BLASTX 7.6.2
Query= RU44650 /QuerySize=764
(763 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcripti... 186 1e-047
TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 91 9e-019
TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 91 9e-019
TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH ... 91 9e-019
TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 90 1e-018
TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 90 1e-018
TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3... 90 1e-018
TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 87 1e-017
TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 87 1e-017
TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, N... 87 1e-017
TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 85 4e-017
TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 85 4e-017
TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4... 85 4e-017
TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 |... 85 4e-017
TAIR9_protein||AT2G34450.1 | Symbols: | high mobility group (HM... 79 4e-015
TAIR9_protein||AT2G34450.2 | Symbols: | high mobility group (HM... 75 4e-014
TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HM... 62 3e-010
TAIR9_protein||AT5G23405.1 | Symbols: | high mobility group (HM... 56 2e-008
TAIR9_protein||AT5G23405.2 | Symbols: | high mobility group (HM... 56 2e-008
TAIR9_protein||AT3G28730.1 | Symbols: ATHMG, SSRP1, NFD | ATHMG ... 56 2e-008
>TAIR9_protein||AT5G23420.1 | Symbols: HMGB6 | HMGB6; transcription factor |
chr5:7888712-7890111 REVERSE
Length = 242
Score = 186 bits (472), Expect = 1e-047
Identities = 101/180 (56%), Positives = 120/180 (66%), Gaps = 4/180 (2%)
Frame = +3
Query: 60 MGSGSIKSNPTRSRKRVEATAEDSAGPSLLRGKDGSAFARCDGCQKNVPVALISFHNCSL 239
M S SN + RKRVEA + +L R KDGSAFA C+GC K+V VALIS HNCSL
Sbjct: 1 MAGPSTTSNAPKQRKRVEAETSSNTSTTLRRAKDGSAFALCEGCNKSVAVALISMHNCSL 60
Query: 240 DAKIKTNLEAQVVEKPSEVTKKPPTERKKSSQ-PNAKRAK--TDKVNKSKDPNAPKRPLT 410
DAKI+ NLEAQVVE +E KKP ++K +S P KR K D+ S N PKRPLT
Sbjct: 61 DAKIRVNLEAQVVETQAEAKKKPAEKKKTTSDGPKPKRLKKTNDEKKSSSTSNKPKRPLT 120
Query: 411 AFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
AFF+FM+DFRK +K + S K AK GGEKW +T+EEKK Y+DKAAELK EY K+L
Sbjct: 121 AFFIFMSDFRKTFKSEHNGSL-AKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSL 179
>TAIR9_protein||AT3G51880.1 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 91 bits (223), Expect = 9e-019
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Frame = +3
Query: 246 KIKTNLEAQVVEKPSEVTKKPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLF 425
K+KT EA KP V + +RK ++ KR + KDPN PKR +AFF+F
Sbjct: 9 KVKTTKEAL---KP--VDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVF 63
Query: 426 MNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
+ DFR +K+ NP+ K V V K GG+KW M+ EK PY +KAA+ K EY+K +
Sbjct: 64 LEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQM 118
>TAIR9_protein||AT3G51880.2 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 186
Score = 91 bits (223), Expect = 9e-019
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Frame = +3
Query: 246 KIKTNLEAQVVEKPSEVTKKPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLF 425
K+KT EA KP V + +RK ++ KR + KDPN PKR +AFF+F
Sbjct: 9 KVKTTKEAL---KP--VDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVF 63
Query: 426 MNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
+ DFR +K+ NP+ K V V K GG+KW M+ EK PY +KAA+ K EY+K +
Sbjct: 64 LEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQM 118
