BLASTX 7.6.2
Query= RU28619 /QuerySize=160
(159 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | PHYB (PH... 106 4e-024
TAIR9_protein||AT4G16250.1 | Symbols: PHYD | PHYD (PHYTOCHROME D... 106 5e-024
TAIR9_protein||AT4G18130.1 | Symbols: PHYE | PHYE (PHYTOCHROME D... 97 2e-021
TAIR9_protein||AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | PH... 91 1e-019
TAIR9_protein||AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | PH... 91 1e-019
TAIR9_protein||AT5G35840.1 | Symbols: PHYC | PHYC (phytochrome d... 89 5e-019
>TAIR9_protein||AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | PHYB (PHYTOCHROME B);
G-protein coupled photoreceptor/ protein histidine kinase/ red or
far-red light photoreceptor/ signal transducer | chr2:8140079-8144151
FORWARD
Length = 1173
Score = 106 bits (263), Expect = 4e-024
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = -3
Query: 157 MVYKFHEDEHGEVLAESKRPDLEPYLGLHYPATDIPQASRFLFKQNRVRMIV 2
MVYKFHEDEHGEV+AESKR DLEPY+GLHYPATDIPQASRFLFKQNRVRMIV
Sbjct: 274 MVYKFHEDEHGEVVAESKRDDLEPYIGLHYPATDIPQASRFLFKQNRVRMIV 325
>TAIR9_protein||AT4G16250.1 | Symbols: PHYD | PHYD (PHYTOCHROME DEFECTIVE D);
G-protein coupled photoreceptor/ red or far-red light photoreceptor/
signal transducer | chr4:9195602-9199486 REVERSE
Length = 1165
Score = 106 bits (262), Expect = 5e-024
Identities = 49/52 (94%), Positives = 51/52 (98%)
Frame = -3
Query: 157 MVYKFHEDEHGEVLAESKRPDLEPYLGLHYPATDIPQASRFLFKQNRVRMIV 2
MVYKFHEDEHGEV+AESKR DLEPY+GLHYPATDIPQASRFLFKQNRVRMIV
Sbjct: 277 MVYKFHEDEHGEVVAESKRNDLEPYIGLHYPATDIPQASRFLFKQNRVRMIV 328
>TAIR9_protein||AT4G18130.1 | Symbols: PHYE | PHYE (PHYTOCHROME DEFECTIVE E);
G-protein coupled photoreceptor/ protein histidine kinase/ signal
transducer | chr4:10042312-10045948 REVERSE
Length = 1113
Score = 97 bits (239), Expect = 2e-021
Identities = 43/51 (84%), Positives = 49/51 (96%)
Frame = -3
Query: 157 MVYKFHEDEHGEVLAESKRPDLEPYLGLHYPATDIPQASRFLFKQNRVRMI 5
MVY+FHED+HGEV++E +R DLEPYLGLHYPATDIPQA+RFLFKQNRVRMI
Sbjct: 239 MVYQFHEDDHGEVVSEIRRSDLEPYLGLHYPATDIPQAARFLFKQNRVRMI 289
>TAIR9_protein||AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | PHYA (PHYTOCHROME
A); G-protein coupled photoreceptor/ protein histidine kinase/ red or
far-red light photoreceptor/ signal transducer | chr1:3095498-3099216
REVERSE
Length = 1123
Score = 91 bits (225), Expect = 1e-019
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = -3
Query: 157 MVYKFHEDEHGEVLAESKRPDLEPYLGLHYPATDIPQASRFLFKQNRVRMIV 2
M YKFHED+HGEV++E +P LEPYLGLHYPATDIPQA+RFLF +N+VRMIV
Sbjct: 240 MAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIV 291
>TAIR9_protein||AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | PHYA (PHYTOCHROME
A); G-protein coupled photoreceptor/ protein histidine kinase/ red or
far-red light photoreceptor/ signal transducer | chr1:3095498-3098892
REVERSE
Length = 1015
Score = 91 bits (225), Expect = 1e-019
Identities = 40/52 (76%), Positives = 47/52 (90%)
Frame = -3
Query: 157 MVYKFHEDEHGEVLAESKRPDLEPYLGLHYPATDIPQASRFLFKQNRVRMIV 2
M YKFHED+HGEV++E +P LEPYLGLHYPATDIPQA+RFLF +N+VRMIV
Sbjct: 132 MAYKFHEDDHGEVVSEVTKPGLEPYLGLHYPATDIPQAARFLFMKNKVRMIV 183
>TAIR9_protein||AT5G35840.1 | Symbols: PHYC | PHYC (phytochrome defective c);
protein histidine kinase | chr5:14008049-14011619 FORWARD
Length = 1112
Score = 89 bits (219), Expect = 5e-019
Identities = 41/51 (80%), Positives = 45/51 (88%)
Frame = -3
Query: 157 MVYKFHEDEHGEVLAESKRPDLEPYLGLHYPATDIPQASRFLFKQNRVRMI 5
MVYKFHED HGEV+AE R D+EPYLGLHY ATDIPQASRFLF +N+VRMI
Sbjct: 235 MVYKFHEDGHGEVIAECCREDMEPYLGLHYSATDIPQASRFLFMRNKVRMI 285
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,746,010,162
Number of Sequences: 33410
Number of Extensions: 4746010162
Number of Successful Extensions: 253093100
Number of sequences better than 0.0: 0
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