BLASTX 7.6.2
Query= RU43538 /QuerySize=282
(281 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G35550.1 | Symbols: HB-4, WOX13, ATWOX13 | WOX... 126 3e-030
TAIR9_protein||AT1G20700.1 | Symbols: WOX14, ATWOX14 | WOX14 (WU... 93 2e-020
TAIR9_protein||AT1G20710.1 | Symbols: WOX10 | WOX10 (WUSCHEL rel... 88 1e-018
>TAIR9_protein||AT4G35550.1 | Symbols: HB-4, WOX13, ATWOX13 | WOX13
(WUSCHEL-RELATED HOMEOBOX 13); DNA binding / transcription factor |
chr4:16875814-16877167 REVERSE
Length = 269
Score = 126 bits (315), Expect = 3e-030
Identities = 59/92 (64%), Positives = 75/92 (81%), Gaps = 1/92 (1%)
Frame = -3
Query: 273 KVMTDDQVEQLRKQIAVYAVICEQLVDMHKAFTAQQDLSGMKMGSVYGD-LMASGGSKVT 97
KVMTD+Q E LRKQIA+Y ICE+LV+MHK TAQQDL+G +MG +Y D +M+S G K+T
Sbjct: 36 KVMTDEQYETLRKQIAIYGTICERLVEMHKTLTAQQDLAGGRMGGLYADPMMSSLGHKMT 95
Query: 96 ARQRWTPTSLQLEILERIYDEANGTPGKHRVK 1
ARQRWTPT +QL+ILERI+D+ GTP K ++K
Sbjct: 96 ARQRWTPTPVQLQILERIFDQGTGTPSKQKIK 127
>TAIR9_protein||AT1G20700.1 | Symbols: WOX14, ATWOX14 | WOX14 (WUSCHEL RELATED
HOMEOBOX 14); DNA binding / transcription factor | chr1:7182558-7183866
FORWARD
Length = 212
Score = 93 bits (230), Expect = 2e-020
Identities = 48/95 (50%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Frame = -3
Query: 273 KVMTDDQVEQLRKQIAVYAVICEQLVDMHKAFTAQQDL-SGMK--MGSVYGDLMASGGS- 106
+VMT++Q+E LRKQIAVYAVIC+QLV +H + ++ L SG++ +G + + AS S
Sbjct: 29 RVMTEEQMEILRKQIAVYAVICDQLVLLHNSLSSYHPLSSGVRPMVGGYFDPMGASSSSH 88
Query: 105 KVTARQRWTPTSLQLEILERIYDEANGTPGKHRVK 1
+++ R RWTPTS QL+ILE IYDE +GTP + R++
Sbjct: 89 RISTRHRWTPTSTQLQILESIYDEGSGTPNRRRIR 123
>TAIR9_protein||AT1G20710.1 | Symbols: WOX10 | WOX10 (WUSCHEL related homeobox
10); DNA binding / transcription factor | chr1:7184485-7185267 FORWARD
Length = 198
Score = 88 bits (216), Expect = 1e-018
Identities = 48/95 (50%), Positives = 65/95 (68%), Gaps = 4/95 (4%)
Frame = -3
Query: 273 KVMTDDQVEQLRKQIAVYAVICEQLVDMHKAFTAQQDL-SGMK-MGSVYGDLMASGGSK- 103
+VMTD+Q+E LRKQIA+YAV+C+QLV +H + ++ L SGM M Y D M + S
Sbjct: 13 RVMTDEQMETLRKQIAIYAVLCDQLVFLHNSLSSVPLLSSGMNPMRGEYFDPMVASSSAH 72
Query: 102 -VTARQRWTPTSLQLEILERIYDEANGTPGKHRVK 1
++ R RWTPT+ QL+ILE IY E +GTP R+K
Sbjct: 73 GMSTRPRWTPTTTQLQILENIYKEGSGTPNPRRIK 107
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,917,719,227
Number of Sequences: 33410
Number of Extensions: 5917719227
Number of Successful Extensions: 322562582
Number of sequences better than 0.0: 0
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