BLASTX 7.6.2
Query= RU44334 /QuerySize=845
(844 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G18400.1 | Symbols: | ribosomal protein L6 fa... 174 9e-044
TAIR9_protein||AT1G05190.1 | Symbols: emb2394 | emb2394 (embryo ... 80 1e-015
>TAIR9_protein||AT2G18400.1 | Symbols: | ribosomal protein L6 family protein |
chr2:7989665-7989973 REVERSE
Length = 103
Score = 174 bits (439), Expect = 9e-044
Identities = 82/93 (88%), Positives = 85/93 (91%)
Frame = +1
Query: 199 MEAQFFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGI 378
MEA+FFRFLKIVGVGYKARAE GR LYLKLGYSHEVEL VPPAVRVFCFK+NVVCCTGI
Sbjct: 1 MEAKFFRFLKIVGVGYKARAEEAGRFLYLKLGYSHEVELAVPPAVRVFCFKNNVVCCTGI 60
Query: 379 DKNRVHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
DK RVHQFAA VRSCKPPE YKGKGIMY DEV+
Sbjct: 61 DKQRVHQFAATVRSCKPPEPYKGKGIMYTDEVV 93
>TAIR9_protein||AT1G05190.1 | Symbols: emb2394 | emb2394 (embryo defective
2394); structural constituent of ribosome | chr1:1502515-1503738
REVERSE
Length = 224
Score = 80 bits (196), Expect = 1e-015
Identities = 39/89 (43%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
Frame = +1
Query: 211 FFRFLKIVGVGYKARAEAQGRLLYLKLGYSHEVELTVPPAVRVFCFKSNVVCCTGIDKNR 390
F + L +VGVGY RA G+ L L LG+SH V++ +P +++V ++ + +G DK+
Sbjct: 126 FEKKLILVGVGY--RATVDGKELVLNLGFSHPVKMQIPDSLKVKVEENTRITVSGYDKSE 183
Query: 391 VHQFAAAVRSCKPPEVYKGKGIMYIDEVI 477
+ QFAA VR +PPE YKGKG+ Y DE++
Sbjct: 184 IGQFAATVRKWRPPEPYKGKGVKYSDEIV 212
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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