BLASTX 7.6.2
Query= RU44564 /QuerySize=861
(860 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G72210.1 | Symbols: | basic helix-loop-helix ... 132 4e-031
TAIR9_protein||AT1G22490.1 | Symbols: | basic helix-loop-helix ... 122 4e-028
TAIR9_protein||AT4G01460.1 | Symbols: | basic helix-loop-helix ... 113 2e-025
TAIR9_protein||AT3G24140.1 | Symbols: FMA | FMA (FAMA); DNA bind... 112 3e-025
TAIR9_protein||AT3G61950.1 | Symbols: | basic helix-loop-helix ... 105 6e-023
TAIR9_protein||AT3G61950.2 | Symbols: | basic helix-loop-helix ... 105 6e-023
TAIR9_protein||AT2G46810.1 | Symbols: | basic helix-loop-helix ... 103 2e-022
TAIR9_protein||AT5G46690.1 | Symbols: bHLH071 | bHLH071 (beta HL... 101 1e-021
TAIR9_protein||AT5G53210.1 | Symbols: SPCH | SPCH (SPEECHLESS); ... 94 1e-019
TAIR9_protein||AT5G65320.1 | Symbols: | basic helix-loop-helix ... 89 3e-018
TAIR9_protein||AT3G06120.1 | Symbols: MUTE | MUTE (MUTE); DNA bi... 84 1e-016
TAIR9_protein||AT2G16910.1 | Symbols: AMS | AMS (ABORTED MICROSP... 51 9e-007
>TAIR9_protein||AT1G72210.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein (bHLH096) | chr1:27180066-27182268 FORWARD
Length = 321
Score = 132 bits (330), Expect = 4e-031
Identities = 94/201 (46%), Positives = 113/201 (56%), Gaps = 27/201 (13%)
Frame = +3
Query: 252 EAVVYPKDYNPFSYV-CEDFYSLAPSNWGYDFSLQE----NIQD-KALVGLLDHQ----- 398
EAVVYP+D PFSY+ C+DF YD QE + QD K + L Q
Sbjct: 4 EAVVYPQD--PFSYISCKDFPF-------YDLYFQEEEDQDPQDTKNNIKLGQGQGHGFA 54
Query: 399 YNNIHHHQGSLNENWEYNCSSSP-PSLLQNVKEWDPHSSPEALETXXXXXXQAXXXXXXX 575
NN + G ++++ YN P L D S P + A
Sbjct: 55 SNNYNGRTGDYSDDYNYNEEDLQWPRDLPYGSAVDTESQPPPSDVA------AGGGRRKR 108
Query: 576 XXXXSSKNKEEMENQRMTHIVVERNRRKQMNEYLAVLRSLMPTSYVQRGDQASIIGGAIN 755
SSKNKEE+ENQRMTHI VERNRRKQMNEYLAVLRSLMP Y QRGDQASI+GGAIN
Sbjct: 109 RRTRSSKNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPPYYAQRGDQASIVGGAIN 168
Query: 756 FVKELEQLLQSMDGSHKSSTK 818
++KELE LQSM+ K++T+
Sbjct: 169 YLKELEHHLQSMEPPVKTATE 189
>TAIR9_protein||AT1G22490.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr1:7938448-7940489 REVERSE
Length = 305
Score = 122 bits (304), Expect = 4e-028
Identities = 59/77 (76%), Positives = 67/77 (87%)
Frame = +3
Query: 594 KNKEEMENQRMTHIVVERNRRKQMNEYLAVLRSLMPTSYVQRGDQASIIGGAINFVKELE 773
KNKEE+ENQRMTHI VERNRRKQMNEYLAVLRSLMP+SY QRGDQASI+GGAIN+VKELE
Sbjct: 105 KNKEEIENQRMTHIAVERNRRKQMNEYLAVLRSLMPSSYAQRGDQASIVGGAINYVKELE 164
Query: 774 QLLQSMDGSHKSSTKPE 824
+LQSM+ + P+
Sbjct: 165 HILQSMEPKRTRTHDPK 181
>TAIR9_protein||AT4G01460.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr4:621334-622697 FORWARD
Length = 316
Score = 113 bits (282), Expect = 2e-025
