BLASTX 7.6.2
Query= RU43512 /QuerySize=266
(265 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G38690.1 | Symbols: | FUNCTIONS IN: molecular... 51 1e-007
TAIR9_protein||AT1G67780.1 | Symbols: | FUNCTIONS IN: molecular... 45 6e-006
>TAIR9_protein||AT5G38690.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 21 plant structures;
EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DDT
superfamily (InterPro:IPR018501), DDT subgroup (InterPro:IPR018500),
Cell division cycle-associated protein (InterPro:IPR018866); BEST
Arabidopsis thaliana protein match is: unknown protein
(TAIR:AT1G67780.1); Has 492 Blast hits to 468 proteins in 97 species:
Archae - 9; Bacteria - 41; Metazoa - 179; Fungi - 19; Plants - 99;
Viruses - 2; Other Eukaryotes - 143 (source: NCBI BLink). |
chr5:15479424-15482992 REVERSE
Length = 573
Score = 51 bits (121), Expect = 1e-007
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = -3
Query: 107 SVLGIELPPEDAGNALQFMEFCSAFGEVLKFKKAQ 3
+V GI+L PEDAGN QF+EFCSAFG+ L +K Q
Sbjct: 262 TVSGIDLAPEDAGNVFQFLEFCSAFGKALDLRKGQ 296
>TAIR9_protein||AT1G67780.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: shoot apex, flower, root,
seed; EXPRESSED DURING: petal differentiation and expansion stage, E
expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: DDT superfamily
(InterPro:IPR018501), DDT subgroup (InterPro:IPR018500), Cell division
cycle-associated protein (InterPro:IPR018866); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT1G67270.1); Has 280
Blast hits to 277 proteins in 72 species: Archae - 0; Bacteria - 0;
Metazoa - 114; Fungi - 47; Plants - 92; Viruses - 0; Other Eukaryotes -
27 (source: NCBI BLink). | chr1:25412816-25415530 FORWARD
Length = 516
Score = 45 bits (106), Expect = 6e-006
Identities = 19/35 (54%), Positives = 25/35 (71%)
Frame = -3
Query: 107 SVLGIELPPEDAGNALQFMEFCSAFGEVLKFKKAQ 3
SV G+ +P E+AGN Q EFCSAFG+ L+ K+ Q
Sbjct: 208 SVSGVVIPTEEAGNVFQLFEFCSAFGKALELKEGQ 242
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,917,719,227
Number of Sequences: 33410
Number of Extensions: 5917719227
Number of Successful Extensions: 322562582
Number of sequences better than 0.0: 0
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