BLASTX 7.6.2
Query= RU34936 /QuerySize=165
(164 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G77250.1 | Symbols: | PHD finger family prote... 90 3e-019
TAIR9_protein||AT5G44800.1 | Symbols: CHR4 | CHR4 (CHROMATIN REM... 49 7e-007
TAIR9_protein||AT3G14980.1 | Symbols: | PHD finger transcriptio... 47 2e-006
>TAIR9_protein||AT1G77250.1 | Symbols: | PHD finger family protein |
chr1:29020444-29022938 REVERSE
Length = 523
Score = 90 bits (221), Expect = 3e-019
Identities = 35/54 (64%), Positives = 40/54 (74%)
Frame = -2
Query: 163 CRHCGDKANGSDCLVCDSCEEMYHVSCIQPAVKGIPTKSWYCASCTACGIASPH 2
C+ CG+KA DCL CD CE+MYHVSC QP KG+PT SWYC CT+ GI SPH
Sbjct: 243 CKLCGEKAEARDCLACDHCEDMYHVSCAQPGGKGMPTHSWYCLDCTSKGIGSPH 296
>TAIR9_protein||AT5G44800.1 | Symbols: CHR4 | CHR4 (CHROMATIN REMODELING 4); ATP
binding / DNA binding / chromatin binding / helicase/ nucleic acid
binding / protein binding / zinc ion binding | chr5:18083659-18092162
REVERSE
Length = 2243
Score = 49 bits (114), Expect = 7e-007
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -2
Query: 136 GSDCLVCDSCEEMYHVSCIQPAVKGIPTKSWYCASCT 26
G D L CDSC YH +C+ P +K IP W C C+
Sbjct: 84 GGDLLCCDSCPRTYHTACLNPPLKRIPNGKWICPKCS 120
>TAIR9_protein||AT3G14980.1 | Symbols: | PHD finger transcription factor,
putative | chr3:5039931-5044811 REVERSE
Length = 1190
Score = 47 bits (110), Expect = 2e-006
Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Frame = -2
Query: 163 CRHCGDKANGSDCLVCDSCEEMYHVSCIQPAVKGIPTKSWYCASCTACGIAS 8
C CGD G + + CD+C +H +C+ V +P SWYC+SCT C I S
Sbjct: 729 CGVCGD---GGELICCDNCPSTFHQACLSMQV--LPEGSWYCSSCT-CWICS 774
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,239,339,544
Number of Sequences: 33410
Number of Extensions: 5239339544
Number of Successful Extensions: 280848791
Number of sequences better than 0.0: 0
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