BLASTX 7.6.2
Query= RU30368 /QuerySize=145
(144 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G06710.1 | Symbols: HAT14 | HAT14 (HOMEOBOX FR... 84 2e-017
TAIR9_protein||AT5G47370.1 | Symbols: HAT2 | HAT2; DNA binding /... 71 1e-013
TAIR9_protein||AT5G06710.2 | Symbols: HAT14 | HAT14 (HOMEOBOX FR... 70 2e-013
TAIR9_protein||AT4G16780.1 | Symbols: ATHB-2, HAT4, ATHB2 | ATHB... 69 4e-013
TAIR9_protein||AT2G44910.1 | Symbols: ATHB4, ATHB-4 | ATHB4 (ARA... 66 3e-012
TAIR9_protein||AT4G17460.1 | Symbols: HAT1 | HAT1; DNA binding /... 64 1e-011
TAIR9_protein||AT3G60390.1 | Symbols: HAT3 | HAT3 (HOMEOBOX-LEUC... 62 5e-011
TAIR9_protein||AT2G22800.1 | Symbols: HAT9 | HAT9; DNA binding /... 62 7e-011
TAIR9_protein||AT4G37790.1 | Symbols: HAT22 | HAT22; transcripti... 61 1e-010
TAIR9_protein||AT2G01430.1 | Symbols: ATHB17, ATHB-17 | ATHB17 (... 53 4e-008
TAIR9_protein||AT1G70920.1 | Symbols: ATHB18 | ATHB18 (Arabidops... 48 1e-006
>TAIR9_protein||AT5G06710.1 | Symbols: HAT14 | HAT14 (HOMEOBOX FROM ARABIDOPSIS
THALIANA); DNA binding / transcription factor | chr5:2068305-2070284
REVERSE
Length = 337
Score = 84 bits (206), Expect = 2e-017
Identities = 41/47 (87%), Positives = 44/47 (93%)
Frame = -3
Query: 142 SSRASDDDENGSTRKKLRLSKDQSAFLEESFKEHSTLNPKQKIALAK 2
+S +DDENGSTRKKLRLSKDQSAFLE+SFKEHSTLNPKQKIALAK
Sbjct: 176 ASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNPKQKIALAK 222
>TAIR9_protein||AT5G47370.1 | Symbols: HAT2 | HAT2; DNA binding / transcription
factor/ transcription repressor | chr5:19216482-19217647 REVERSE
Length = 284
Score = 71 bits (173), Expect = 1e-013
Identities = 35/45 (77%), Positives = 43/45 (95%), Gaps = 2/45 (4%)
Frame = -3
Query: 130 SDDDENG--STRKKLRLSKDQSAFLEESFKEHSTLNPKQKIALAK 2
SD++E+G ++RKKLRLSKDQSAFLEE+FKEH+TLNPKQK+ALAK
Sbjct: 118 SDEEEDGGETSRKKLRLSKDQSAFLEETFKEHNTLNPKQKLALAK 162
>TAIR9_protein||AT5G06710.2 | Symbols: HAT14 | HAT14 (HOMEOBOX FROM ARABIDOPSIS
THALIANA); DNA binding / transcription factor | chr5:2069093-2070284
REVERSE
Length = 238
Score = 70 bits (170), Expect = 2e-013
Identities = 33/39 (84%), Positives = 36/39 (92%)
Frame = -3
Query: 142 SSRASDDDENGSTRKKLRLSKDQSAFLEESFKEHSTLNP 26
+S +DDENGSTRKKLRLSKDQSAFLE+SFKEHSTLNP
Sbjct: 176 ASNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNP 214
>TAIR9_protein||AT4G16780.1 | Symbols: ATHB-2, HAT4, ATHB2 | ATHB-2 (ARABIDOPSIS
THALIANA HOMEOBOX PROTEIN 2); DNA binding / protein homodimerization/
sequence-specific DNA binding / transcription factor |
chr4:9449291-9450604 FORWARD
Length = 285
Score = 69 bits (168), Expect = 4e-013
Identities = 33/43 (76%), Positives = 39/43 (90%)
Frame = -3
Query: 130 SDDDENGSTRKKLRLSKDQSAFLEESFKEHSTLNPKQKIALAK 2
SDD++ ++RKKLRLSKDQSA LEE+FK+HSTLNPKQK ALAK
Sbjct: 119 SDDEDGDNSRKKLRLSKDQSAILEETFKDHSTLNPKQKQALAK 161
>TAIR9_protein||AT2G44910.1 | Symbols: ATHB4, ATHB-4 | ATHB4 (ARABIDOPSIS
THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 4); DNA binding /
transcription factor | chr2:18517887-18519525 REVERSE
Length = 319