Identities = 54/78 (69%), Positives = 66/78 (84%)
Frame = +3
Query: 594 KNKEEMENQRMTHIVVERNRRKQMNEYLAVLRSLMPTSYVQRGDQASIIGGAINFVKELE 773
KNK+E+ENQRMTHI VERNRR+QMNE+L LRSLMP S++QRGDQASI+GGAI+F+KELE
Sbjct: 105 KNKDEVENQRMTHIAVERNRRRQMNEHLNSLRSLMPPSFLQRGDQASIVGGAIDFIKELE 164
Query: 774 QLLQSMDGSHKSSTKPET 827
QLLQS++ + ET
Sbjct: 165 QLLQSLEAEKRKDGTDET 182
>TAIR9_protein||AT3G24140.1 | Symbols: FMA | FMA (FAMA); DNA binding /
transcription activator/ transcription factor | chr3:8715525-8717772
REVERSE
Length = 415
Score = 112 bits (280), Expect = 3e-025
Identities = 57/80 (71%), Positives = 65/80 (81%)
Frame = +3
Query: 588 SSKNKEEMENQRMTHIVVERNRRKQMNEYLAVLRSLMPTSYVQRGDQASIIGGAINFVKE 767
+SK EE+E+QRMTHI VERNRRKQMNE+L VLRSLMP SYVQRGDQASIIGGAI FV+E
Sbjct: 185 TSKTSEEVESQRMTHIAVERNRRKQMNEHLRVLRSLMPGSYVQRGDQASIIGGAIEFVRE 244
Query: 768 LEQLLQSMDGSHKSSTKPET 827
LEQLLQ ++ + ET
Sbjct: 245 LEQLLQCLESQKRRRILGET 264
>TAIR9_protein||AT3G61950.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:22939661-22941332 FORWARD
Length = 359
Score = 105 bits (260), Expect = 6e-023
Identities = 47/73 (64%), Positives = 63/73 (86%)
Frame = +3
Query: 591 SKNKEEMENQRMTHIVVERNRRKQMNEYLAVLRSLMPTSYVQRGDQASIIGGAINFVKEL 770
SKN EE+ENQR+ HI VERNRR+QMNE++ LR+L+P SY+QRGDQASI+GGAIN+VK L
Sbjct: 167 SKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVL 226
Query: 771 EQLLQSMDGSHKS 809
EQ++QS++ ++
Sbjct: 227 EQIIQSLESQKRT 239
>TAIR9_protein||AT3G61950.2 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr3:22940231-22941332 FORWARD
Length = 308
Score = 105 bits (260), Expect = 6e-023
Identities = 47/73 (64%), Positives = 63/73 (86%)
Frame = +3
Query: 591 SKNKEEMENQRMTHIVVERNRRKQMNEYLAVLRSLMPTSYVQRGDQASIIGGAINFVKEL 770
SKN EE+ENQR+ HI VERNRR+QMNE++ LR+L+P SY+QRGDQASI+GGAIN+VK L
Sbjct: 116 SKNNEEIENQRINHIAVERNRRRQMNEHINSLRALLPPSYIQRGDQASIVGGAINYVKVL 175
Query: 771 EQLLQSMDGSHKS 809
EQ++QS++ ++
Sbjct: 176 EQIIQSLESQKRT 188
>TAIR9_protein||AT2G46810.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr2:19239694-19242373 FORWARD
Length = 372
Score = 103 bits (255), Expect = 2e-022
Identities = 52/84 (61%), Positives = 67/84 (79%), Gaps = 3/84 (3%)
Frame = +3
Query: 591 SKNKEEMENQRMTHIVVERNRRKQMNEYLAVLRSLMPTSYVQRGDQASIIGGAINFVKEL 770
+KN EE+E+QRMTHI VERNRR+QMN +L LRS++P+SY+QRGDQASI+GGAI+FVK L
Sbjct: 182 TKNIEEIESQRMTHIAVERNRRRQMNVHLNSLRSIIPSSYIQRGDQASIVGGAIDFVKIL 241
Query: 771 EQLLQSMDG---SHKSSTKPETVP 833
EQ LQS++ S +S E +P
Sbjct: 242 EQQLQSLEAQKRSQQSDDNKEQIP 265
>TAIR9_protein||AT5G46690.1 | Symbols: bHLH071 | bHLH071 (beta HLH protein 71);
DNA binding / transcription factor | chr5:18945639-18947434 FORWARD
Length = 328
Score = 101 bits (249), Expect = 1e-021
