BLASTX 7.6.2
Query= RU36600 /QuerySize=169
(168 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G63260.1 | Symbols: | zinc finger (CCCH-type)... 83 3e-017
TAIR9_protein||AT3G48440.1 | Symbols: | zinc finger (CCCH-type)... 74 1e-014
TAIR9_protein||AT3G02830.1 | Symbols: ZFN1 | ZFN1 (ZINC FINGER P... 53 4e-008
TAIR9_protein||AT5G16540.2 | Symbols: ZFN3 | ZFN3 (ZINC FINGER N... 51 1e-007
TAIR9_protein||AT5G16540.3 | Symbols: ZFN3 | ZFN3 (ZINC FINGER N... 51 1e-007
TAIR9_protein||AT5G16540.1 | Symbols: ZFN3 | ZFN3 (ZINC FINGER N... 51 1e-007
TAIR9_protein||AT3G12680.1 | Symbols: HUA1 | HUA1 (ENHANCER OF A... 50 3e-007
TAIR9_protein||AT2G47850.1 | Symbols: | zinc finger (CCCH-type)... 45 6e-006
TAIR9_protein||AT2G47850.2 | Symbols: | zinc finger (CCCH-type)... 45 6e-006
TAIR9_protein||AT2G47850.3 | Symbols: | zinc finger (CCCH-type)... 45 6e-006
TAIR9_protein||AT3G06410.1 | Symbols: | nucleic acid binding / ... 45 6e-006
>TAIR9_protein||AT5G63260.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr5:25361900-25364453 FORWARD
Length = 436
Score = 83 bits (204), Expect = 3e-017
Identities = 35/54 (64%), Positives = 46/54 (85%), Gaps = 1/54 (1%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPVRRKNNQVFKDKVKEKDEFSEKPSLTECKYYFR 6
CSFY++TG+CK+GS+CKFNHPVRRK Q+ +++V+E+DE E P L ECKYYFR
Sbjct: 107 CSFYMRTGSCKYGSSCKFNHPVRRK-LQIGRERVRERDEDVENPKLMECKYYFR 159
>TAIR9_protein||AT3G48440.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr3:17941402-17943576 FORWARD
Length = 449
Score = 74 bits (181), Expect = 1e-014
Identities = 31/54 (57%), Positives = 41/54 (75%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPVRRKNNQVFKDKVKEKDEFSEKPSLTECKYYFR 6
CSFY++TG+CKFGS+CKFNHP+ RK +KV+EK++ K L +CKYYFR
Sbjct: 116 CSFYMRTGSCKFGSSCKFNHPLARKFQIARDNKVREKEDDGGKLGLIDCKYYFR 169
>TAIR9_protein||AT3G02830.1 | Symbols: ZFN1 | ZFN1 (ZINC FINGER PROTEIN 1); DNA
binding / nuclease/ nucleic acid binding | chr3:614075-615916 FORWARD
Length = 398
Score = 53 bits (125), Expect = 4e-008
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 3/54 (5%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPVRRKNNQVFKDKVKEKDEFSEKPSLTECKYYFR 6
CS+Y++TG C+FGS C+FNHP ++ ++ + + E+ E+ EC+YY +
Sbjct: 46 CSYYIRTGLCRFGSTCRFNHP---RDRELVIATARMRGEYPERIGQPECEYYLK 96
>TAIR9_protein||AT5G16540.2 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding | chr5:5403437-5405034
FORWARD
Length = 369
Score = 51 bits (120), Expect = 1e-007
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPVRRKNNQVFKDKVKEKDEFSEKPSLTECKYYFR 6
C++Y++TG C+FGS C+FNHP RK + + K E+ E+ EC++Y +
Sbjct: 48 CAYYIRTGLCRFGSTCRFNHPHDRK---LVIATARIKGEYPERIGQPECEFYLK 98
>TAIR9_protein||AT5G16540.3 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding | chr5:5403598-5405034
FORWARD
Length = 355
Score = 51 bits (120), Expect = 1e-007
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPVRRKNNQVFKDKVKEKDEFSEKPSLTECKYYFR 6
