BLASTX 7.6.2
Query= RU44083 /QuerySize=312
(311 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G52320.1 | Symbols: | F-box family protein | ... 54 1e-008
TAIR9_protein||AT3G47150.1 | Symbols: | F-box family protein | ... 54 1e-008
TAIR9_protein||AT2G16450.1 | Symbols: | F-box family protein | ... 51 1e-007
TAIR9_protein||AT2G15640.1 | Symbols: | F-box family protein | ... 51 1e-007
TAIR9_protein||AT5G50220.1 | Symbols: | F-box family protein | ... 50 2e-007
TAIR9_protein||AT1G47300.1 | Symbols: | F-box family protein | ... 49 5e-007
TAIR9_protein||AT4G19930.1 | Symbols: | F-box family protein | ... 49 5e-007
TAIR9_protein||AT1G47340.1 | Symbols: | F-box family protein | ... 48 8e-007
TAIR9_protein||AT1G30790.1 | Symbols: | F-box family protein | ... 48 1e-006
TAIR9_protein||AT5G62660.1 | Symbols: | F-box family protein | ... 47 1e-006
TAIR9_protein||AT5G62060.1 | Symbols: | F-box family protein | ... 47 2e-006
TAIR9_protein||AT1G32420.1 | Symbols: | F-box family protein | ... 47 2e-006
TAIR9_protein||AT3G49450.1 | Symbols: | F-box family protein | ... 47 2e-006
TAIR9_protein||AT1G53790.1 | Symbols: | F-box family protein | ... 46 4e-006
TAIR9_protein||AT1G53790.2 | Symbols: | F-box family protein | ... 46 4e-006
TAIR9_protein||AT4G09190.1 | Symbols: | F-box family protein | ... 45 5e-006
TAIR9_protein||AT4G19940.1 | Symbols: | F-box family protein | ... 45 5e-006
>TAIR9_protein||AT3G52320.1 | Symbols: | F-box family protein |
chr3:19403020-19404192 REVERSE
Length = 391
Score = 54 bits (129), Expect = 1e-008
Identities = 27/55 (49%), Positives = 35/55 (63%)
Frame = +1
Query: 142 IPEEILINILARLPAKSLLRFSCVSQSWRGLIGSPSFVSKHLNRNVTKLSHTYLI 306
IPEE+LI+IL RLPAKSL+RF CVS+ W LI S F ++ + YL+
Sbjct: 27 IPEEMLIDILIRLPAKSLMRFKCVSKLWLSLITSRYFTNRFFKPSSPSCLFAYLV 81
>TAIR9_protein||AT3G47150.1 | Symbols: | F-box family protein |
chr3:17358591-17359765 FORWARD
Length = 361
Score = 54 bits (129), Expect = 1e-008
Identities = 28/57 (49%), Positives = 35/57 (61%)
Frame = +1
Query: 139 YIPEEILINILARLPAKSLLRFSCVSQSWRGLIGSPSFVSKHLNRNVTKLSHTYLIA 309
YIP ++ INIL RLP KSLLRF CVS+ W +I S F ++H N + LIA
Sbjct: 11 YIPLDLQINILLRLPVKSLLRFRCVSKLWCSIITSHDFRNRHFNITSSSAPPRLLIA 67
>TAIR9_protein||AT2G16450.1 | Symbols: | F-box family protein |
chr2:7131520-7132803 REVERSE
Length = 428
Score = 51 bits (120), Expect = 1e-007
Identities = 24/53 (45%), Positives = 34/53 (64%)
Frame = +1
Query: 151 EILINILARLPAKSLLRFSCVSQSWRGLIGSPSFVSKHLNRNVTKLSHTYLIA 309
++++ IL+RLPAKS+ RF CVS+ W + GSP F L R+ TK + IA
Sbjct: 9 DLILEILSRLPAKSVRRFHCVSKRWASIFGSPYFKELFLTRSSTKPRLLFAIA 61
>TAIR9_protein||AT2G15640.1 | Symbols: | F-box family protein |
chr2:6816792-6818072 REVERSE
Length = 427
Score = 51 bits (120), Expect = 1e-007