>TAIR9_protein||AT3G51880.3 | Symbols: HMGB1, NFD1 | HMGB1 (HIGH MOBILITY GROUP
B 1); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr3:19247241-19248491 REVERSE
Length = 179
Score = 91 bits (223), Expect = 9e-019
Identities = 49/115 (42%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Frame = +3
Query: 246 KIKTNLEAQVVEKPSEVTKKPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLF 425
K+KT EA KP V + +RK ++ KR + KDPN PKR +AFF+F
Sbjct: 9 KVKTTKEAL---KP--VDDRKVGKRKAPAEKPTKRETRKEKKAKKDPNKPKRAPSAFFVF 63
Query: 426 MNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
+ DFR +K+ NP+ K V V K GG+KW M+ EK PY +KAA+ K EY+K +
Sbjct: 64 LEDFRVTFKKENPNVKAVSAVGKAGGQKWKSMSQAEKAPYEEKAAKRKAEYEKQM 118
>TAIR9_protein||AT1G20696.1 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181174 FORWARD
Length = 142
Score = 90 bits (222), Expect = 1e-018
Identities = 43/96 (44%), Positives = 57/96 (59%)
Frame = +3
Query: 303 KPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVK 482
K E + + K+ +KDPN PKRP +AFF+FM DFR YKE +P +K V
Sbjct: 5 KSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVA 64
Query: 483 MVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
V K GGEKW ++D EK PY+ KA + K EY+K +
Sbjct: 65 AVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNM 100
>TAIR9_protein||AT1G20696.2 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181193 FORWARD
Length = 148
Score = 90 bits (222), Expect = 1e-018
Identities = 43/96 (44%), Positives = 57/96 (59%)
Frame = +3
Query: 303 KPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVK 482
K E + + K+ +KDPN PKRP +AFF+FM DFR YKE +P +K V
Sbjct: 5 KSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVA 64
Query: 483 MVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
V K GGEKW ++D EK PY+ KA + K EY+K +
Sbjct: 65 AVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNM 100
>TAIR9_protein||AT1G20696.3 | Symbols: HMGB3, NFD3, NFD03 | HMGB3 (HIGH MOBILITY
GROUP B 3); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr1:7179825-7181170 FORWARD
Length = 141
Score = 90 bits (222), Expect = 1e-018
Identities = 43/96 (44%), Positives = 57/96 (59%)
Frame = +3
Query: 303 KPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVK 482
K E + + K+ +KDPN PKRP +AFF+FM DFR YKE +P +K V
Sbjct: 5 KSKAETRSTKLSVTKKPAKGAKGAAKDPNKPKRPSSAFFVFMEDFRVTYKEEHPKNKSVA 64
Query: 483 MVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
V K GGEKW ++D EK PY+ KA + K EY+K +
Sbjct: 65 AVGKAGGEKWKSLSDSEKAPYVAKADKRKVEYEKNM 100
>TAIR9_protein||AT1G20693.1 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 145
Score = 87 bits (213), Expect = 1e-017
Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Frame = +3
Query: 303 KPPTERKKS----SQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDS 470
K TE + S ++ AK A K +KDPN PKRP +AFF+FM DFR+ +K+ NP +
Sbjct: 5 KSKTETRSSKLSVTKKPAKGAGRGKA-AAKDPNKPKRPASAFFVFMEDFRETFKKENPKN 63
Query: 471 KGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
K V V K G+KW ++D EK PY+ KA + K EY+K +
Sbjct: 64 KSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNI 103
>TAIR9_protein||AT1G20693.2 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 143
Score = 87 bits (213), Expect = 1e-017
Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Frame = +3
Query: 303 KPPTERKKS----SQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDS 470
K TE + S ++ AK A K +KDPN PKRP +AFF+FM DFR+ +K+ NP +
Sbjct: 5 KSKTETRSSKLSVTKKPAKGAGRGKA-AAKDPNKPKRPASAFFVFMEDFRETFKKENPKN 63
Query: 471 KGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
