BLASTX 7.6.2
Query= RU38171 /QuerySize=149
(148 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G06400.1 | Symbols: CHR11 | CHR11 (CHROMATIN-R... 100 3e-022
TAIR9_protein||AT5G18620.1 | Symbols: CHR17 | CHR17 (CHROMATIN R... 100 3e-022
TAIR9_protein||AT5G18620.2 | Symbols: CHR17 | CHR17 (CHROMATIN R... 100 3e-022
TAIR9_protein||AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2... 62 5e-011
TAIR9_protein||AT2G13370.1 | Symbols: CHR5 | CHR5 (chromatin rem... 59 6e-010
TAIR9_protein||AT5G19310.1 | Symbols: | homeotic gene regulator... 54 1e-008
TAIR9_protein||AT4G31900.1 | Symbols: | chromatin remodeling fa... 54 2e-008
TAIR9_protein||AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, S... 51 2e-007
TAIR9_protein||AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | PIE1 ... 49 8e-007
TAIR9_protein||AT5G44800.1 | Symbols: CHR4 | CHR4 (CHROMATIN REM... 47 2e-006
>TAIR9_protein||AT3G06400.1 | Symbols: CHR11 | CHR11 (CHROMATIN-REMODELING
PROTEIN 11); ATP binding / DNA binding / DNA-dependent ATPase/
helicase/ hydrolase, acting on acid anhydrides, in
phosphorus-containing anhydrides / nucleic acid binding / nucleosome
binding | chr3:1941066-1946700 FORWARD
Length = 1056
Score = 100 bits (247), Expect = 3e-022
Identities = 49/49 (100%)
Frame = -2
Query: 147 HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE 1
HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE
Sbjct: 394 HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE 442
>TAIR9_protein||AT5G18620.1 | Symbols: CHR17 | CHR17 (CHROMATIN REMODELING
FACTOR17); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/
hydrolase, acting on acid anhydrides, in phosphorus-containing
anhydrides / nucleic acid binding / nucleosome binding |
chr5:6196190-6202058 REVERSE
Length = 1070
Score = 100 bits (247), Expect = 3e-022
Identities = 49/49 (100%)
Frame = -2
Query: 147 HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE 1
HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE
Sbjct: 399 HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE 447
>TAIR9_protein||AT5G18620.2 | Symbols: CHR17 | CHR17 (CHROMATIN REMODELING
FACTOR17); ATP binding / DNA binding / DNA-dependent ATPase/ helicase/
hydrolase, acting on acid anhydrides, in phosphorus-containing
anhydrides / nucleic acid binding / nucleosome binding |
chr5:6196190-6202058 REVERSE
Length = 1073
Score = 100 bits (247), Expect = 3e-022
Identities = 49/49 (100%)
Frame = -2
Query: 147 HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE 1
HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE
Sbjct: 399 HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE 447
>TAIR9_protein||AT2G25170.1 | Symbols: PKL, GYM, CHD3, CHR6, SSL2 | PKL
(PICKLE); ATPase/ DNA binding / DNA helicase | chr2:10714411-10723763
FORWARD
Length = 1385
Score = 62 bits (150), Expect = 5e-011
Identities = 27/49 (55%), Positives = 38/49 (77%)
Frame = -2
Query: 147 HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE 1
HK+L P LLRR+K DV K +PPKKE IL+V +S +QK+YYKA+ ++ +
Sbjct: 496 HKMLAPHLLRRVKKDVMKDMPPKKELILRVDLSSLQKEYYKAIFTRNYQ 544