Score = 66 bits (160), Expect = 3e-012
Identities = 33/46 (71%), Positives = 40/46 (86%), Gaps = 3/46 (6%)
Frame = -3
Query: 130 SDDDENGS---TRKKLRLSKDQSAFLEESFKEHSTLNPKQKIALAK 2
SDD++ G+ +RKKLRLSKDQ+ LEE+FKEHSTLNPKQK+ALAK
Sbjct: 150 SDDEDGGNGDGSRKKLRLSKDQALVLEETFKEHSTLNPKQKLALAK 195
>TAIR9_protein||AT4G17460.1 | Symbols: HAT1 | HAT1; DNA binding / transcription
factor | chr4:9739862-9740983 FORWARD
Length = 283
Score = 64 bits (155), Expect = 1e-011
Identities = 32/43 (74%), Positives = 38/43 (88%), Gaps = 1/43 (2%)
Frame = -3
Query: 127 DDDENGST-RKKLRLSKDQSAFLEESFKEHSTLNPKQKIALAK 2
++D G T RKKLRLSKDQSA LE++FKEH+TLNPKQK+ALAK
Sbjct: 125 EEDYGGETCRKKLRLSKDQSAVLEDTFKEHNTLNPKQKLALAK 167
>TAIR9_protein||AT3G60390.1 | Symbols: HAT3 | HAT3 (HOMEOBOX-LEUCINE ZIPPER
PROTEIN 3); transcription factor | chr3:22320788-22322370 REVERSE
Length = 316
Score = 62 bits (150), Expect = 5e-011
Identities = 32/46 (69%), Positives = 39/46 (84%), Gaps = 4/46 (8%)
Frame = -3
Query: 127 DDDENG----STRKKLRLSKDQSAFLEESFKEHSTLNPKQKIALAK 2
D+D +G S+RKKLRLSK+Q+ LEE+FKEHSTLNPKQK+ALAK
Sbjct: 149 DEDGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNPKQKMALAK 194
>TAIR9_protein||AT2G22800.1 | Symbols: HAT9 | HAT9; DNA binding / transcription
factor | chr2:9704949-9706048 REVERSE
Length = 275
Score = 62 bits (149), Expect = 7e-011
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = -3
Query: 127 DDDENGSTRKKLRLSKDQSAFLEESFKEHSTLNPKQKIALAK 2
+D+E S RKKLRL+K QSA LEESFK+HSTLNPKQK LA+
Sbjct: 104 EDEEGISARKKLRLTKQQSALLEESFKDHSTLNPKQKQVLAR 145
>TAIR9_protein||AT4G37790.1 | Symbols: HAT22 | HAT22; transcription factor |
chr4:17768241-17769272 FORWARD
Length = 279
Score = 61 bits (147), Expect = 1e-010
Identities = 30/42 (71%), Positives = 35/42 (83%)
Frame = -3
Query: 127 DDDENGSTRKKLRLSKDQSAFLEESFKEHSTLNPKQKIALAK 2
DD+E S RKKLRL+K QSA LE++FK HSTLNPKQK ALA+
Sbjct: 117 DDEEGVSARKKLRLTKQQSALLEDNFKLHSTLNPKQKQALAR 158
>TAIR9_protein||AT2G01430.1 | Symbols: ATHB17, ATHB-17 | ATHB17 (ARABIDOPSIS
THALIANA HOMEOBOX-LEUCINE ZIPPER PROTEIN 17); transcription factor |
chr2:187798-190369 REVERSE
Length = 276
Score = 53 bits (125), Expect = 4e-008
Identities = 25/43 (58%), Positives = 33/43 (76%)
Frame = -3
Query: 130 SDDDENGSTRKKLRLSKDQSAFLEESFKEHSTLNPKQKIALAK 2
S DD + RKKLRL+++QS LE+SF+++ TLNPKQK LAK
Sbjct: 129 SHDDGSAPPRKKLRLTREQSRLLEDSFRQNHTLNPKQKEVLAK 171
>TAIR9_protein||AT1G70920.1 | Symbols: ATHB18 | ATHB18 (Arabidopsis thaliana
homeobox-leucine zipper protein 18); DNA binding / transcription factor
| chr1:26736126-26738419 FORWARD
Length = 207
Score = 48 bits (112), Expect = 1e-006
Identities = 26/44 (59%), Positives = 32/44 (72%), Gaps = 2/44 (4%)
Frame = -3
Query: 130 SDDDEN--GSTRKKLRLSKDQSAFLEESFKEHSTLNPKQKIALA 5
++DD N G RKKLRL+K+QS LEESF ++ TL PKQK LA
Sbjct: 57 NEDDSNSGGRRRKKLRLTKEQSHLLEESFIQNHTLTPKQKKDLA 100
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,893,016,647
Number of Sequences: 33410
Number of Extensions: 4893016647
Number of Successful Extensions: 259244453
Number of sequences better than 0.0: 0
|