K V V K G+KW ++D EK PY+ KA + K EY+K +
Sbjct: 64 KSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNI 103
>TAIR9_protein||AT1G20693.3 | Symbols: HMGB2, HMG BETA 1, NFD2, NFD02 | HMGB2
(HIGH MOBILITY GROUP B 2); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor | chr1:7177282-7178487
FORWARD
Length = 144
Score = 87 bits (213), Expect = 1e-017
Identities = 45/100 (45%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Frame = +3
Query: 303 KPPTERKKS----SQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDS 470
K TE + S ++ AK A K +KDPN PKRP +AFF+FM DFR+ +K+ NP +
Sbjct: 5 KSKTETRSSKLSVTKKPAKGAGRGKA-AAKDPNKPKRPASAFFVFMEDFRETFKKENPKN 63
Query: 471 KGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
K V V K G+KW ++D EK PY+ KA + K EY+K +
Sbjct: 64 KSVATVGKAAGDKWKSLSDSEKAPYVAKAEKRKVEYEKNI 103
>TAIR9_protein||AT2G17560.1 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 85 bits (209), Expect = 4e-017
Identities = 45/96 (46%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Frame = +3
Query: 315 ERKKSSQPNAKRAKT--DKVNK--SKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVK 482
E K + +R KT K K KDPN PKRP +AFF+F+ DFRK + ANP++K V
Sbjct: 5 ESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVA 64
Query: 483 MVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
V K G +W MTDE+K PY+ KA K EY K +
Sbjct: 65 TVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNV 100
>TAIR9_protein||AT2G17560.2 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 139
Score = 85 bits (209), Expect = 4e-017
Identities = 45/96 (46%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Frame = +3
Query: 315 ERKKSSQPNAKRAKT--DKVNK--SKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVK 482
E K + +R KT K K KDPN PKRP +AFF+F+ DFRK + ANP++K V
Sbjct: 5 ESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVA 64
Query: 483 MVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
V K G +W MTDE+K PY+ KA K EY K +
Sbjct: 65 TVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNV 100
>TAIR9_protein||AT2G17560.3 | Symbols: HMGB4, NFD4, NFD04 | HMGB4 (HIGH MOBILITY
GROUP B 4); DNA binding / chromatin binding / structural constituent of
chromatin / transcription factor | chr2:7642486-7643468 REVERSE
Length = 135
Score = 85 bits (209), Expect = 4e-017
Identities = 45/96 (46%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Frame = +3
Query: 315 ERKKSSQPNAKRAKT--DKVNK--SKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVK 482
E K + +R KT K K KDPN PKRP +AFF+F+ DFRK + ANP++K V
Sbjct: 5 ESKAEATSTDQRLKTRGRKAGKKTKKDPNQPKRPPSAFFVFLEDFRKEFNLANPNNKSVA 64
Query: 483 MVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
V K G +W MTDE+K PY+ KA K EY K +
Sbjct: 65 TVGKAAGARWKAMTDEDKAPYVAKAESRKTEYIKNV 100
>TAIR9_protein||AT4G35570.1 | Symbols: HMGB5, NFD5, HMGD, NFD05 | HMGB5 (HIGH
MOBILITY GROUP B 5); DNA binding / chromatin binding / structural
constituent of chromatin / transcription factor |
chr4:16887363-16888184 REVERSE
Length = 126
Score = 85 bits (209), Expect = 4e-017
Identities = 41/98 (41%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Frame = +3
Query: 300 KKPPTERKKSSQPNAKRAKTDKV-NKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKG 476
K TE + S + + + +KV K+KDPN PK+P + FF+F++DFRK + ANPD+K
Sbjct: 2 KDNQTEVESRSTDDRLKVRGNKVGKKTKDPNRPKKPPSPFFVFLDDFRKEFNLANPDNKS 61
Query: 477 VKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
V V + G+KW MT+EE+ P++ K+ K EY T+
Sbjct: 62 VGNVGRAAGKKWKTMTEEERAPFVAKSQSKKTEYAVTM 99
>TAIR9_protein||AT2G34450.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr2:14527918-14529448 REVERSE
