BLASTX 7.6.2
Query= RU36031 /QuerySize=238
(237 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G21150.1 | Symbols: | mitochondrial transcrip... 62 8e-011
TAIR9_protein||AT5G07900.1 | Symbols: | mitochondrial transcrip... 60 2e-010
TAIR9_protein||AT1G61990.1 | Symbols: | mitochondrial transcrip... 53 3e-008
TAIR9_protein||AT5G23930.1 | Symbols: | mitochondrial transcrip... 53 3e-008
TAIR9_protein||AT1G62010.1 | Symbols: | mitochondrial transcrip... 53 4e-008
TAIR9_protein||AT1G61960.1 | Symbols: | mitochondrial transcrip... 50 3e-007
TAIR9_protein||AT1G61970.1 | Symbols: | mitochondrial transcrip... 48 9e-007
TAIR9_protein||AT1G62120.1 | Symbols: | mitochondrial transcrip... 48 1e-006
TAIR9_protein||AT1G62085.1 | Symbols: | mitochondrial transcrip... 48 1e-006
TAIR9_protein||AT3G46950.1 | Symbols: | mitochondrial transcrip... 45 8e-006
>TAIR9_protein||AT1G21150.1 | Symbols: | mitochondrial transcription
termination factor family protein / mTERF family protein |
chr1:7406406-7407578 REVERSE
Length = 391
Score = 62 bits (148), Expect = 8e-011
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Frame = -1
Query: 237 IEFLVNKNRVGQPAEVADRPDILTHSLEKSIIPRCSVIRVLQYKGLMKKGELSQATMLIN 58
+E+LVN N Q ++ RP +L+ S+EK I PR VI +L KGL+KK +++ T+L
Sbjct: 304 LEYLVN-NIGLQARDIVARPVVLSLSMEKRIKPRNQVISLLLSKGLVKKEDINYFTILKL 362
Query: 57 SRKRFLDRFVTKYQDQAPE 1
F+D+FV KYQD+ P+
Sbjct: 363 KSSEFMDKFVLKYQDEMPQ 381
>TAIR9_protein||AT5G07900.1 | Symbols: | mitochondrial transcription
termination factor family protein / mTERF family protein |
chr5:2520188-2521405 FORWARD
Length = 406
Score = 60 bits (145), Expect = 2e-010
Identities = 33/79 (41%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Frame = -1
Query: 237 IEFLVNKNRVGQPAEVADRPDILTHSLEKSIIPRCSVIRVLQYKGLMKKGELSQATMLIN 58
+E+ VN+ + P +A P +L SLEK IIPRCSV +VL GL+K+ + S ++L+
Sbjct: 318 MEYFVNEMNMA-PRSIAQCPVVLFFSLEKRIIPRCSVTKVLVSNGLVKE-DWSLTSLLVP 375
Query: 57 SRKRFLDRFVTKYQDQAPE 1
K FL++ V KY+++ PE
Sbjct: 376 VEKVFLEKLVIKYEEELPE 394
>TAIR9_protein||AT1G61990.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr1:22911453-22912697
FORWARD
Length = 415
Score = 53 bits (126), Expect = 3e-008
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 3/79 (3%)
Frame = -1
Query: 234 EFLVNKNRVGQPAEVADRPDILTHSLEKSIIPRCSVIRVLQYKGLMKKG-ELSQATMLIN 58
EFLV K + + A V P + +S+EK IIPRC+++ L KGL++KG EL + +++
Sbjct: 325 EFLVKKMKWPRNALVL-HPQVFGYSMEKRIIPRCNILEALLSKGLLRKGSELPAVSSVLS 383
Query: 57 -SRKRFLDRFVTKYQDQAP 4
+ + FLDR+V K+ + P
Sbjct: 384 CTDEGFLDRYVMKHNELVP 402
>TAIR9_protein||AT5G23930.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr5:8074625-8075998
REVERSE
Length = 458
Score = 53 bits (126), Expect = 3e-008
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 6/80 (7%)
Frame = -1
Query: 234 EFLVNKNRVGQPAE-VADRPDILTHSLEKSIIPRCSVIRVLQYKGLMKKGELSQATMLIN 58
EFLV +G P + VA P +L SLEK ++PRC+VI+ L GL+ GE+ + ++
Sbjct: 365 EFLV--KTMGWPLKVVASTPIVLGFSLEKFVLPRCNVIKALMSNGLI--GEMPAISSVLT 420
Query: 57 SRK-RFLDRFVTKYQDQAPE 1
S K +FL FV K+QD PE
Sbjct: 421 SPKLKFLKLFVEKHQDVLPE 440
>TAIR9_protein||AT1G62010.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr1:22915886-22917133
FORWARD
Length = 416
