BLASTX 7.6.2
Query= RU44453 /QuerySize=423
(422 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G24820.1 | Symbols: | BSD domain-containing p... 140 3e-034
TAIR9_protein||AT1G69030.1 | Symbols: | INVOLVED IN: biological... 105 2e-023
TAIR9_protein||AT1G26300.1 | Symbols: | BSD domain-containing p... 101 3e-022
TAIR9_protein||AT1G26300.2 | Symbols: | BSD domain-containing p... 96 7e-021
>TAIR9_protein||AT3G24820.1 | Symbols: | BSD domain-containing protein |
chr3:9062717-9064366 REVERSE
Length = 187
Score = 140 bits (352), Expect = 3e-034
Identities = 71/145 (48%), Positives = 100/145 (68%), Gaps = 11/145 (7%)
Frame = +3
Query: 18 LSSGIRRNLLRNTEKTQXXXXXXXXXX-----XXXLLGVTEQLINHVKSFTLETFKTFPL 182
++S IRR+ LR +++ +LGVT++LI+HV+SFT++TFK F L
Sbjct: 3 IASRIRRSFLREKKESSDGNSLKNGSSVKEEGKDEILGVTDELIDHVRSFTIDTFKNFSL 62
Query: 183 PDDEGATS------GDNSLTTSSNIQKDLSEWQERHAMFVLSKVKELSHLRYKLCPGHMK 344
D+E S DN +++S+N++KDLS+WQE+HA+ VLSK KELS LR+KLCP +K
Sbjct: 63 EDEEEEVSVNPLGDEDNGMSSSANVKKDLSDWQEKHAVLVLSKSKELSQLRFKLCPRVLK 122
Query: 345 EHQFWRVYFMLVKKQVAEYELRAIQ 419
EHQFWR+YF LV+K VA+YE+ AIQ
Sbjct: 123 EHQFWRIYFQLVRKIVAKYEVLAIQ 147
>TAIR9_protein||AT1G69030.1 | Symbols: | INVOLVED IN: biological_process
unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth
stages; CONTAINS InterPro DOMAIN/s: BSD (InterPro:IPR005607); BEST
Arabidopsis thaliana protein match is: BSD domain-containing protein
(TAIR:AT1G26300.1); Has 173 Blast hits to 173 proteins in 34 species:
Archae - 4; Bacteria - 4; Metazoa - 52; Fungi - 10; Plants - 92;
Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). |
chr1:25947429-25949262 REVERSE
Length = 318
Score = 105 bits (260), Expect = 2e-023
Identities = 51/102 (50%), Positives = 68/102 (66%), Gaps = 2/102 (1%)
Frame = +3
Query: 114 GVTEQLINHVKSFTLETFKTFPLPDDEGATSGDNSLTTSSNIQKDLSEWQERHAMFVLSK 293
G+T+ L VK T TF+ FP D+ S + T++SN++KDLSEWQERHA VL
Sbjct: 129 GITDDLREFVKGLTSATFQAFPEQDESSEVS--DLETSASNVRKDLSEWQERHATLVLGS 186
Query: 294 VKELSHLRYKLCPGHMKEHQFWRVYFMLVKKQVAEYELRAIQ 419
VK++S LRY+LCP MKE +FWR+YF LV VA YE + ++
Sbjct: 187 VKQISKLRYELCPRVMKERRFWRIYFTLVSTHVAPYERKYME 228
>TAIR9_protein||AT1G26300.1 | Symbols: | BSD domain-containing protein |
chr1:9096023-9099746 REVERSE
Length = 317
Score = 101 bits (249), Expect = 3e-022
Identities = 47/102 (46%), Positives = 67/102 (65%), Gaps = 2/102 (1%)
Frame = +3
Query: 114 GVTEQLINHVKSFTLETFKTFPLPDDEGATSGDNSLTTSSNIQKDLSEWQERHAMFVLSK 293
GVT+ L + T TF+ F PD + + +T +SN++KDLS+WQERHA VL+
Sbjct: 121 GVTDDLREFAEGLTSATFQAF--PDQDQGDEVSDVITNASNVRKDLSDWQERHATLVLTS 178
Query: 294 VKELSHLRYKLCPGHMKEHQFWRVYFMLVKKQVAEYELRAIQ 419
VK++S LRY+LCP MKE +FWR+YF LV V+ YE + ++
Sbjct: 179 VKQISKLRYELCPRFMKERRFWRIYFTLVSTHVSPYERKYME 220
>TAIR9_protein||AT1G26300.2 | Symbols: | BSD domain-containing protein |
chr1:9098937-9099746 REVERSE
Length = 214
Score = 96 bits (237), Expect = 7e-021
Identities = 45/94 (47%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Frame = +3
Query: 114 GVTEQLINHVKSFTLETFKTFPLPDDEGATSGDNSLTTSSNIQKDLSEWQERHAMFVLSK 293
GVT+ L + T TF+ F PD + + +T +SN++KDLS+WQERHA VL+
Sbjct: 121 GVTDDLREFAEGLTSATFQAF--PDQDQGDEVSDVITNASNVRKDLSDWQERHATLVLTS 178
Query: 294 VKELSHLRYKLCPGHMKEHQFWRVYFMLVKKQVA 395
VK++S LRY+LCP MKE +FWR+YF LV V+
Sbjct: 179 VKQISKLRYELCPRFMKERRFWRIYFTLVSTHVS 212
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
|