Identities = 47/75 (62%), Positives = 60/75 (80%)
Frame = +3
Query: 594 KNKEEMENQRMTHIVVERNRRKQMNEYLAVLRSLMPTSYVQRGDQASIIGGAINFVKELE 773
KN+EE ENQRMTHI VERNRR+QMN++L+VLRSLMP + +GDQASI+GGAI+F+KELE
Sbjct: 78 KNEEEAENQRMTHIAVERNRRRQMNQHLSVLRSLMPQPFAHKGDQASIVGGAIDFIKELE 137
Query: 774 QLLQSMDGSHKSSTK 818
L S++ + K
Sbjct: 138 HKLLSLEAQKHHNAK 152
>TAIR9_protein||AT5G53210.1 | Symbols: SPCH | SPCH (SPEECHLESS); DNA binding /
transcription factor | chr5:21586606-21588941 REVERSE
Length = 365
Score = 94 bits (231), Expect = 1e-019
Identities = 50/116 (43%), Positives = 72/116 (62%), Gaps = 2/116 (1%)
Frame = +3
Query: 486 VKEWD-PHSSPEALETXXXXXXQAXXXXXXXXXXXSSKNKEEMENQRMTHIVVERNRRKQ 662
VK+ D +SSP+ + + NK++ + Q+M+H+ VERNRRKQ
Sbjct: 56 VKDQDYENSSPKRKKQRLETRKEEDEEEEDGDGEAEEDNKQDGQ-QKMSHVTVERNRRKQ 114
Query: 663 MNEYLAVLRSLMPTSYVQRGDQASIIGGAINFVKELEQLLQSMDGSHKSSTKPETV 830
MNE+L VLRSLMP YV+RGDQASIIGG + ++ EL+Q+LQS++ + T E +
Sbjct: 115 MNEHLTVLRSLMPCFYVKRGDQASIIGGVVEYISELQQVLQSLEAKKQRKTYAEVL 170
>TAIR9_protein||AT5G65320.1 | Symbols: | basic helix-loop-helix (bHLH) family
protein | chr5:26107368-26108640 REVERSE
Length = 297
Score = 89 bits (219), Expect = 3e-018
Identities = 43/75 (57%), Positives = 57/75 (76%)
Frame = +3
Query: 588 SSKNKEEMENQRMTHIVVERNRRKQMNEYLAVLRSLMPTSYVQRGDQASIIGGAINFVKE 767
S K + ENQRM HI VERNRRKQMN +L++L+S+MP SY Q DQASII G I+++K+
Sbjct: 90 SEKTIVDKENQRMNHIAVERNRRKQMNHFLSILKSMMPLSYSQPNDQASIIEGTISYLKK 149
Query: 768 LEQLLQSMDGSHKSS 812
LEQ LQS++ K++
Sbjct: 150 LEQRLQSLEAQLKAT 164
>TAIR9_protein||AT3G06120.1 | Symbols: MUTE | MUTE (MUTE); DNA binding /
transcription factor | chr3:1846531-1848016 FORWARD
Length = 203
Score = 84 bits (206), Expect = 1e-016
Identities = 39/64 (60%), Positives = 50/64 (78%)
Frame = +3
Query: 624 MTHIVVERNRRKQMNEYLAVLRSLMPTSYVQRGDQASIIGGAINFVKELEQLLQSMDGSH 803
M+HI VERNRR+QMNE+L LRSL P Y++RGDQASIIGG I F+KEL+QL+Q ++
Sbjct: 1 MSHIAVERNRRRQMNEHLKSLRSLTPCFYIKRGDQASIIGGVIEFIKELQQLVQVLESKK 60
Query: 804 KSST 815
+ T
Sbjct: 61 RRKT 64
>TAIR9_protein||AT2G16910.1 | Symbols: AMS | AMS (ABORTED MICROSPORES); DNA
binding / transcription factor | chr2:7331721-7334077 FORWARD
Length = 572
Score = 51 bits (120), Expect = 9e-007
Identities = 26/75 (34%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Frame = +3
Query: 600 KEEMENQRMTHIVVERNRRKQMNEYLAVLRSLMPTSYVQRGDQASIIGGAINFVKELEQL 779
K+ + + +++ ER RRK++N+ L LRSL+P + + D+ASI+G AIN+VKEL+
Sbjct: 305 KKSGKGSQAKNLMAERRRRKKLNDRLYALRSLVPR--ITKLDRASILGDAINYVKELQNE 362
Query: 780 LQSMDGSHKSSTKPE 824
+ + + +++ E
Sbjct: 363 AKELQDELEENSETE 377
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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