>TAIR9_protein||AT2G13370.1 | Symbols: CHR5 | CHR5 (chromatin remodeling 5); ATP
binding / DNA binding / chromatin binding / helicase/ nucleic acid
binding | chr2:5544601-5555543 REVERSE
Length = 1725
Score = 59 bits (141), Expect = 6e-010
Identities = 28/47 (59%), Positives = 36/47 (76%)
Frame = -2
Query: 147 HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKD 7
H LRP +LRR+ DVEK LPPK E IL+V MS +QKQYYK +L+++
Sbjct: 836 HLELRPHILRRVIKDVEKSLPPKIERILRVEMSPLQKQYYKWILERN 882
>TAIR9_protein||AT5G19310.1 | Symbols: | homeotic gene regulator, putative |
chr5:6498906-6503432 FORWARD
Length = 1065
Score = 54 bits (129), Expect = 1e-008
Identities = 27/41 (65%), Positives = 30/41 (73%)
Frame = -2
Query: 147 HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYK 25
H V+RPFLLRR KS+VEK LP K + ILK MS QK YYK
Sbjct: 600 HHVIRPFLLRRKKSEVEKFLPGKTQVILKCDMSAWQKLYYK 640
>TAIR9_protein||AT4G31900.1 | Symbols: | chromatin remodeling factor, putative
| chr4:15431528-15438443 FORWARD
Length = 1203
Score = 54 bits (127), Expect = 2e-008
Identities = 27/50 (54%), Positives = 36/50 (72%), Gaps = 1/50 (2%)
Frame = -2
Query: 147 HKVLRPFLLRRLKSDVEKG-LPPKKETILKVGMSQMQKQYYKALLQKDLE 1
H++L P LLRRLK DV K +PPKKE IL+V MS QK+ YKA++ + +
Sbjct: 426 HQMLAPHLLRRLKKDVLKDKVPPKKELILRVDMSSQQKEVYKAVITNNYQ 475
>TAIR9_protein||AT5G66750.1 | Symbols: DDM1, CHR01, CHR1, CHA1, SOM4, SOM1,
ATDDM1 | CHR1 (CHROMATIN REMODELING 1); ATPase/ helicase |
chr5:26649050-26652869 FORWARD
Length = 765
Score = 51 bits (120), Expect = 2e-007
Identities = 24/49 (48%), Positives = 33/49 (67%)
Frame = -2
Query: 147 HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE 1
H +LRPF+LRR+K DVE LP KKE I+ M+ QK++ + L+ LE
Sbjct: 421 HGILRPFILRRMKCDVELSLPRKKEIIMYATMTDHQKKFQEHLVNNTLE 469
>TAIR9_protein||AT3G12810.1 | Symbols: PIE1, SRCAP, chr13 | PIE1
(PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1); ATP binding / DNA binding
/ helicase/ nucleic acid binding | chr3:4065636-4073992 FORWARD
Length = 2056
Score = 49 bits (114), Expect = 8e-007
Identities = 23/41 (56%), Positives = 29/41 (70%)
Frame = -2
Query: 147 HKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYK 25
H VLRPFLLRRLK DVEK LP K E ++ +S+ Q+ Y+
Sbjct: 748 HNVLRPFLLRRLKRDVEKQLPSKHEHVIFCRLSKRQRNLYE 788
>TAIR9_protein||AT5G44800.1 | Symbols: CHR4 | CHR4 (CHROMATIN REMODELING 4); ATP
binding / DNA binding / chromatin binding / helicase/ nucleic acid
binding / protein binding / zinc ion binding | chr5:18083659-18092162
REVERSE
Length = 2243
Score = 47 bits (111), Expect = 2e-006
Identities = 19/48 (39%), Positives = 34/48 (70%)
Frame = -2
Query: 144 KVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKDLE 1
K++ P +LRRLK D + +PPK E ++ V ++ +Q +YY+A+L K+ +
Sbjct: 904 KLVAPHMLRRLKKDAMQNIPPKTERMVPVELTSIQAEYYRAMLTKNYQ 951
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,469,433,634
Number of Sequences: 33410
Number of Extensions: 5469433634
Number of Successful Extensions: 287297410
Number of sequences better than 0.0: 0
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