BLASTX 7.6.2
Query= RU44932 /QuerySize=408
(407 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G59240.1 | Symbols: | 40S ribosomal protein S... 153 6e-038
TAIR9_protein||AT5G20290.1 | Symbols: | 40S ribosomal protein S... 149 8e-037
>TAIR9_protein||AT5G59240.1 | Symbols: | 40S ribosomal protein S8 (RPS8B) |
chr5:23902626-23903670 REVERSE
Length = 211
Score = 153 bits (384), Expect = 6e-038
Identities = 79/103 (76%), Positives = 81/103 (78%)
Frame = +3
Query: 87 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 266
MGISRDS+H YELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1 MGISRDSIHKRRATGGKQKMWRKKRKYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 267 LDTGFFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLCLGAIV 395
LDTG FSWGSEAVTRKTR+LDV YNASNNELVRTQTL AIV
Sbjct: 61 LDTGNFSWGSEAVTRKTRILDVAYNASNNELVRTQTLVKSAIV 103
>TAIR9_protein||AT5G20290.1 | Symbols: | 40S ribosomal protein S8 (RPS8A) |
chr5:6851695-6853012 REVERSE
Length = 223
Score = 149 bits (374), Expect = 8e-037
Identities = 76/103 (73%), Positives = 81/103 (78%)
Frame = +3
Query: 87 MGISRDSMHXXXXXXXXXXXXXXXXXYELGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 266
MGISRDS+H YE+GRQPANTKLSSNKTVRRIRVRGGNVKWRALR
Sbjct: 1 MGISRDSIHKRRATGGKQKQWRKKRKYEMGRQPANTKLSSNKTVRRIRVRGGNVKWRALR 60
Query: 267 LDTGFFSWGSEAVTRKTRLLDVVYNASNNELVRTQTLCLGAIV 395
LDTG +SWGSEA TRKTR+LDVVYNASNNELVRT+TL AIV
Sbjct: 61 LDTGNYSWGSEATTRKTRVLDVVYNASNNELVRTKTLVKSAIV 103
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,954,139,568
Number of Sequences: 33410
Number of Extensions: 5954139568
Number of Successful Extensions: 327327827
Number of sequences better than 0.0: 0
|