BLASTX 7.6.2
Query= RU32966 /QuerySize=255
(254 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SC... 96 4e-021
TAIR9_protein||AT2G37650.1 | Symbols: | scarecrow-like transcri... 92 5e-020
TAIR9_protein||AT2G29060.1 | Symbols: | scarecrow transcription... 91 1e-019
TAIR9_protein||AT1G07520.1 | Symbols: | scarecrow transcription... 90 3e-019
TAIR9_protein||AT3G46600.1 | Symbols: | scarecrow transcription... 60 2e-010
TAIR9_protein||AT3G46600.2 | Symbols: | scarecrow transcription... 60 2e-010
TAIR9_protein||AT3G46600.3 | Symbols: | scarecrow transcription... 60 2e-010
TAIR9_protein||AT5G59450.1 | Symbols: | scarecrow-like transcri... 59 5e-010
>TAIR9_protein||AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCL14
(SCARECROW-LIKE 14); transcription factor | chr1:2313828-2316137
REVERSE
Length = 770
Score = 96 bits (237), Expect = 4e-021
Identities = 44/84 (52%), Positives = 61/84 (72%), Gaps = 2/84 (2%)
Frame = +3
Query: 3 STELLKQIRQHSSPFGDGSQRLAHFFANGLEARMAGTGTGNQFYYISVASKQKAVDKLKC 182
+ E+L+QIR+HSSP G+GS+RLAH+FAN LEAR+AGTGT Q Y + K A D LK
Sbjct: 412 ANEMLRQIREHSSPLGNGSERLAHYFANSLEARLAGTGT--QIYTALSSKKTSAADMLKA 469
Query: 183 YQVHLSACPFKRMSMFFKNKMILK 254
YQ ++S CPFK+ ++ F N +++
Sbjct: 470 YQTYMSVCPFKKAAIIFANHSMMR 493
>TAIR9_protein||AT2G37650.1 | Symbols: | scarecrow-like transcription factor 9
(SCL9) | chr2:15792623-15794779 FORWARD
Length = 719
Score = 92 bits (227), Expect = 5e-020
Identities = 46/80 (57%), Positives = 59/80 (73%), Gaps = 2/80 (2%)
Frame = +3
Query: 9 ELLKQIRQHSSPFGDGSQRLAHFFANGLEARMAGTGTGNQFYYISVASKQKAVDKLKCYQ 188
+LLKQIR HS+PFGDG+QRLAH FANGLEAR+A GTG+Q Y V+ + A LK +Q
Sbjct: 365 QLLKQIRLHSTPFGDGNQRLAHCFANGLEARLA--GTGSQIYKGIVSKPRSAAAVLKAHQ 422
Query: 189 VHLSACPFKRMSMFFKNKMI 248
+ L+ CPF+++S F NK I
Sbjct: 423 LFLACCPFRKLSYFITNKTI 442
>TAIR9_protein||AT2G29060.1 | Symbols: | scarecrow transcription factor family
protein | chr2:12481991-12486941 FORWARD
Length = 1337
Score = 91 bits (224), Expect = 1e-019
Identities = 43/82 (52%), Positives = 58/82 (70%), Gaps = 2/82 (2%)
Frame = +3
Query: 9 ELLKQIRQHSSPFGDGSQRLAHFFANGLEARMAGTGTGNQFYYISVASKQKAVDKLKCYQ 188
ELL +IRQHSS +GDG++RLAH+FAN LEAR+AG GT Q Y + K D LK YQ
Sbjct: 339 ELLSRIRQHSSSYGDGTERLAHYFANSLEARLAGIGT--QVYTALSSKKTSTSDMLKAYQ 396
Query: 189 VHLSACPFKRMSMFFKNKMILK 254
++S CPFK++++ F N I++
Sbjct: 397 TYISVCPFKKIAIIFANHSIMR 418
Score = 74 bits (181), Expect = 1e-014
Identities = 43/83 (51%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +3
Query: 9 ELLKQIRQHSSPFGDGSQRLAHFFANGLEARMAG-TGTGNQFYYISVAS--KQKAVDKLK 179
E L QIRQ SSP GD QRLAH FAN LEAR+ G TG Q YY ++ S K A D ++
Sbjct: 976 EFLLQIRQQSSPLGDAGQRLAHCFANALEARLQGSTGPMIQTYYNALTSSLKDTAADTIR 1035
Query: 180 CYQVHLSACPFKRMSMFFKNKMI 248
Y+V+LS+ PF + FF MI
Sbjct: 1036 AYRVYLSSSPFVTLMYFFSIWMI 1058
>TAIR9_protein||AT1G07520.1 | Symbols: | scarecrow transcription factor family