C++Y++TG C+FGS C+FNHP RK + + K E+ E+ EC++Y +
Sbjct: 27 CAYYIRTGLCRFGSTCRFNHPHDRK---LVIATARIKGEYPERIGQPECEFYLK 77
Score = 45 bits (105), Expect = 8e-006
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPVRRKNNQVFKDKVKEKDEFSEKPSLTECKYYFRW 3
C FY+KTG+CKFG+ CKF+HP R+ D V +P C +Y R+
Sbjct: 228 CQFYMKTGDCKFGTVCKFHHPRDRQTPP--PDCVLSSVGLPLRPGEPLCVFYSRY 280
>TAIR9_protein||AT5G16540.1 | Symbols: ZFN3 | ZFN3 (ZINC FINGER NUCLEASE 3); DNA
binding / nuclease/ nucleic acid binding | chr5:5403437-5405034
FORWARD
Length = 376
Score = 51 bits (120), Expect = 1e-007
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPVRRKNNQVFKDKVKEKDEFSEKPSLTECKYYFR 6
C++Y++TG C+FGS C+FNHP RK + + K E+ E+ EC++Y +
Sbjct: 48 CAYYIRTGLCRFGSTCRFNHPHDRK---LVIATARIKGEYPERIGQPECEFYLK 98
Score = 45 bits (105), Expect = 8e-006
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPVRRKNNQVFKDKVKEKDEFSEKPSLTECKYYFRW 3
C FY+KTG+CKFG+ CKF+HP R+ D V +P C +Y R+
Sbjct: 249 CQFYMKTGDCKFGTVCKFHHPRDRQTPP--PDCVLSSVGLPLRPGEPLCVFYSRY 301
>TAIR9_protein||AT3G12680.1 | Symbols: HUA1 | HUA1 (ENHANCER OF AG-4 1); RNA
binding | chr3:4025276-4028999 REVERSE
Length = 525
Score = 50 bits (118), Expect = 3e-007
Identities = 23/54 (42%), Positives = 32/54 (59%), Gaps = 5/54 (9%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPVRRKNNQVFKDKVKEKDEFSEKPSLTECKYYFR 6
C +Y+KT CK+GS CKFNHP R+ V V+ +D E+PS C +Y +
Sbjct: 231 CPYYIKTQRCKYGSKCKFNHP--REEAAV---SVETQDSLPERPSEPMCTFYMK 279
>TAIR9_protein||AT2G47850.1 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:19595953-19598119 FORWARD
Length = 469
Score = 45 bits (106), Expect = 6e-006
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHP 105
C FYLKTG CKFG++CKF+HP
Sbjct: 96 CQFYLKTGTCKFGASCKFHHP 116
>TAIR9_protein||AT2G47850.2 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:19595953-19598119 FORWARD
Length = 443
Score = 45 bits (106), Expect = 6e-006
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHP 105
C FYLKTG CKFG++CKF+HP
Sbjct: 96 CQFYLKTGTCKFGASCKFHHP 116
>TAIR9_protein||AT2G47850.3 | Symbols: | zinc finger (CCCH-type) family protein
| chr2:19595953-19598119 FORWARD
Length = 469
Score = 45 bits (106), Expect = 6e-006
Identities = 16/21 (76%), Positives = 19/21 (90%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHP 105
C FYLKTG CKFG++CKF+HP
Sbjct: 96 CQFYLKTGTCKFGASCKFHHP 116
>TAIR9_protein||AT3G06410.1 | Symbols: | nucleic acid binding / zinc ion
binding | chr3:1947471-1949528 REVERSE
Length = 463
Score = 45 bits (106), Expect = 6e-006
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = -2
Query: 167 CSFYLKTGNCKFGSNCKFNHPV 102
CS+YL+TG CKFG C+FNHPV
Sbjct: 154 CSYYLRTGQCKFGLTCRFNHPV 175
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,324,370,947
Number of Sequences: 33410
Number of Extensions: 5324370947
Number of Successful Extensions: 281023678
Number of sequences better than 0.0: 0
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