Length = 152
Score = 79 bits (192), Expect = 4e-015
Identities = 39/105 (37%), Positives = 59/105 (56%), Gaps = 5/105 (4%)
Frame = +3
Query: 291 EVTKKPPTERKKSSQPNAKRAKTDKVNKSKDP-----NAPKRPLTAFFLFMNDFRKAYKE 455
E+ K ++S++ + + K + K P PK+P TAFF F++DFRK Y+E
Sbjct: 24 ELAVKSSEGARRSTRLRLQPLRKPKTSPKKKPVKLQTKMPKKPATAFFFFLDDFRKQYQE 83
Query: 456 ANPDSKGVKMVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
NPD K ++ + K GEKW MT EEK Y D A E ++E+ + +
Sbjct: 84 ENPDVKSMREIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHRAM 128
>TAIR9_protein||AT2G34450.2 | Symbols: | high mobility group (HMG1/2) family
protein | chr2:14527918-14529448 REVERSE
Length = 153
Score = 75 bits (183), Expect = 4e-014
Identities = 39/106 (36%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
Frame = +3
Query: 291 EVTKKPPTERKKSSQPNAKRAKTDKVNKSKDP-----NAPKRPLTAFFLFMNDFRKAYKE 455
E+ K ++S++ + + K + K P PK+P TAFF F++DFRK Y+E
Sbjct: 24 ELAVKSSEGARRSTRLRLQPLRKPKTSPKKKPVKLQTKMPKKPATAFFFFLDDFRKQYQE 83
Query: 456 ANPDSKGVK-MVAKEGGEKWNLMTDEEKKPYMDKAAELKDEYKKTL 590
NPD K ++ ++ K GEKW MT EEK Y D A E ++E+ + +
Sbjct: 84 ENPDVKSMREVIGKTCGEKWKTMTYEEKVKYYDIATEKREEFHRAM 129
>TAIR9_protein||AT4G11080.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr4:6760898-6763272 REVERSE
Length = 447
Score = 62 bits (150), Expect = 3e-010
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Frame = +3
Query: 351 AKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTDE 530
AK K N++ DPN PK+P +++FLF D RK+ E +P V KW + +E
Sbjct: 358 AKNKKKNENVDPNKPKKPTSSYFLFCKDARKSVLEEHPGINN-STVTAHISLKWMELGEE 416
Query: 531 EKKPYMDKAAELKDEYKK 584
EK+ Y KAAEL + YKK
Sbjct: 417 EKQVYNSKAAELMEAYKK 434
>TAIR9_protein||AT5G23405.1 | Symbols: | high mobility group (HMG1/2) family
protein | chr5:7883097-7884243 REVERSE
Length = 150
Score = 56 bits (134), Expect = 2e-008
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Frame = +3
Query: 348 RAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTD 527
+AK NK K + LT F +FMN FRK+++ + + VK +K G E W MT+
Sbjct: 52 QAKKKPTNKKKSTTS----LTDFAVFMNHFRKSFR-TDYNGALVKEGSKIGWEMWKSMTE 106
Query: 528 EEKKPYMDKAAELKDEYKKTL 590
+EKK Y+DKAA+ +DE + T+
Sbjct: 107 DEKKDYLDKAADEEDEDEDTV 127
>TAIR9_protein||AT5G23405.2 | Symbols: | high mobility group (HMG1/2) family
protein | chr5:7883097-7884243 REVERSE
Length = 149
Score = 56 bits (134), Expect = 2e-008
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
Frame = +3
Query: 348 RAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEANPDSKGVKMVAKEGGEKWNLMTD 527
+AK NK K + LT F +FMN FRK+++ + + VK +K G E W MT+
Sbjct: 51 QAKKKPTNKKKSTTS----LTDFAVFMNHFRKSFR-TDYNGALVKEGSKIGWEMWKSMTE 105
Query: 528 EEKKPYMDKAAELKDEYKKTL 590
+EKK Y+DKAA+ +DE + T+
Sbjct: 106 DEKKDYLDKAADEEDEDEDTV 126
>TAIR9_protein||AT3G28730.1 | Symbols: ATHMG, SSRP1, NFD | ATHMG (ARABIDOPSIS
THALIANA HIGH MOBILITY GROUP); transcription factor |
chr3:10784954-10788498 FORWARD
Length = 647
Score = 56 bits (133), Expect = 2e-008
Identities = 36/103 (34%), Positives = 52/103 (50%), Gaps = 6/103 (5%)
Frame = +3
Query: 279 EKPSEVTKKPPTERKKSSQPNAKRAKTDKVNKSKDPNAPKRPLTAFFLFMNDFRKAYKEA 458
+K + +K P +RK + +K K K KDPNAPKR ++ F F R K+
Sbjct: 525 KKEASSSKGLPPKRKTVAADEGS-SKRKKPKKKKDPNAPKRAMSGFMFFSQMERDNIKKE 583
Query: 459 NPDSKGVKM--VAKEGGEKWNLMTDEEKKPYMDKAAELKDEYK 581
+P G+ V K G+KW M+ ++K+PY KA K YK
Sbjct: 584 HP---GIAFGEVGKVLGDKWRQMSADDKEPYEAKAQVDKQRYK 623
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
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