BLASTX 7.6.2
Query= RU36815 /QuerySize=188
(187 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-l... 104 2e-023
TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a... 92 4e-020
TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a... 92 4e-020
TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-L... 87 2e-018
TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription... 79 5e-016
TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIK... 75 7e-015
TAIR9_protein||AT5G52510.1 | Symbols: | scarecrow-like transcri... 53 4e-008
TAIR9_protein||AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE... 52 5e-008
TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROT... 49 6e-007
TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSO... 49 7e-007
TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELL... 48 9e-007
TAIR9_protein||AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); ... 48 9e-007
TAIR9_protein||AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW... 47 2e-006
TAIR9_protein||AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transc... 47 3e-006
TAIR9_protein||AT5G41920.1 | Symbols: | scarecrow transcription... 45 8e-006
>TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-like 13);
transcription factor | chr4:9661218-9662807 REVERSE
Length = 530
Score = 104 bits (257), Expect = 2e-023
Identities = 50/61 (81%), Positives = 55/61 (90%)
Frame = +2
Query: 5 LVKSLSPKVMTLVEQESNTNTSSFYSRFVESVDYYTAMFESIDAGCPRDDTQRISAEMHC 184
L+KSLSPK++TLVEQESNTNTS F SRFVE++DYYTAMFESIDA PRDD QRISAE HC
Sbjct: 382 LIKSLSPKLVTLVEQESNTNTSPFLSRFVETLDYYTAMFESIDAARPRDDKQRISAEQHC 441
Query: 185 V 187
V
Sbjct: 442 V 442
>TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 92 bits (228), Expect = 4e-020
Identities = 42/62 (67%), Positives = 53/62 (85%)
Frame = +2
Query: 2 RLVKSLSPKVMTLVEQESNTNTSSFYSRFVESVDYYTAMFESIDAGCPRDDTQRISAEMH 181
R+VKSLSPKV+TLVEQESNTNT++F+ RF+E+++YY AMFESID PRD QRI+ E H
Sbjct: 346 RMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQH 405
Query: 182 CV 187
C+
Sbjct: 406 CL 407
>TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 92 bits (228), Expect = 4e-020
Identities = 42/62 (67%), Positives = 53/62 (85%)
Frame = +2
Query: 2 RLVKSLSPKVMTLVEQESNTNTSSFYSRFVESVDYYTAMFESIDAGCPRDDTQRISAEMH 181
R+VKSLSPKV+TLVEQESNTNT++F+ RF+E+++YY AMFESID PRD QRI+ E H
Sbjct: 346 RMVKSLSPKVVTLVEQESNTNTAAFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQH 405
Query: 182 CV 187
C+
Sbjct: 406 CL 407
>TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21);
transcription factor | chr2:1720575-1721816 REVERSE
Length = 414
Score = 87 bits (214), Expect = 2e-018
Identities = 41/62 (66%), Positives = 50/62 (80%)
Frame = +2
Query: 2 RLVKSLSPKVMTLVEQESNTNTSSFYSRFVESVDYYTAMFESIDAGCPRDDTQRISAEMH 181
R+VKSLSPKV+TLVEQE NTNTS F RF+E++ YYTAMFESID PR+ +RI+ E H
Sbjct: 269 RMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQH 328
Query: 182 CV 187
C+
Sbjct: 329 CM 330
>TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor |
chr1:18737398-18739547 REVERSE
Length = 598
Score = 79 bits (193), Expect = 5e-016
Identities = 37/62 (59%), Positives = 48/62 (77%)
Frame = +2
Query: 2 RLVKSLSPKVMTLVEQESNTNTSSFYSRFVESVDYYTAMFESIDAGCPRDDTQRISAEMH 181
RLVK LSP V+TLVEQE+NTNT+ F RFVE++++Y A+FESID RD +RI+ E H
Sbjct: 453 RLVKHLSPNVVTLVEQEANTNTAPFLPRFVETMNHYLAVFESIDVKLARDHKERINVEQH 512
Query: 182 CV 187
C+
Sbjct: 513 CL 514
>TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1);
transcription factor | chr1:7509721-7511502 FORWARD
Length = 594
Score = 75 bits (183), Expect = 7e-015
Identities = 31/61 (50%), Positives = 49/61 (80%)
Frame = +2
Query: 5 LVKSLSPKVMTLVEQESNTNTSSFYSRFVESVDYYTAMFESIDAGCPRDDTQRISAEMHC 184
+VKSL+PK++T+VEQ+ NTNTS F+ RF+E+ +YY+A+FES+D PR+ +R++ E C
Sbjct: 449 MVKSLNPKLVTVVEQDVNTNTSPFFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQC 508
Query: 185 V 187
+
Sbjct: 509 L 509
>TAIR9_protein||AT5G52510.1 | Symbols: | scarecrow-like transcription factor 8
(SCL8) | chr5:21307196-21309118 FORWARD
Length = 641
Score = 53 bits (125), Expect = 4e-008
