BLASTX 7.6.2
Query= RU34912 /QuerySize=162
(161 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a... 72 5e-014
TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a... 72 5e-014
TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-l... 70 2e-013
TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-L... 70 2e-013
TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription... 68 1e-012
TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIK... 59 4e-010
TAIR9_protein||AT5G52510.1 | Symbols: | scarecrow-like transcri... 56 5e-009
>TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 72 bits (176), Expect = 5e-014
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +2
Query: 44 HHMPDESVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTN 160
HHMPDESVS +N RDRLLR+VKSLSPKVVTLVEQESNTN
Sbjct: 328 HHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTN 366
>TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 72 bits (176), Expect = 5e-014
Identities = 35/39 (89%), Positives = 37/39 (94%)
Frame = +2
Query: 44 HHMPDESVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTN 160
HHMPDESVS +N RDRLLR+VKSLSPKVVTLVEQESNTN
Sbjct: 328 HHMPDESVSTENHRDRLLRMVKSLSPKVVTLVEQESNTN 366
>TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-like 13);
transcription factor | chr4:9661218-9662807 REVERSE
Length = 530
Score = 70 bits (171), Expect = 2e-013
Identities = 32/39 (82%), Positives = 37/39 (94%)
Frame = +2
Query: 44 HHMPDESVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTN 160
HHMPDESVS++N RDRLL ++KSLSPK+VTLVEQESNTN
Sbjct: 363 HHMPDESVSVENHRDRLLHLIKSLSPKLVTLVEQESNTN 401
>TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21);
transcription factor | chr2:1720575-1721816 REVERSE
Length = 414
Score = 70 bits (170), Expect = 2e-013
Identities = 33/39 (84%), Positives = 37/39 (94%)
Frame = +2
Query: 44 HHMPDESVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTN 160
HH+PDESVS++N RDRLLR+VKSLSPKVVTLVEQE NTN
Sbjct: 251 HHLPDESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTN 289
>TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor |
chr1:18737398-18739547 REVERSE
Length = 598
Score = 68 bits (164), Expect = 1e-012
Identities = 31/39 (79%), Positives = 36/39 (92%)
Frame = +2
Query: 44 HHMPDESVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTN 160
HHMPDESV+++N RDRLLR+VK LSP VVTLVEQE+NTN
Sbjct: 435 HHMPDESVTVENHRDRLLRLVKHLSPNVVTLVEQEANTN 473
>TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1);
transcription factor | chr1:7509721-7511502 FORWARD
Length = 594
Score = 59 bits (142), Expect = 4e-010
Identities = 27/39 (69%), Positives = 33/39 (84%)
Frame = +2
Query: 44 HHMPDESVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTN 160
HHMPDESV+ N RD LL +VKSL+PK+VT+VEQ+ NTN
Sbjct: 430 HHMPDESVTTVNQRDELLHMVKSLNPKLVTVVEQDVNTN 468
>TAIR9_protein||AT5G52510.1 | Symbols: | scarecrow-like transcription factor 8
(SCL8) | chr5:21307196-21309118 FORWARD
Length = 641
Score = 56 bits (133), Expect = 5e-009
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2
Query: 44 HHMPDESVSIQNPRDRLLRVVKSLSPKVVTLVEQESNTN 160
+ +PDESV +NPRD LLR VK L P+VVTLVEQE N+N
Sbjct: 479 YRVPDESVCTENPRDELLRRVKGLKPRVVTLVEQEMNSN 517
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,239,339,544
Number of Sequences: 33410
Number of Extensions: 5239339544
Number of Successful Extensions: 280848791
Number of sequences better than 0.0: 0
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