BLASTX 7.6.2
Query= RU44312 /QuerySize=825
(824 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G01810.1 | Symbols: | FUNCTIONS IN: molecular... 216 2e-056
TAIR9_protein||AT3G01810.2 | Symbols: | FUNCTIONS IN: molecular... 216 2e-056
TAIR9_protein||AT5G43230.1 | Symbols: | unknown protein | chr5:... 111 1e-024
>TAIR9_protein||AT3G01810.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is: nucleolar
protein gar2-related (TAIR:AT2G42320.2); Has 1293 Blast hits to 384
proteins in 97 species: Archae - 2; Bacteria - 96; Metazoa - 212; Fungi
- 99; Plants - 59; Viruses - 0; Other Eukaryotes - 825 (source: NCBI
BLink). | chr3:289218-292557 FORWARD
Length = 922
Score = 216 bits (549), Expect = 2e-056
Identities = 111/168 (66%), Positives = 132/168 (78%), Gaps = 7/168 (4%)
Frame = +2
Query: 224 MVIGLKAKNHRGPTVQIDYLAHILEIKPWPPSQSLKSLRSVLIQWENGDRSSGSTNAVVP 403
MV+GL +KN R +VQ+DYL HI +IKPWPPSQSL+SLRSV+IQWENGDR+SG+T+ V P
Sbjct: 1 MVLGLSSKNRRCSSVQVDYLIHIHDIKPWPPSQSLRSLRSVVIQWENGDRNSGTTSVVAP 60
Query: 404 SIGSVDGEGRIEFNESFKLPVTLLRDVAXXXXXXXXXXXDAFLKNCLELNLYEPRRDKTA 583
S+GSV GEG+IEFNESFKLP+TLL+DV+ D F KN LELNLYEPRR+KT
Sbjct: 61 SLGSVIGEGKIEFNESFKLPLTLLKDVS-----ARGKGGDVFFKNVLELNLYEPRREKT- 114
Query: 584 KGQLLATAIIDLADYGVVKECISVSAPMNSKRSI.NTDKPILYMKIQP 727
QLLATA IDLA YGVVKE S++A MNSKRS N +P+LY+ IQP
Sbjct: 115 -HQLLATATIDLAVYGVVKESFSLTAQMNSKRSYRNATQPVLYLTIQP 161
>TAIR9_protein||AT3G01810.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13
growth stages; BEST Arabidopsis thaliana protein match is: nucleolar
protein gar2-related (TAIR:AT2G42320.2); Has 1224 Blast hits to 385
proteins in 102 species: Archae - 2; Bacteria - 107; Metazoa - 205;
Fungi - 107; Plants - 62; Viruses - 0; Other Eukaryotes - 741 (source:
NCBI BLink). | chr3:289218-292375 FORWARD
Length = 860
Score = 216 bits (549), Expect = 2e-056
Identities = 111/168 (66%), Positives = 132/168 (78%), Gaps = 7/168 (4%)
Frame = +2
Query: 224 MVIGLKAKNHRGPTVQIDYLAHILEIKPWPPSQSLKSLRSVLIQWENGDRSSGSTNAVVP 403
MV+GL +KN R +VQ+DYL HI +IKPWPPSQSL+SLRSV+IQWENGDR+SG+T+ V P
Sbjct: 1 MVLGLSSKNRRCSSVQVDYLIHIHDIKPWPPSQSLRSLRSVVIQWENGDRNSGTTSVVAP 60
Query: 404 SIGSVDGEGRIEFNESFKLPVTLLRDVAXXXXXXXXXXXDAFLKNCLELNLYEPRRDKTA 583
S+GSV GEG+IEFNESFKLP+TLL+DV+ D F KN LELNLYEPRR+KT
Sbjct: 61 SLGSVIGEGKIEFNESFKLPLTLLKDVS-----ARGKGGDVFFKNVLELNLYEPRREKT- 114
Query: 584 KGQLLATAIIDLADYGVVKECISVSAPMNSKRSI.NTDKPILYMKIQP 727
QLLATA IDLA YGVVKE S++A MNSKRS N +P+LY+ IQP
Sbjct: 115 -HQLLATATIDLAVYGVVKESFSLTAQMNSKRSYRNATQPVLYLTIQP 161
>TAIR9_protein||AT5G43230.1 | Symbols: | unknown protein |
chr5:17349125-17352747 FORWARD
Length = 849
Score = 111 bits (275), Expect = 1e-024
Identities = 66/169 (39%), Positives = 98/169 (57%), Gaps = 19/169 (11%)
Frame = +2
Query: 224 MVIGLKAKNHRGPTVQIDYLAHILEIKPWPPSQSLKSLRSVLIQWENGDRSSGSTNAVVP 403
MV+GL+ K+ R V ++YL I E+KPWP SQ + VL++WENG+ +SGS AVV
Sbjct: 1 MVLGLRTKSRRDNGVFVEYLISIKELKPWPTSQ--VPAQCVLLKWENGENNSGSFIAVV- 57
Query: 404 SIGSVDGEGRIEFNESFKLPVTLLRDVAXXXXXXXXXXXDAFLKNCLELNLYE-PRRDKT 580
G+ I FNESF+L +TL V + F KN LEL++Y+ ++DK
Sbjct: 58 ------GKDTIMFNESFRLTLTLEPKVG---------SDNKFHKNLLELHVYDAKKKDKG 102
Query: 581 AKGQLLATAIIDLADYGVVKECISVSAPMNSKRSI.NTDKPILYMKIQP 727
K +LL TA ++LAD+G++ + V AP K+S N +Y+ ++P
Sbjct: 103 VKNKLLGTASVNLADFGLLTNSVPVGAPFTFKKSSRNDASSEIYLTVEP 151
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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