BLASTX 7.6.2
Query= RU44444 /QuerySize=861
(860 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G58660.1 | Symbols: | 60S ribosomal protein-r... 256 1e-068
TAIR9_protein||AT2G42650.1 | Symbols: | 60S ribosomal protein-r... 240 8e-064
TAIR9_protein||AT1G06380.1 | Symbols: | ribosomal protein-relat... 201 4e-052
>TAIR9_protein||AT3G58660.1 | Symbols: | 60S ribosomal protein-related |
chr3:21701574-21702914 FORWARD
Length = 447
Score = 256 bits (653), Expect = 1e-068
Identities = 118/210 (56%), Positives = 160/210 (76%), Gaps = 3/210 (1%)
Frame = +3
Query: 171 NAVNALLKWRNSKSEAQKPDILSSDELLYLVVSLKKIPPKGRVNAYKIPLPTPLHSQVT- 347
+A+N L+ WR+ KS+ +KP +L DEL+YL V+LKKIP K R NAY+IPLP PL +
Sbjct: 31 SALNGLINWRSDKSKTEKPQLLEEDELVYLFVTLKKIPQKTRTNAYRIPLPHPLINPTVD 90
Query: 348 --EFCLIYDDRPKSKLTKAQIQAKIKADNLPVVKILKYTKLKSDYKAFESKRKLLNSYDV 521
E CLI DDRPKS LTK KIK++N+P+ K++K +KLKSDYKAFE+KRKL +SYD+
Sbjct: 91 SPEICLIIDDRPKSGLTKDDAMKKIKSENIPITKVIKLSKLKSDYKAFEAKRKLCDSYDM 150
Query: 522 FLADKQIVPLLPRLIGKQFFKKKKIPVPVDLLHKNWKEQIDRICGSALLFLSTGTCSVVR 701
F D++I+PLLPR+IGK+FF KKIPV +DL H+NWK QI++ CGSA+ F+ TGTCSV++
Sbjct: 151 FFTDRRIIPLLPRVIGKKFFTSKKIPVALDLKHRNWKHQIEKACGSAMFFIRTGTCSVIK 210
Query: 702 VARTSMREEEI.ENVVSAISGIVDIVP.NW 791
V + SM EI ENV++ ++G+V+ +P W
Sbjct: 211 VGKLSMDICEITENVMATLNGLVEFLPNKW 240
>TAIR9_protein||AT2G42650.1 | Symbols: | 60S ribosomal protein-related |
chr2:17765530-17766648 FORWARD
Length = 373
Score = 240 bits (612), Expect = 8e-064
Identities = 108/210 (51%), Positives = 156/210 (74%), Gaps = 3/210 (1%)
Frame = +3
Query: 171 NAVNALLKWRNSKSEAQKPDILSSDELLYLVVSLKKIPPKGRVNAYKIPLPTPLHSQV-- 344
+AV AL+K N KS +KP +L D YLVV+LKKIP + NAY+IPLP PL +
Sbjct: 11 DAVKALVKEGNEKSRTEKPQLLEEDGFFYLVVALKKIPQRNFTNAYRIPLPHPLINTTED 70
Query: 345 -TEFCLIYDDRPKSKLTKAQIQAKIKADNLPVVKILKYTKLKSDYKAFESKRKLLNSYDV 521
E CLI DDRP+S LT+ + IK++N+P+ K++K +KLKSDY +FESKRKL +SYD+
Sbjct: 71 SPELCLIIDDRPESGLTEEDAKKNIKSENIPITKVVKLSKLKSDYGSFESKRKLCDSYDM 130
Query: 522 FLADKQIVPLLPRLIGKQFFKKKKIPVPVDLLHKNWKEQIDRICGSALLFLSTGTCSVVR 701
F +D++++P+LP+LIGK+FF+ KK PV +DL H NWKEQI++ CG+A+ F+ TG+CS ++
Sbjct: 131 FFSDRRVIPMLPKLIGKKFFQSKKTPVAIDLKHMNWKEQIEKACGAAMFFMRTGSCSAIK 190
Query: 702 VARTSMREEEI.ENVVSAISGIVDIVP.NW 791
VA+ SM ++I ENV + ++G+VD++P W
Sbjct: 191 VAKLSMESDDIVENVTATLNGVVDVLPSRW 220
>TAIR9_protein||AT1G06380.1 | Symbols: | ribosomal protein-related |
chr1:1945124-1945888 FORWARD
Length = 255
Score = 201 bits (511), Expect = 4e-052
Identities = 96/210 (45%), Positives = 146/210 (69%), Gaps = 8/210 (3%)
Frame = +3
Query: 174 AVNALLKWRNSKSEAQKPDILSSDELLYLVVSLKKIPPKGRVNAYKIPLPTPLHSQVT-- 347
AV +LLKW +SKS+ + + L +D +YL+V+LK+IP R N IPLP PL V
Sbjct: 26 AVKSLLKWWDSKSKTENSESLENDGFVYLIVTLKRIPQLDRTNPLMIPLPHPLIDLVAED 85
Query: 348 --EFCLIYDDRPKSKLTKAQIQAKIKADNLPVVKILKYTKLKSDYKAFESKRKLLNSYDV 521
E CLI DD+ K+K+TK KI+A+ +P+ ++K +KLKSD + E +++ +++
Sbjct: 86 PPELCLIIDDKHKNKITKEAALKKIEAEKIPITTVIKVSKLKSDLRKLEEEKR----FEL 141
Query: 522 FLADKQIVPLLPRLIGKQFFKKKKIPVPVDLLHKNWKEQIDRICGSALLFLSTGTCSVVR 701
+ A+++++P+LP+L+GK+F KK K P+ ++L H +WKEQI++ C SAL F+ TGTCSVV+
Sbjct: 142 YFAERRLMPMLPKLLGKEFVKKNKTPIAINLRHGSWKEQIEKACESALFFVGTGTCSVVK 201
Query: 702 VARTSMREEEI.ENVVSAISGIVDIVP.NW 791
VA+ SM EI ENVV+A++GI D+VP W
Sbjct: 202 VAKLSMGRNEIAENVVAAMNGIGDLVPGRW 231
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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