BLASTX 7.6.2
Query= RU36229 /QuerySize=254
(253 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G06400.1 | Symbols: CHR11 | CHR11 (CHROMATIN-R... 101 2e-022
TAIR9_protein||AT5G18620.1 | Symbols: CHR17 | CHR17 (CHROMATIN R... 98 8e-022
TAIR9_protein||AT5G18620.2 | Symbols: CHR17 | CHR17 (CHROMATIN R... 98 8e-022
TAIR9_protein||AT3G06010.1 | Symbols: ATCHR12 | ATCHR12; ATP bin... 69 4e-013
TAIR9_protein||AT5G19310.1 | Symbols: | homeotic gene regulator... 69 4e-013
TAIR9_protein||AT2G28290.2 | Symbols: SYD, CHR3 | SYD (SPLAYED);... 69 6e-013
TAIR9_protein||AT2G28290.1 | Symbols: SYD, CHR3 | SYD (SPLAYED);... 69 6e-013
TAIR9_protein||AT2G28290.3 | Symbols: SYD, CHR3 | SYD (SPLAYED);... 69 6e-013
TAIR9_protein||AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | t... 68 8e-013
TAIR9_protein||AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | t... 68 8e-013
TAIR9_protein||AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 (IN... 65 7e-012
TAIR9_protein||AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, S... 65 7e-012
TAIR9_protein||AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | PIE1 ... 62 5e-011
TAIR9_protein||AT2G13370.1 | Symbols: CHR5 | CHR5 (chromatin rem... 60 3e-010
TAIR9_protein||AT2G18760.1 | Symbols: CHR8 | CHR8 (chromatin rem... 55 1e-008
TAIR9_protein||AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | ETL1;... 52 5e-008
TAIR9_protein||AT1G03750.1 | Symbols: CHR9 | SWI2 (SWITCH 2); AT... 49 7e-007
TAIR9_protein||AT4G31900.1 | Symbols: | chromatin remodeling fa... 49 7e-007
TAIR9_protein||AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2... 48 9e-007
TAIR9_protein||AT5G63950.1 | Symbols: CHR24 | CHR24 (chromatin r... 46 3e-006
TAIR9_protein||AT2G44980.1 | Symbols: | transcription regulator... 45 8e-006
>TAIR9_protein||AT3G06400.1 | Symbols: CHR11 | CHR11 (CHROMATIN-REMODELING
PROTEIN 11); ATP binding / DNA binding / DNA-dependent ATPase/
helicase/ hydrolase, acting on acid anhydrides, in
phosphorus-containing anhydrides / nucleic acid binding / nucleosome
binding | chr3:1941066-1946700 FORWARD
Length = 1056
Score = 101 bits (249), Expect = 2e-022
Identities = 48/48 (100%)
Frame = -3
Query: 149 QPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
QPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL
Sbjct: 181 QPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 228
>TAIR9_protein||AT5G18620.1 | Symbols: CHR17 | CHR17 (CHROMATIN REMODELING
FACTOR17); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/
hydrolase, acting on acid anhydrides, in phosphorus-containing
anhydrides / nucleic acid binding / nucleosome binding |
chr5:6196190-6202058 REVERSE
Length = 1070
Score = 98 bits (243), Expect = 8e-022
Identities = 46/48 (95%), Positives = 48/48 (100%)
Frame = -3
Query: 149 QPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
QP+CIQGK+RDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL
Sbjct: 186 QPACIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 233
>TAIR9_protein||AT5G18620.2 | Symbols: CHR17 | CHR17 (CHROMATIN REMODELING
FACTOR17); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/
hydrolase, acting on acid anhydrides, in phosphorus-containing
anhydrides / nucleic acid binding / nucleosome binding |
chr5:6196190-6202058 REVERSE
Length = 1073
Score = 98 bits (243), Expect = 8e-022
Identities = 46/48 (95%), Positives = 48/48 (100%)
Frame = -3
Query: 149 QPSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
QP+CIQGK+RDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL
Sbjct: 186 QPACIQGKLRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 233
>TAIR9_protein||AT3G06010.1 | Symbols: ATCHR12 | ATCHR12; ATP binding / DNA
binding / helicase/ nucleic acid binding | chr3:1802435-1807284
REVERSE
Length = 1133
Score = 69 bits (168), Expect = 4e-013
Identities = 31/49 (63%), Positives = 41/49 (83%), Gaps = 1/49 (2%)
Frame = -3
Query: 149 QPSCIQ-GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
QPS ++ G++R YQL GL W++ L+ N +NGILADEMGLGKT+QTISL+
