BLASTX 7.6.2
Query= RU33917 /QuerySize=266
(265 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G32230.1 | Symbols: | pentatricopeptide (PPR)... 146 3e-036
TAIR9_protein||AT2G16650.1 | Symbols: | antiporter/ drug transp... 84 1e-017
TAIR9_protein||AT2G01740.1 | Symbols: | pentatricopeptide (PPR)... 53 3e-008
TAIR9_protein||AT2G39230.1 | Symbols: | pentatricopeptide (PPR)... 48 1e-006
TAIR9_protein||AT5G55840.1 | Symbols: | pentatricopeptide (PPR)... 47 1e-006
>TAIR9_protein||AT2G32230.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:13679608-13681756 REVERSE
Length = 573
Score = 146 bits (367), Expect = 3e-036
Identities = 68/88 (77%), Positives = 78/88 (88%)
Frame = -2
Query: 264 GFEIFRQMVEDKVVPNEATFTNAARLSAAAADPEMAFSLVKQMKGFGIPPKLRSYGPALF 85
GF+IF+QM+ DKVVPNEATFTN ARL+ A DPEMAF +VKQMK FGI P+LRSYGPALF
Sbjct: 160 GFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALF 219
Query: 84 GFCKKGEAERAYEVDAHMVESGVVAEEP 1
GFC+KG+A++AYEVDAHMVES VV EEP
Sbjct: 220 GFCRKGDADKAYEVDAHMVESEVVPEEP 247
>TAIR9_protein||AT2G16650.1 | Symbols: | antiporter/ drug transporter |
chr2:7215937-7218061 REVERSE
Length = 529
Score = 84 bits (207), Expect = 1e-017
Identities = 43/89 (48%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Frame = -2
Query: 264 GFEIFRQMVEDKVVPNEATFTNAARLSAAAADPEMAFSLVKQMKGFG--IPPKLRSYGPA 91
GFEIF +MV + PNEA+ T+ ARL+AA + + AF +VK+ G P+LR+Y PA
Sbjct: 93 GFEIFDRMVSSGISPNEASVTSVARLAAAKGNGDYAFKVVKEFVSVGGVSIPRLRTYAPA 152
Query: 90 LFGFCKKGEAERAYEVDAHMVESGVVAEE 4
L FC+K EAE+ YEV+ HM +G+ EE
Sbjct: 153 LLCFCEKLEAEKGYEVEEHMEAAGIALEE 181
>TAIR9_protein||AT2G01740.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:326136-327815 REVERSE
Length = 560
Score = 53 bits (126), Expect = 3e-008
Identities = 31/79 (39%), Positives = 42/79 (53%)
Frame = -2
Query: 252 FRQMVEDKVVPNEATFTNAARLSAAAADPEMAFSLVKQMKGFGIPPKLRSYGPALFGFCK 73
F M D + PN TFT A D E+A SL K+M+ + + +Y + GFCK
Sbjct: 186 FHSMKRDALSPNVVTFTCLIDGYCKAGDLEVAVSLYKEMRRVRMSLNVVTYTALIDGFCK 245
Query: 72 KGEAERAYEVDAHMVESGV 16
KGE +RA E+ + MVE V
Sbjct: 246 KGEMQRAEEMYSRMVEDRV 264
>TAIR9_protein||AT2G39230.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr2:16381647-16384250 FORWARD
Length = 868
Score = 48 bits (112), Expect = 1e-006
Identities = 24/82 (29%), Positives = 43/82 (52%)
Frame = -2
Query: 258 EIFRQMVEDKVVPNEATFTNAARLSAAAADPEMAFSLVKQMKGFGIPPKLRSYGPALFGF 79
E +R+M E+ PN TFT+ + ++A + +MK + L +YG + GF
Sbjct: 611 ETYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGF 670
Query: 78 CKKGEAERAYEVDAHMVESGVV 13
CKK + + AY + + + E G++
Sbjct: 671 CKKNDMKTAYTLFSELPELGLM 692
>TAIR9_protein||AT5G55840.1 | Symbols: | pentatricopeptide (PPR)
repeat-containing protein | chr5:22598398-22602499 FORWARD
Length = 1275
Score = 47 bits (111), Expect = 1e-006
Identities = 25/85 (29%), Positives = 44/85 (51%)
Frame = -2
Query: 261 FEIFRQMVEDKVVPNEATFTNAARLSAAAADPEMAFSLVKQMKGFGIPPKLRSYGPALFG 82
+ ++M++ K+ P+ ATF + A E + L+++M+ G P + +Y L
Sbjct: 178 WSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHW 237
Query: 81 FCKKGEAERAYEVDAHMVESGVVAE 7
+CKKG + A E+ HM GV A+
Sbjct: 238 YCKKGRFKAAIELLDHMKSKGVDAD 262
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,123,143,051
Number of Sequences: 33410
Number of Extensions: 5123143051
Number of Successful Extensions: 274612372
Number of sequences better than 0.0: 0
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