BLASTX 7.6.2
Query= RU42002 /QuerySize=231
(230 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G68520.1 | Symbols: | zinc finger (B-box type... 57 3e-009
TAIR9_protein||AT1G25440.1 | Symbols: | zinc finger (B-box type... 54 1e-008
TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type... 49 7e-007
TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST I... 45 8e-006
TAIR9_protein||AT5G57180.1 | Symbols: CIA2 | CIA2 (CHLOROPLAST I... 45 8e-006
>TAIR9_protein||AT1G68520.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:25709331-25710749 REVERSE
Length = 407
Score = 57 bits (135), Expect = 3e-009
Identities = 30/40 (75%), Positives = 31/40 (77%), Gaps = 4/40 (10%)
Frame = +2
Query: 110 GCRMGMRGDNEQRPGREARVSRYREKRRTRLFSKKIRYEV 229
G +G GD GREARVSRYREKRRTRLFSKKIRYEV
Sbjct: 346 GLHLGDAGDG----GREARVSRYREKRRTRLFSKKIRYEV 381
>TAIR9_protein||AT1G25440.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:8933939-8935284 REVERSE
Length = 418
Score = 54 bits (129), Expect = 1e-008
Identities = 26/26 (100%)
Frame = +2
Query: 152 GREARVSRYREKRRTRLFSKKIRYEV 229
GREARVSRYREKRRTRLFSKKIRYEV
Sbjct: 360 GREARVSRYREKRRTRLFSKKIRYEV 385
>TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:27779214-27780522 FORWARD
Length = 393
Score = 49 bits (114), Expect = 7e-007
Identities = 23/25 (92%), Positives = 24/25 (96%)
Frame = +2
Query: 155 REARVSRYREKRRTRLFSKKIRYEV 229
REARV RY+EKRRTRLFSKKIRYEV
Sbjct: 345 REARVLRYKEKRRTRLFSKKIRYEV 369
>TAIR9_protein||AT5G57180.2 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS
2); transcription regulator | chr5:23168393-23170763 FORWARD
Length = 436
Score = 45 bits (105), Expect = 8e-006
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +2
Query: 155 REARVSRYREKRRTRLFSKKIRYEV 229
REA V RY+EKRRTRLFSKKIRY+V
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQV 407
>TAIR9_protein||AT5G57180.1 | Symbols: CIA2 | CIA2 (CHLOROPLAST IMPORT APPARATUS
2); transcription regulator | chr5:23168393-23170294 FORWARD
Length = 425
Score = 45 bits (105), Expect = 8e-006
Identities = 21/25 (84%), Positives = 23/25 (92%)
Frame = +2
Query: 155 REARVSRYREKRRTRLFSKKIRYEV 229
REA V RY+EKRRTRLFSKKIRY+V
Sbjct: 383 REASVLRYKEKRRTRLFSKKIRYQV 407
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,802,862,040
Number of Sequences: 33410
Number of Extensions: 5802862040
Number of Successful Extensions: 312512627
Number of sequences better than 0.0: 0
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