Sbjct: 424 QPSLLEGGELRSYQLEGLQWMVSLFNNNLNGILADEMGLGKTIQTISLI 472
>TAIR9_protein||AT5G19310.1 | Symbols: | homeotic gene regulator, putative |
chr5:6498906-6503432 FORWARD
Length = 1065
Score = 69 bits (168), Expect = 4e-013
Identities = 32/49 (65%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Frame = -3
Query: 149 QPSCIQ-GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
QPS +Q G++R YQL GL W++ LY N NGILADEMGLGKT+QTI+L+
Sbjct: 377 QPSLLQGGELRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALI 425
>TAIR9_protein||AT2G28290.2 | Symbols: SYD, CHR3 | SYD (SPLAYED); ATPase/
chromatin binding | chr2:12056771-12072950 FORWARD
Length = 3530
Score = 69 bits (166), Expect = 6e-013
Identities = 30/46 (65%), Positives = 38/46 (82%)
Frame = -3
Query: 143 SCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
S + GK+R+YQ+ GL WL+ LY N +NGILADEMGLGKT+Q ISL+
Sbjct: 748 SLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLI 793
>TAIR9_protein||AT2G28290.1 | Symbols: SYD, CHR3 | SYD (SPLAYED); ATPase/
chromatin binding | chr2:12056771-12072950 FORWARD
Length = 3575
Score = 69 bits (166), Expect = 6e-013
Identities = 30/46 (65%), Positives = 38/46 (82%)
Frame = -3
Query: 143 SCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
S + GK+R+YQ+ GL WL+ LY N +NGILADEMGLGKT+Q ISL+
Sbjct: 748 SLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLI 793
>TAIR9_protein||AT2G28290.3 | Symbols: SYD, CHR3 | SYD (SPLAYED); ATPase/
chromatin binding | chr2:12056771-12072950 FORWARD
Length = 3544
Score = 69 bits (166), Expect = 6e-013
Identities = 30/46 (65%), Positives = 38/46 (82%)
Frame = -3
Query: 143 SCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
S + GK+R+YQ+ GL WL+ LY N +NGILADEMGLGKT+Q ISL+
Sbjct: 748 SLVGGKLREYQMNGLRWLVSLYNNHLNGILADEMGLGKTVQVISLI 793
>TAIR9_protein||AT2G46020.2 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative | chr2:18923304-18931769 FORWARD
Length = 2194
Score = 68 bits (165), Expect = 8e-013
Identities = 31/49 (63%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Frame = -3
Query: 149 QPSCIQ-GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
QPS +Q G +RDYQL GL W++ LY N +NGILADEMGLGKT+Q ++L+
Sbjct: 972 QPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALI 1020
>TAIR9_protein||AT2G46020.1 | Symbols: CHR2, ATBRM, BRM, CHA2 | transcription
regulatory protein SNF2, putative | chr2:18923304-18931769 FORWARD
Length = 2193
Score = 68 bits (165), Expect = 8e-013
Identities = 31/49 (63%), Positives = 40/49 (81%), Gaps = 1/49 (2%)
Frame = -3
Query: 149 QPSCIQ-GKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
QPS +Q G +RDYQL GL W++ LY N +NGILADEMGLGKT+Q ++L+
Sbjct: 972 QPSMLQAGTLRDYQLVGLQWMLSLYNNKLNGILADEMGLGKTVQVMALI 1020
>TAIR9_protein||AT3G57300.1 | Symbols: INO80, ATINO80 | INO80 (INO80 ORTHOLOG);
ATP binding / DNA binding / helicase/ nucleic acid binding |
chr3:21199612-21207635 FORWARD
Length = 1508
Score = 65 bits (157), Expect = 7e-012
Identities = 26/47 (55%), Positives = 36/47 (76%)
Frame = -3
Query: 146 PSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
P +G +++YQ+ GL WL+ YE G+NGILADEMGLGKT+Q ++ L
Sbjct: 579 PELFKGTLKEYQMKGLQWLVNCYEQGLNGILADEMGLGKTIQAMAFL 625
>TAIR9_protein||AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1,
ATDDM1 | CHR1 (CHROMATIN REMODELING 1); ATPase/ helicase |
chr5:26649050-26652869 FORWARD
Length = 765
Score = 65 bits (157), Expect = 7e-012
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = -3
Query: 146 PSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
P G+++ YQL G+ WLI L++NG+NGILAD+MGLGKT+QTI L
Sbjct: 195 PLLTGGQLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFL 241
>TAIR9_protein||AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | PIE1
(PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding
/ helicase/ nucleic acid binding | chr3:4065636-4073992 FORWARD
Length = 2056
Score = 62 bits (150), Expect = 5e-011
Identities = 27/47 (57%), Positives = 37/47 (78%)
Frame = -3