protein | chr1:2309718-2311805 REVERSE
Length = 696
Score = 90 bits (221), Expect = 3e-019
Identities = 50/83 (60%), Positives = 59/83 (71%), Gaps = 2/83 (2%)
Frame = +3
Query: 9 ELLKQIRQHSSPFGDGSQRLAHFFANGLEARMAG-TGTGNQFYYISVASKQK-AVDKLKC 182
+LL+QIR+ SP GD SQRLAHFFAN LEAR+ G TGT Q YY S++SK++ A LK
Sbjct: 336 DLLRQIRKQCSPVGDASQRLAHFFANALEARLEGSTGTMIQSYYDSISSKKRTAAQILKS 395
Query: 183 YQVHLSACPFKRMSMFFKNKMIL 251
Y V LSA PF + FF NKMIL
Sbjct: 396 YSVFLSASPFMTLIYFFSNKMIL 418
>TAIR9_protein||AT3G46600.1 | Symbols: | scarecrow transcription factor family
protein | chr3:17158048-17159799 FORWARD
Length = 584
Score = 60 bits (144), Expect = 2e-010
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +3
Query: 9 ELLKQIRQHSSPFGDGSQRLAHFFANGLEARMAGTGTGNQFYYISVASKQKAVDKLKCYQ 188
E LK+IR+HSS GD +QRL + FA LEAR+ GT T + +S+ VD LK Y+
Sbjct: 230 EKLKEIREHSSRHGDATQRLGYHFAEALEARITGTMTTP---ISATSSRTSMVDILKAYK 286
Query: 189 VHLSACPFKRMSMFFKNKMI 248
+ ACP M F N+ I
Sbjct: 287 GFVQACPTLIMCYFTANRTI 306
>TAIR9_protein||AT3G46600.2 | Symbols: | scarecrow transcription factor family
protein | chr3:17158379-17159799 FORWARD
Length = 454
Score = 60 bits (144), Expect = 2e-010
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +3
Query: 9 ELLKQIRQHSSPFGDGSQRLAHFFANGLEARMAGTGTGNQFYYISVASKQKAVDKLKCYQ 188
E LK+IR+HSS GD +QRL + FA LEAR+ GT T + +S+ VD LK Y+
Sbjct: 100 EKLKEIREHSSRHGDATQRLGYHFAEALEARITGTMTTP---ISATSSRTSMVDILKAYK 156
Query: 189 VHLSACPFKRMSMFFKNKMI 248
+ ACP M F N+ I
Sbjct: 157 GFVQACPTLIMCYFTANRTI 176
>TAIR9_protein||AT3G46600.3 | Symbols: | scarecrow transcription factor family
protein | chr3:17158052-17159799 FORWARD
Length = 552
Score = 60 bits (144), Expect = 2e-010
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Frame = +3
Query: 9 ELLKQIRQHSSPFGDGSQRLAHFFANGLEARMAGTGTGNQFYYISVASKQKAVDKLKCYQ 188
E LK+IR+HSS GD +QRL + FA LEAR+ GT T + +S+ VD LK Y+
Sbjct: 198 EKLKEIREHSSRHGDATQRLGYHFAEALEARITGTMTTP---ISATSSRTSMVDILKAYK 254
Query: 189 VHLSACPFKRMSMFFKNKMI 248
+ ACP M F N+ I
Sbjct: 255 GFVQACPTLIMCYFTANRTI 274
>TAIR9_protein||AT5G59450.1 | Symbols: | scarecrow-like transcription factor 11
(SCL11) | chr5:23974808-23976640 FORWARD
Length = 611
Score = 59 bits (141), Expect = 5e-010
Identities = 36/85 (42%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Frame = +3
Query: 3 STELLKQIRQHSSPFGDGSQRLAHFFANGLEARMAGT---GTGNQFYYISVASKQKAVDK 173
+T+ LK+IR HSS GDG+QRLA +FA LEAR+ G N F +S VD
Sbjct: 243 ATDKLKEIRAHSSSNGDGTQRLAFYFAEALEARITGNISPPVSNPF----PSSTTSMVDI 298
Query: 174 LKCYQVHLSACPFKRMSMFFKNKMI 248
LK Y++ + CP F NK I
Sbjct: 299 LKAYKLFVHTCPIYVTDYFAANKSI 323
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,065,972,084
Number of Sequences: 33410
Number of Extensions: 5065972084
Number of Successful Extensions: 269508837
Number of sequences better than 0.0: 0
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