BLASTX 7.6.2
Query= RU40776 /QuerySize=242
(241 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G13140.1 | Symbols: | FUNCTIONS IN: molecular... 68 8e-013
TAIR9_protein||AT5G41050.1 | Symbols: | unknown protein | chr5:... 63 4e-011
TAIR9_protein||AT3G26960.1 | Symbols: | unknown protein | chr3:... 58 1e-009
>TAIR9_protein||AT5G13140.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22
plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Pollen Ole e 1 allergen and extensin (InterPro:IPR006041);
BEST Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT3G26960.1); Has 90 Blast hits to 85 proteins in 14 species:
Archae - 0; Bacteria - 0; Metazoa - 5; Fungi - 0; Plants - 83; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr5:4170688-4171744
REVERSE
Length = 268
Score = 68 bits (165), Expect = 8e-013
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +1
Query: 88 PVAHKATTPTARITVVGAVYCDTCSSNTFSRSSYFLPGVDVVIQCKFRGNS 240
P + P++RITVVG VYCDTCS NTFSR SYFL GV+V + C+F+ +S
Sbjct: 27 PSPEGSLDPSSRITVVGVVYCDTCSINTFSRQSYFLQGVEVHVTCRFKASS 77
>TAIR9_protein||AT5G41050.1 | Symbols: | unknown protein |
chr5:16433478-16434076 REVERSE
Length = 173
Score = 63 bits (151), Expect = 4e-011
Identities = 26/48 (54%), Positives = 34/48 (70%)
Frame = +1
Query: 97 HKATTPTARITVVGAVYCDTCSSNTFSRSSYFLPGVDVVIQCKFRGNS 240
H + P +ITV+G VYCD CS+N+FS SYF+PGV+V I C+F S
Sbjct: 24 HSSAKPNGKITVMGLVYCDVCSNNSFSNHSYFIPGVEVRIICRFNSAS 71
>TAIR9_protein||AT3G26960.1 | Symbols: | unknown protein | chr3:9944859-9945459
REVERSE
Length = 175
Score = 58 bits (138), Expect = 1e-009
Identities = 24/43 (55%), Positives = 32/43 (74%)
Frame = +1
Query: 112 PTARITVVGAVYCDTCSSNTFSRSSYFLPGVDVVIQCKFRGNS 240
P A IT++G VYCD CS N+FS+ SYF+ GV+V I C+F+ S
Sbjct: 33 PDAEITIMGFVYCDVCSKNSFSKHSYFMSGVEVRIVCRFKAAS 75
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,696,865,153
Number of Sequences: 33410
Number of Extensions: 5696865153
Number of Successful Extensions: 302473911
Number of sequences better than 0.0: 0
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