Query: 146 PSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
P ++ +R+YQ GL+WL+ +YE +NGILADEMGLGKT+ TI+LL
Sbjct: 529 PFLLKHSLREYQHIGLDWLVTMYEKKLNGILADEMGLGKTIMTIALL 575
>TAIR9_protein||AT2G13370.1 | Symbols: CHR5 | CHR5 (chromatin remodeling 5); ATP
binding / DNA binding / chromatin binding / helicase/ nucleic acid
binding | chr2:5544601-5555543 REVERSE
Length = 1725
Score = 60 bits (143), Expect = 3e-010
Identities = 28/45 (62%), Positives = 36/45 (80%)
Frame = -3
Query: 137 IQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLG 3
I G +RDYQL GLN+L+ + N N ILADEMGLGKT+Q++S+LG
Sbjct: 621 IGGTLRDYQLEGLNFLVNSWLNDTNVILADEMGLGKTVQSVSMLG 665
>TAIR9_protein||AT2G18760.1 | Symbols: CHR8 | CHR8 (chromatin remodeling 8); ATP
binding / DNA binding / helicase/ nucleic acid binding |
chr2:8129154-8133502 FORWARD
Length = 1188
Score = 55 bits (130), Expect = 1e-008
Identities = 25/48 (52%), Positives = 31/48 (64%)
Frame = -3
Query: 146 PSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLLG 3
P CI K+ DYQ G+ WL L+ GI+ DEMGLGKT+Q +S LG
Sbjct: 378 PECIFRKLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLG 425
>TAIR9_protein||AT2G02090.1 | Symbols: CHR19, CHA19, ETL1 | ETL1; ATP binding /
DNA binding / helicase/ nucleic acid binding | chr2:523481-526884
FORWARD
Length = 764
Score = 52 bits (124), Expect = 5e-008
Identities = 27/49 (55%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Frame = -3
Query: 149 QPSCIQGKMRDYQLAGLNWLIRLYENGING-ILADEMGLGKTLQTISLL 6
+ S Q ++ YQL G+N+L+ LY+ GI G ILADEMGLGKT+Q I+ L
Sbjct: 205 EDSDFQPILKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYL 253
>TAIR9_protein||AT1G03750.1 | Symbols: CHR9 | SWI2 (SWITCH 2); ATP binding / DNA
binding / helicase/ nucleic acid binding | chr1:937920-941068 FORWARD
Length = 863
Score = 49 bits (114), Expect = 7e-007
Identities = 21/47 (44%), Positives = 33/47 (70%)
Frame = -3
Query: 146 PSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
P+ I ++ ++Q G+ ++ LY+N GIL D+MGLGKT+QTI+ L
Sbjct: 132 PASINCRLLEHQREGVKFMYNLYKNNHGGILGDDMGLGKTIQTIAFL 178
>TAIR9_protein||AT4G31900.1 | Symbols: | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD
Length = 1203
Score = 49 bits (114), Expect = 7e-007
Identities = 24/47 (51%), Positives = 31/47 (65%)
Frame = -3
Query: 146 PSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
P + G + YQL GLN+L + N ILADEMGLGKT+Q+I+ L
Sbjct: 218 PEFLTGTLHTYQLEGLNFLRYSWSKKTNVILADEMGLGKTIQSIAFL 264
>TAIR9_protein||AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | PKL
(PICKLE); ATPase/ DNA binding / DNA helicase | chr2:10714411-10723763
FORWARD
Length = 1385
Score = 48 bits (113), Expect = 9e-007
Identities = 24/47 (51%), Positives = 33/47 (70%)
Frame = -3
Query: 146 PSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
P ++G + YQL GLN+L + + ILADEMGLGKT+Q+I+LL
Sbjct: 266 PEFLKGLLHPYQLEGLNFLRFSWSKQTHVILADEMGLGKTIQSIALL 312
>TAIR9_protein||AT5G63950.1 | Symbols: CHR24 | CHR24 (chromatin remodeling 24);
ATP binding / DNA binding / helicase/ nucleic acid binding |
chr5:25592160-25598405 REVERSE
Length = 1091
Score = 46 bits (108), Expect = 3e-006
Identities = 23/47 (48%), Positives = 28/47 (59%)
Frame = -3
Query: 146 PSCIQGKMRDYQLAGLNWLIRLYENGINGILADEMGLGKTLQTISLL 6
P I + +Q GLNWL L+ G GIL D+MGLGKT+Q S L
Sbjct: 370 PGKIATMLYPHQREGLNWLWSLHTQGKGGILGDDMGLGKTMQICSFL 416
>TAIR9_protein||AT2G44980.1 | Symbols: | transcription regulatory protein SNF2,
putative | chr2:18552440-18556669 REVERSE
Length = 852
Score = 45 bits (105), Expect = 8e-006
Identities = 23/52 (44%), Positives = 34/52 (65%), Gaps = 5/52 (9%)
Frame = -3
Query: 146 PSC----IQGKMRDYQLAGLNWLIRLYENGINGIL-ADEMGLGKTLQTISLL 6
P C + ++ +Q+ G++WLI+ Y G+N +L D+MGLGKTLQ IS L
Sbjct: 40 PDCSEFGVTATLKPHQVEGVSWLIQKYLLGVNVVLELDQMGLGKTLQAISFL 91
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,324,370,947
Number of Sequences: 33410
Number of Extensions: 5324370947
Number of Successful Extensions: 281023678
Number of sequences better than 0.0: 0
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