Score = 53 bits (125), Expect = 4e-008
Identities = 29/75 (38%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = -1
Query: 234 EFLVNKNRVGQPAEVADRPDILTHSLEKSIIPRCSVIRVLQYKGLMKKGELSQATMLINS 55
EFLV + A VA P +L +SLEK +PRC+VI+VL KGL++ +++L ++
Sbjct: 316 EFLVKEMNWPVKA-VASIPQVLGYSLEKRTVPRCNVIKVLMSKGLLESELPPMSSVLTST 374
Query: 54 RKRFLDRFVTKYQDQ 10
+ FL+ +V+K+ D+
Sbjct: 375 SESFLNLYVSKHDDK 389
>TAIR9_protein||AT1G61960.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr1:22902239-22903612
FORWARD
Length = 458
Score = 50 bits (117), Expect = 3e-007
Identities = 30/79 (37%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Frame = -1
Query: 234 EFLVNKNRVGQPAEVADRPDILTHSLEKSIIPRCSVIRVLQYKGLMKKGELS--QATMLI 61
EF+V KN + P + +SLEK +PRC+VI+ L KGLMK G + +++L
Sbjct: 368 EFIV-KNMNWPLEALVSIPQVFGYSLEKRTVPRCNVIKTLISKGLMKDGSEAPPMSSVLT 426
Query: 60 NSRKRFLDRFVTKYQDQAP 4
++ + FL R+V K+ AP
Sbjct: 427 STDQAFLRRYVMKHDKLAP 445
>TAIR9_protein||AT1G61970.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr1:22904713-22905969
FORWARD
Length = 419
Score = 48 bits (113), Expect = 9e-007
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
Frame = -1
Query: 234 EFLVNKNRVGQPAEVADRPDILTHSLEKSIIPRCSVIRVLQYKGLMKKGELSQATMLINS 55
EFLV K A V P + +SLEK I+PR +VI+ L KGLM+ S + +L+ +
Sbjct: 332 EFLVKKMNWPLKA-VVSNPAVFGYSLEKRIVPRGNVIKALMSKGLMRNELPSISCVLMCT 390
Query: 54 RKRFLDRFVTKYQDQ 10
++ FL+R+V + D+
Sbjct: 391 KQVFLNRYVANHVDK 405
>TAIR9_protein||AT1G62120.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr1:22960326-22961639
REVERSE
Length = 438
Score = 48 bits (112), Expect = 1e-006
Identities = 29/75 (38%), Positives = 46/75 (61%), Gaps = 1/75 (1%)
Frame = -1
Query: 234 EFLVNKNRVGQPAEVADRPDILTHSLEKSIIPRCSVIRVLQYKGLMKKGELSQATMLINS 55
EFLV + A VA P +L +SLEK +PRC+VI+VL KGL++ +++L ++
Sbjct: 338 EFLVTEMNWPLKA-VASIPQVLGYSLEKRTVPRCNVIKVLISKGLLESELPPISSVLTST 396
Query: 54 RKRFLDRFVTKYQDQ 10
+ FL +V K+ D+
Sbjct: 397 SEVFLYMYVRKHDDK 411
>TAIR9_protein||AT1G62085.1 | Symbols: | mitochondrial transcription
termination factor family protein / mTERF family protein |
chr1:22948757-22950142 REVERSE
Length = 462
Score = 48 bits (112), Expect = 1e-006
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Frame = -1
Query: 234 EFLVNKNRVGQPAEVADRPDILTHSLEKSIIPRCSVIRVLQYKGLMKKGELSQATMLINS 55
EFLV K A V P +L +SLEK IPRC+VI+ L KG + +++L+ +
Sbjct: 372 EFLVKKMNWPLKA-VVSTPAVLGYSLEKRTIPRCNVIKALMSKGSLGSELPGMSSVLVCT 430
Query: 54 RKRFLDRFVTKYQDQ 10
+ FL R+V + D+
Sbjct: 431 NEEFLCRYVKNHDDK 445
>TAIR9_protein||AT3G46950.1 | Symbols: | mitochondrial transcription
termination factor-related / mTERF-related | chr3:17289452-17290804
FORWARD
Length = 451
Score = 45 bits (105), Expect = 8e-006
Identities = 22/60 (36%), Positives = 37/60 (61%)
Frame = -1
Query: 180 PDILTHSLEKSIIPRCSVIRVLQYKGLMKKGELSQATMLINSRKRFLDRFVTKYQDQAPE 1
P +L +SLEK I+PR +VI+ L KGL+ +++L+ + + FL R+V K+ P+
Sbjct: 380 PTVLGYSLEKRIVPRSNVIKALMSKGLIGSENPPISSVLVCTDQEFLKRYVMKHDKLVPK 439
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,296,011,532
Number of Sequences: 33410
Number of Extensions: 5296011532
Number of Successful Extensions: 280976632
Number of sequences better than 0.0: 0
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