Identities = 23/48 (47%), Positives = 31/48 (64%)
Frame = +1
Query: 142 IPEEILINILARLPAKSLLRFSCVSQSWRGLIGSPSFVSKHLNRNVTK 285
I ++ + IL+RLPAKS+ RF CVS+ W + GSP F L R+ TK
Sbjct: 6 ITNDLTVEILSRLPAKSVARFHCVSKQWGSIFGSPYFKELFLTRSSTK 53
>TAIR9_protein||AT5G50220.1 | Symbols: | F-box family protein |
chr5:20446068-20447200 REVERSE
Length = 358
Score = 50 bits (119), Expect = 2e-007
Identities = 23/57 (40%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Frame = +1
Query: 142 IPEEILINILARLPAKSLLRFSCVSQSWRGLIGSP-SFVSKHLNRNVTKLSHTYLIA 309
IP ++++ IL +LPAKSL++F CVS+ W +IGS F+ + R++++ S LI+
Sbjct: 33 IPIDLMVEILKKLPAKSLIKFQCVSKQWSSIIGSSRDFIDSIVTRSLSQPSRDILIS 89
>TAIR9_protein||AT1G47300.1 | Symbols: | F-box family protein |
chr1:17339561-17340972 REVERSE
Length = 307
Score = 49 bits (115), Expect = 5e-007
Identities = 20/48 (41%), Positives = 31/48 (64%)
Frame = +1
Query: 142 IPEEILINILARLPAKSLLRFSCVSQSWRGLIGSPSFVSKHLNRNVTK 285
IP+E+++ I+ RLPAKS+ RF CVS+ W ++ P F L + T+
Sbjct: 6 IPKELILEIMLRLPAKSIARFHCVSKQWASMLSRPYFTELFLTSSSTQ 53
>TAIR9_protein||AT4G19930.1 | Symbols: | F-box family protein |
chr4:10803558-10804853 FORWARD
Length = 432
Score = 49 bits (115), Expect = 5e-007
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 7/64 (10%)
Frame = +1
Query: 76 RMRRNKCKKXXXXXXXXXXXXYIPEEILINILARLPAKSLLRFSCVSQSWRGLIGSPSFV 255
R RR+ CK YIP +++I IL RLPAKSL+RF VS+ W LI S +F
Sbjct: 28 RRRRDMCK-------SHEPMPYIPFDLVIEILTRLPAKSLMRFKSVSKLWSSLICSRTFT 80
Query: 256 SKHL 267
++ L
Sbjct: 81 NRLL 84
>TAIR9_protein||AT1G47340.1 | Symbols: | F-box family protein |
chr1:17354123-17356494 REVERSE
Length = 460
Score = 48 bits (113), Expect = 8e-007
Identities = 20/45 (44%), Positives = 30/45 (66%)
Frame = +1
Query: 142 IPEEILINILARLPAKSLLRFSCVSQSWRGLIGSPSFVSKHLNRN 276
+P+E+++ IL RLPAKS+ RF CVS+ W ++ P F L R+
Sbjct: 37 LPKELILEILKRLPAKSVKRFHCVSKQWASMLSCPHFRELFLTRS 81
>TAIR9_protein||AT1G30790.1 | Symbols: | F-box family protein |
chr1:10932713-10933912 FORWARD
Length = 400
Score = 48 bits (112), Expect = 1e-006
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = +1
Query: 139 YIPEEILINILARLPAKSLLRFSCVSQSWRGLIGSPSFVSKHLNRNVTK 285
+IP ++ + IL RLPAKSL++F CVS+ W +I + SF+ + + T+
Sbjct: 8 HIPFDLTVEILTRLPAKSLMKFKCVSKLWSSIIHNQSFIDSFYSISSTR 56
>TAIR9_protein||AT5G62660.1 | Symbols: | F-box family protein |
chr5:25156326-25157465 REVERSE
Length = 380
Score = 47 bits (111), Expect = 1e-006
Identities = 23/42 (54%), Positives = 30/42 (71%)
Frame = +1
Query: 142 IPEEILINILARLPAKSLLRFSCVSQSWRGLIGSPSFVSKHL 267
IP ++LI IL +LPAKSL+RF CVS+ W LI S F + +L
Sbjct: 41 IPLDLLIEILTKLPAKSLMRFKCVSKLWSSLIRSRFFSNCYL 82
>TAIR9_protein||AT5G62060.1 | Symbols: | F-box family protein |
chr5:24927688-24928698 FORWARD
Length = 304
