BLASTX 7.6.2
Query= RU44469 /QuerySize=422
(421 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G42740.1 | Symbols: RPL16A | RPL16A; structura... 215 1e-056
TAIR9_protein||AT3G58700.1 | Symbols: | 60S ribosomal protein L... 215 1e-056
TAIR9_protein||AT4G18730.1 | Symbols: RPL16B | RPL16B; structura... 215 1e-056
TAIR9_protein||AT5G45775.2 | Symbols: | 60S ribosomal protein L... 215 1e-056
TAIR9_protein||AT5G45775.1 | Symbols: | 60S ribosomal protein L... 199 8e-052
>TAIR9_protein||AT2G42740.1 | Symbols: RPL16A | RPL16A; structural constituent
of ribosome | chr2:17791794-17792946 FORWARD
Length = 183
Score = 215 bits (545), Expect = 1e-056
Identities = 107/114 (93%), Positives = 113/114 (99%)
Frame = +3
Query: 78 MASEKKLAHPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 257
MASEKKL++PMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 258 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDL 419
IRRNEKIACYVTVRG+KAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDL
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL 114
>TAIR9_protein||AT3G58700.1 | Symbols: | 60S ribosomal protein L11 (RPL11B) |
chr3:21711661-21712816 FORWARD
Length = 183
Score = 215 bits (545), Expect = 1e-056
Identities = 107/114 (93%), Positives = 113/114 (99%)
Frame = +3
Query: 78 MASEKKLAHPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 257
MASEKKL++PMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 258 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDL 419
IRRNEKIACYVTVRG+KAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDL
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL 114
>TAIR9_protein||AT4G18730.1 | Symbols: RPL16B | RPL16B; structural constituent
of ribosome | chr4:10302238-10303206 FORWARD
Length = 183
Score = 215 bits (545), Expect = 1e-056
Identities = 107/114 (93%), Positives = 113/114 (99%)
Frame = +3
Query: 78 MASEKKLAHPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 257
MASEKKL++PMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 258 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDL 419
IRRNEKIACYVTVRG+KAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDL
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL 114
>TAIR9_protein||AT5G45775.2 | Symbols: | 60S ribosomal protein L11 (RPL11D) |
chr5:18565281-18566496 REVERSE
Length = 183
Score = 215 bits (545), Expect = 1e-056
Identities = 107/114 (93%), Positives = 113/114 (99%)
Frame = +3
Query: 78 MASEKKLAHPMREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFG 257
MASEKKL++PMR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFG
Sbjct: 1 MASEKKLSNPMRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFG 60
Query: 258 IRRNEKIACYVTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDL 419
IRRNEKIACYVTVRG+KAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDL
Sbjct: 61 IRRNEKIACYVTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL 114
>TAIR9_protein||AT5G45775.1 | Symbols: | 60S ribosomal protein L11 (RPL11D) |
chr5:18565281-18566377 REVERSE
Length = 173
Score = 199 bits (504), Expect = 8e-052
Identities = 99/104 (95%), Positives = 103/104 (99%)
Frame = +3
Query: 108 MREIKVQKLVLNISVGESGDRLTRAAKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACY 287
MR+IKVQKLVLNISVGESGDRLTRA+KVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACY
Sbjct: 1 MRDIKVQKLVLNISVGESGDRLTRASKVLEQLSGQTPVFSKARYTVRSFGIRRNEKIACY 60
Query: 288 VTVRGDKAMSLLESGLKVKEYELLRKNFSDTGCFGFGIQEHIDL 419
VTVRG+KAM LLESGLKVKEYELLR+NFSDTGCFGFGIQEHIDL
Sbjct: 61 VTVRGEKAMQLLESGLKVKEYELLRRNFSDTGCFGFGIQEHIDL 104
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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