities = 40/48 (83%), Positives = 46/48 (95%)
Frame = +3
Query: 363 HHRHELKDHQCSSTLVRHIKAPVHLVWSLVRRFDQPQKYKPFVSRCVV 506
HHRHEL + QCSSTLV+HIKAP+HLVWS+VRRFD+PQKYKPF+SRCVV
Sbjct: 17 HHRHELVESQCSSTLVKHIKAPLHLVWSIVRRFDEPQKYKPFISRCVV 64
>TAIR9_protein||AT1G01360.1 | Symbols: | unknown protein | chr1:142138-142914
FORWARD
Length = 188
Score = 89 bits (218), Expect = 2e-018
Identities = 37/48 (77%), Positives = 44/48 (91%)
Frame = +3
Query: 363 HHRHELKDHQCSSTLVRHIKAPVHLVWSLVRRFDQPQKYKPFVSRCVV 506
HH+H +++QC+S LV+HIKAP+HLVWSLVRRFDQPQKYKPFVSRC V
Sbjct: 24 HHQHLCRENQCTSALVKHIKAPLHLVWSLVRRFDQPQKYKPFVSRCTV 71
>TAIR9_protein||AT4G01026.1 | Symbols: | unknown protein | chr4:447180-448109
FORWARD
Length = 212
Score = 82 bits (202), Expect = 1e-016
Identities = 34/47 (72%), Positives = 42/47 (89%)
Frame = +3
Query: 366 HRHELKDHQCSSTLVRHIKAPVHLVWSLVRRFDQPQKYKPFVSRCVV 506
H H +++QC+S LV++I+APVHLVWSLVRRFDQPQKYKPF+SRC V
Sbjct: 27 HLHHCRENQCTSVLVKYIQAPVHLVWSLVRRFDQPQKYKPFISRCTV 73
>TAIR9_protein||AT2G38310.1 | Symbols: | unknown protein |
chr2:16050251-16050874 FORWARD
Length = 208
Score = 59 bits (141), Expect = 1e-009
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +3
Query: 366 HRHELKDHQCSSTLVRHIKAPVHLVWSLVRRFDQPQKYKPFVSRCVV 506
H HE+ +QC S +++ I AP+ VWS+VRRFD PQ YK F+ C V
Sbjct: 43 HTHEVGPNQCCSAVIQEISAPISTVWSVVRRFDNPQAYKHFLKSCSV 89
>TAIR9_protein||AT5G45860.1 | Symbols: | Bet v I allergen family protein |
chr5:18604101-18604586 REVERSE
Length = 162
Score = 57 bits (136), Expect = 5e-009
Identities = 25/40 (62%), Positives = 29/40 (72%)
Frame = +3
Query: 381 KDHQCSSTLVRHIKAPVHLVWSLVRRFDQPQKYKPFVSRC 500
K H C STLV+ I AP+ LVWS++RRFD PQ YK FV C
Sbjct: 6 KYHTCGSTLVQTIDAPLSLVWSILRRFDNPQAYKQFVKTC 45
>TAIR9_protein||AT5G05440.1 | Symbols: | unknown protein | chr5:1609374-1609985
FORWARD
Length = 204
Score = 56 bits (134), Expect = 9e-009
Identities = 23/46 (50%), Positives = 32/46 (69%)
Frame = +3
Query: 363 HHRHELKDHQCSSTLVRHIKAPVHLVWSLVRRFDQPQKYKPFVSRC 500
HH H++ QC S++V+ I AP VW+LVRRFD P+ YK F+ +C
Sbjct: 48 HHTHDVGPDQCCSSVVQMIHAPPESVWALVRRFDNPKVYKNFIRQC 93
>TAIR9_protein||AT4G17870.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 25 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Streptomyces cyclase/dehydrase (InterPro:IPR005031); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT5G46790.1); Has 177
Blast hits to 177 proteins in 18 species: Archae - 0; Bacteria - 0;
Metazoa - 0; Fungi - 0; Plants - 177; Viruses - 0; Other Eukaryotes - 0
(source: NCBI BLink). | chr4:9928792-9929367 FORWARD
Length = 192
Score = 54 bits (129), Expect = 4e-008
Identities = 24/47 (51%), Positives = 30/47 (63%)
Frame = +3
Query: 366 HRHELKDHQCSSTLVRHIKAPVHLVWSLVRRFDQPQKYKPFVSRCVV 506
H ++L CSS + I AP LVWS+VRRFD+PQ YK F+ C V
Sbjct: 21 HTYQLDPGSCSSLHAQRIHAPPELVWSIVRRFDKPQTYKHFIKSCSV 67
>TAIR9_protein||AT5G46790.1 | Symbols: | unknown protein |
chr5:18984063-18984728 REVERSE
Length = 222
Score = 54 bits (129), Expect = 4e-008
Identities = 24/47 (51%), Positives = 32/47 (68%)
Frame = +3
Query: 366 HRHELKDHQCSSTLVRHIKAPVHLVWSLVRRFDQPQKYKPFVSRCVV 506
H ++L + +CSS L + I AP VWS+VRRFD+PQ YK F+ C V
Sbjct: 48 HTYQLGNGRCSSLLAQRIHAPPETVWSVVRRFDRPQIYKHFIKSCNV 94
>TAIR9_protein||AT2G26040.1 | Symbols: | Bet v I allergen family protein |
chr2:11094832-11095404 REVERSE
Length = 191
Score = 53 bits (125), Expect = 1e-007
Identities = 21/46 (45%), Positives = 30/46 (65%)
Frame = +3
Query: 363 HHRHELKDHQCSSTLVRHIKAPVHLVWSLVRRFDQPQKYKPFVSRC 500
+H+ E C+S + + I AP +VW L+RRFD P++YK FV RC
Sbjct: 25 YHQFEPDPTTCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRC 70
>TAIR9_protein||AT5G45870.1 | Symbols: | Bet v I allergen family protein |
chr5:18606564-18607043 REVERSE
Length = 160
Score = 52 bits (122), Expect = 2e-007
Identities = 21/40 (52%), Positives = 29/40 (72%)
Frame = +3
Query: 381 KDHQCSSTLVRHIKAPVHLVWSLVRRFDQPQKYKPFVSRC 500
+ H C ST+V+ I AP+ LVWS++RRFD P+ +K FV C
Sbjct: 6 EQHVCGSTVVQTINAPLPLVWSILRRFDNPKTFKHFVKTC 45
>TAIR9_protein||AT4G18620.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
Bet v I allergen family protein (TAIR:AT5G45870.1); Has 190 Blast hits
to 190 proteins in 20 species: Archae - 0; Bacteria - 0; Metazoa - 12;
Fungi - 0; Plants - 178; Viruses - 0; Other Eukaryotes - 0 (source:
NCBI BLink). | chr4:10254359-10254853 FORWARD
Length = 165
Score = 49 bits (115), Expect = 1e-006
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +3
Query: 381 KDHQCSSTLVRHIKAPVHLVWSLVRRFDQPQKYKPFVSRCVV 506
K +C S++V I+AP+ LVWS++R FD+PQ Y+ FV C +
Sbjct: 5 KQKRCRSSVVETIEAPLPLVWSILRSFDKPQAYQRFVKSCTM 46
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,717,856,939
Number of Sequences: 33410
Number of Extensions: 4717856939
Number of Successful Extensions: 253044128
Number of sequences better than 0.0: 0
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