Score = 47 bits (110), Expect = 2e-006
Identities = 23/48 (47%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Frame = +1
Query: 142 IPEEILINILARLPAKSLLRFSCVSQSWRGLIGS-PSFVSKHLNRNVT 282
IP +I + IL +LPAKSL+RF CVS+ W +IGS F+ + R++T
Sbjct: 33 IPLDITVEILKKLPAKSLVRFQCVSKQWSTIIGSRRDFIDSIVARSMT 80
>TAIR9_protein||AT1G32420.1 | Symbols: | F-box family protein |
chr1:11701995-11702903 FORWARD
Length = 303
Score = 47 bits (109), Expect = 2e-006
Identities = 22/49 (44%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Frame = +1
Query: 142 IPEEILINILARLPAKSLLRFSCVSQSWRGLIGS-PSFVSKHLNRNVTK 285
IP ++ + IL +LPAKSLLRF CVS+ W +I S F+ + R++T+
Sbjct: 37 IPLDLTVEILKKLPAKSLLRFQCVSKQWLSIISSRRDFIDSIVTRSLTQ 85
>TAIR9_protein||AT3G49450.1 | Symbols: | F-box family protein |
chr3:18337305-18338498 REVERSE
Length = 398
Score = 47 bits (109), Expect = 2e-006
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +1
Query: 142 IPEEILINILARLPAKSLLRFSCVSQSWRGLIGSPSFVSKHLNRN 276
+P ++++ IL+R+PAKS RF CVS W L+ SP + L R+
Sbjct: 32 LPTDLMVEILSRVPAKSAARFRCVSNDWNSLLRSPYLTNLFLKRS 76
>TAIR9_protein||AT1G53790.1 | Symbols: | F-box family protein |
chr1:20079694-20081394 REVERSE
Length = 445
Score = 46 bits (107), Expect = 4e-006
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +1
Query: 139 YIPEEILINILARLPAKSLLRFSCVSQSWRGLIGSPSF 252
YIP ++L++I +R+PAKS+ RF CVS+ W ++ P F
Sbjct: 81 YIPIDLLMDIFSRVPAKSIARFRCVSKLWESILCRPDF 118
>TAIR9_protein||AT1G53790.2 | Symbols: | F-box family protein |
chr1:20079558-20081394 REVERSE
Length = 462
Score = 46 bits (107), Expect = 4e-006
Identities = 18/38 (47%), Positives = 28/38 (73%)
Frame = +1
Query: 139 YIPEEILINILARLPAKSLLRFSCVSQSWRGLIGSPSF 252
YIP ++L++I +R+PAKS+ RF CVS+ W ++ P F
Sbjct: 81 YIPIDLLMDIFSRVPAKSIARFRCVSKLWESILCRPDF 118
>TAIR9_protein||AT4G09190.1 | Symbols: | F-box family protein |
chr4:5855176-5856327 FORWARD
Length = 384
Score = 45 bits (106), Expect = 5e-006
Identities = 20/56 (35%), Positives = 36/56 (64%)
Frame = +1
Query: 139 YIPEEILINILARLPAKSLLRFSCVSQSWRGLIGSPSFVSKHLNRNVTKLSHTYLI 306
+IP ++++ I++ LPAKS++RF VS+ W +I +P F S + R+++ LI
Sbjct: 21 HIPLDLIVEIVSSLPAKSIVRFRSVSKLWSSIITTPDFTSSVVTRSLSSRPCVLLI 76
>TAIR9_protein||AT4G19940.1 | Symbols: | F-box family protein |
chr4:10806195-10807430 FORWARD
Length = 412
Score = 45 bits (106), Expect = 5e-006
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Frame = +1
Query: 76 RMRRNKCKKXXXXXXXXXXXXYIPEEILINILARLPAKSLLRFSCVSQSWRGLIGSPSFV 255
R RR+ CK IP +++I IL RLPAKSL+RF VS+ W LI S +F
Sbjct: 20 RRRRDLCKSRQPIPE-------IPFDLVIEILTRLPAKSLMRFKSVSKLWSSLICSRNFT 72
Query: 256 SKHL 267
++ L
Sbjct: 73 NRLL 76
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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