Identities = 26/58 (44%), Positives = 36/58 (62%)
Frame = +2
Query: 2 RLVKSLSPKVMTLVEQESNTNTSSFYSRFVESVDYYTAMFESIDAGCPRDDTQRISAE 175
R VK L P+V+TLVEQE N+NT+ F R ES Y A+ ES+++ P ++ R E
Sbjct: 497 RRVKGLKPRVVTLVEQEMNSNTAPFLGRVSESCACYGALLESVESTVPSTNSDRAKVE 554
>TAIR9_protein||AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE 1);
transcription factor | chr1:24748327-24749862 FORWARD
Length = 512
Score = 52 bits (124), Expect = 5e-008
Identities = 25/57 (43%), Positives = 41/57 (71%), Gaps = 3/57 (5%)
Frame = +2
Query: 8 VKSLSPKVMTLVEQESNTNTSSFYSRFVESVDYYTAMFESIDAGCPRDDTQRISAEM 178
+KS+ P +MT+VEQE+N N + F RF ES+ YY+++F+S++ G P D R+ +E+
Sbjct: 366 IKSIRPDIMTVVEQEANHNGTVFLDRFTESLHYYSSLFDSLE-GPPSQD--RVMSEL 419
>TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROTEIN 3);
transcription factor | chr5:5764316-5765887 REVERSE
Length = 524
Score = 49 bits (115), Expect = 6e-007
Identities = 21/58 (36%), Positives = 39/58 (67%)
Frame = +2
Query: 8 VKSLSPKVMTLVEQESNTNTSSFYSRFVESVDYYTAMFESIDAGCPRDDTQRISAEMH 181
VK++ P ++T+VEQE+N N F RF E++ YY+++F+S++ G R+ +E++
Sbjct: 373 VKAVKPGLVTVVEQEANHNGDVFLDRFNEALHYYSSLFDSLEDGVVIPSQDRVMSEVY 430
>TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSOR OF GA1-3 1);
protein binding / transcription factor | chr2:255581-257344 REVERSE
Length = 588
Score = 49 bits (114), Expect = 7e-007
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Frame = +2
Query: 5 LVKSLSPKVMTLVEQESNTNTSSFYSRFVESVDYYTAMFESIDAGCPRDDTQRIS 169
+VK + P + T+VEQESN N F RF ES+ YY+ +F+S++ G P + +S
Sbjct: 439 VVKQIKPVIFTVVEQESNHNGPVFLDRFTESLHYYSTLFDSLE-GVPNSQDKVMS 492
>TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELLIC ACID
INSENSITIVE); transcription factor | chr1:5149414-5151015 FORWARD
Length = 534
Score = 48 bits (113), Expect = 9e-007
Identities = 19/43 (44%), Positives = 31/43 (72%)
Frame = +2
Query: 5 LVKSLSPKVMTLVEQESNTNTSSFYSRFVESVDYYTAMFESID 133
+V + P++ T+VEQESN N+ F RF ES+ YY+ +F+S++
Sbjct: 387 VVNQIKPEIFTVVEQESNHNSPIFLDRFTESLHYYSTLFDSLE 429
>TAIR9_protein||AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); transcription
factor | chr3:819636-821279 REVERSE
Length = 548
Score = 48 bits (113), Expect = 9e-007
Identities = 20/58 (34%), Positives = 38/58 (65%)
Frame = +2
Query: 8 VKSLSPKVMTLVEQESNTNTSSFYSRFVESVDYYTAMFESIDAGCPRDDTQRISAEMH 181
VK++ P ++T+VEQE+N N F RF E++ YY+++F+S++ R+ +E++
Sbjct: 402 VKAIKPSIVTVVEQEANHNGIVFLDRFNEALHYYSSLFDSLEDSYSLPSQDRVMSEVY 459
>TAIR9_protein||AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW); protein
binding / protein homodimerization/ sequence-specific DNA binding /
transcription factor | chr3:20070550-20072625 FORWARD
Length = 654
Score = 47 bits (111), Expect = 2e-006
Identities = 22/53 (41%), Positives = 38/53 (71%), Gaps = 1/53 (1%)
Frame = +2
Query: 5 LVKSLSPKVMTLVEQESNTNTSSFYSRFVESVDYYTAMFESIDAGCPRDDTQR 163
L++ L+PKV+T+VEQ+ ++ SF RFVE++ YY+A+F+S+ A + +R
Sbjct: 508 LLQRLAPKVVTVVEQDL-SHAGSFLGRFVEAIHYYSALFDSLGASYGEESEER 559
>TAIR9_protein||AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transcription factor
| chr1:18678177-18679625 REVERSE
Length = 483
Score = 47 bits (109), Expect = 3e-006
Identities = 22/53 (41%), Positives = 32/53 (60%)
Frame = +2
Query: 17 LSPKVMTLVEQESNTNTSSFYSRFVESVDYYTAMFESIDAGCPRDDTQRISAE 175
LSPKVM + EQ+S+ N S+ R +ES+ Y A+F+ ++ PR RI E
Sbjct: 339 LSPKVMVVTEQDSDHNGSTLMERLLESLYTYAALFDCLETKVPRTSQDRIKVE 391
>TAIR9_protein||AT5G41920.1 | Symbols: | scarecrow transcription factor family
protein | chr5:16779982-16781199 FORWARD
Length = 406
Score = 45 bits (105), Expect = 8e-006
Identities = 21/58 (36%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Frame = +2
Query: 5 LVKSLSPKVMTLVEQE-SNTNTSSFYSRFVESVDYYTAMFESIDAGCPRDDTQRISAE 175
+++ L P ++T+VEQE S + SF RFVE++ YY+A+F+++ G + +R + E
Sbjct: 260 ILRRLKPNLITVVEQELSYDDGGSFLGRFVEALHYYSALFDALGDGLGEESGERFTVE 317
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,384,098,188
Number of Sequences: 33410
Number of Extensions: 5384098188
Number of Successful Extensions: 286802895
Number of sequences better than 0.0: 0
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