BLASTX 7.6.2
Query= RU43404 /QuerySize=300
(299 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G12130.1 | Symbols: | KH domain-containing pr... 139 4e-034
TAIR9_protein||AT5G06770.1 | Symbols: | KH domain-containing pr... 134 2e-032
>TAIR9_protein||AT3G12130.1 | Symbols: | KH domain-containing protein / zinc
finger (CCCH type) family protein | chr3:3864486-3866406 REVERSE
Length = 249
Score = 139 bits (349), Expect = 4e-034
Identities = 64/84 (76%), Positives = 76/84 (90%), Gaps = 2/84 (2%)
Frame = -2
Query: 247 MDTRKRGRNEAGGFHAN-GGFKKNKQELDSLSTGVGSKSKPCTKFFSTAGCPFGESCHFL 71
MDTRKRGR EAG F++N GG+KK+KQE++S STG+GSKSKPCTKFFST+GCPFGE+CHFL
Sbjct: 1 MDTRKRGRPEAGSFNSNGGGYKKSKQEMESYSTGLGSKSKPCTKFFSTSGCPFGENCHFL 60
Query: 70 HYVPGGYNAVAQVMNLAPP-PQSS 2
HYVPGGYNAV+Q+ N+ PP PQ S
Sbjct: 61 HYVPGGYNAVSQMTNMGPPIPQVS 84
>TAIR9_protein||AT5G06770.1 | Symbols: | KH domain-containing protein / zinc
finger (CCCH type) family protein | chr5:2090937-2092787 REVERSE
Length = 241
Score = 134 bits (335), Expect = 2e-032
Identities = 59/79 (74%), Positives = 70/79 (88%), Gaps = 1/79 (1%)
Frame = -2
Query: 247 MDTRKRGRNEAGGFH-ANGGFKKNKQELDSLSTGVGSKSKPCTKFFSTAGCPFGESCHFL 71
MD RKRGR EA H +NGGFK++KQE++S+STG+GSKSKPCTKFFST+GCPFG++CHFL
Sbjct: 1 MDARKRGRPEAAASHNSNGGFKRSKQEMESISTGLGSKSKPCTKFFSTSGCPFGDNCHFL 60
Query: 70 HYVPGGYNAVAQVMNLAPP 14
HYVPGGYNA AQ+ NL PP
Sbjct: 61 HYVPGGYNAAAQMTNLRPP 79
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,917,719,227
Number of Sequences: 33410
Number of Extensions: 5917719227
Number of Successful Extensions: 322562582
Number of sequences better than 0.0: 0
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